BAC Information

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BAC

Clone NameB6Ng01-022P15
ChromosomeX (Build37)
Map Location 49,374,810 - 49,492,264
singlet/doubletdoublet
Overlap geneGpc4
Upstream geneLOC385355, Mbnl3, LOC665866, LOC385356, Hs6st2, Usp26, LOC100040479, LOC665888, 1700080O16Rik, LOC100040495
Downstream geneGpc3, Kis2, LOC100041925, LOC665929, 6330534C20Rik, LOC624936, LOC546298, LOC100040569, Phf6, Hprt1, C430049B03Rik, Plac1
LinkOpen Mouse BAC browser

no map image available.



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-022P15.bB6Ng01-022P15.g
ACCDH855027DH855028
length9771,112
definitionDH855027|Mus musculus domesticus DNA, BAC clone: B6Ng01-022P15, 5' end.DH855028|Mus musculus domesticus DNA, BAC clone: B6Ng01-022P15, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(49,374,810 - 49,375,326)(49,491,126 - 49,492,264)
sequence
gaattctttgtgtctatatcaaaaattcatgggacagcagatgctggcaa
ggatgtggagaaagaggaacactcctccattgttggtgggattgcaagct
tgtacagccactctggaaatcagtctggcggttcctcagaaaattggaca
tagtactaccggaagatccagtaatacctctcctgggcatatatccagaa
gaagccccaactggtaagaaggacacatgctccactatgttcatagcagc
cttatttataatagccagaagctggaaagaacccagatgcccctcaacag
aagaacggatacagaaaatgtggtacatttacacaatggagtactactca
gctattaaaaagaatgaatttatgaaattcctaggcaaatggatggattt
ggagggcatcatcctgagtgaggtaacccaatcacaaaagaactcacatg
atatgcactcactaataagtgataagtggatattagcccagaaacttaga
atacccaaaatacaatttgcaaaacacatgaaactcaagcagaacgaaga
ccaaagtgtggacacttcgccccttcttagaatagggaacaaaacaccca
tggaaggaattacagagacaaagtttggaactgagacgaaaggatagacc
atccagagactgtccccccatggggcggggggatccatctcataatcagc
caccaaacacagacactattgcatacgccagcaagattttgctgaaagga
ccctgatatagctgtctcttgtgaggctatgctagtgcctggcaaacaca
gaagtggatgctcacagtcagctattggatggaacacggggtccccaatg
gaggagctagagaaagtacccaaggagctaaagggatctgcaaccctata
ggtggaacaacaatatgaactacccagtacccccagagctcgtgtctcta
gctgcatatatagcaaaagatggccta
gaattctatctcagagggcaagagggaaagaaaaagaaaaagaaaaagaa
aaagaaaaagaaaaagaaaaagaaaaaaaaaacccagaaggaattaatgt
cactatgaggattgtcagcccatgcaattgaaagctacttctgctttcat
cagtgcagttgaaaggatatactgagagatcagcagccttggagcccacc
ccaaggacaagtgccaggcttcctccatagccagccttatccataaagtc
tcttgatgcttatgaaccaaggctactgtactatggccaagtaagattta
gtggccatatgtgaaagcagaatcctgtcaatacacagcagatcataagt
caaggctgatgtaaacacctgctcttgagtactgcagccatttctccttt
aggagagattccaacttctgccagcaccagtgtgtcagatggcatggaat
tccctgatctaaccctcagaaagaggggctagcgcttggctactgcctcc
ctcaaccatgagagacagaatctggtctataatggccgtgagaattagct
caaaagtccaaaaacaccaggtggactaacatgtgggctttttttttttt
tttgccctgtccctaaaaacctaattctgtataaaattgcccatcttctc
agaaaacataaacttaacagactagaaaccgggggtggagtaggactcct
ttgtcctgggagaatagtacttttacttcaagtgtatcagagcaaattag
gactattattagtgctttgaacagcatgctagtgattgagcaggccctta
aaacaagggagcctacggcttctgaatagacagatctctgagtgaatagc
cacctctcaggttgttctttagtctccgagaatatgcacctgcctctcat
ttccattatgtcatagggctgcatatcacatgctacacagcatcatcaag
gtctttatgctgtcttttgaagggataaaatcacgttcctttcatctcct
ggagacgtatgtgtaaatgaaaaaatcttgtgctgggccactactccaga
taagtcctgagaatgtgctagctattctatggaaacagcaggccggttct
ttgttaacattt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_49374810_49375326
seq2: B6Ng01-022P15.b_47_563

seq1  GAATTCTTTGTGTCTATATCAAAAATTCATGGGACAGCAGATGCTGGCAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGTGTCTATATCAAAAATTCATGGGACAGCAGATGCTGGCAA  50

seq1  GGATGTGGAGAAAGAGGAACACTCCTCCATTGTTGGTGGGATTGCAAGCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGTGGAGAAAGAGGAACACTCCTCCATTGTTGGTGGGATTGCAAGCT  100

seq1  TGTACAGCCACTCTGGAAATCAGTCTGGCGGTTCCTCAGAAAATTGGACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACAGCCACTCTGGAAATCAGTCTGGCGGTTCCTCAGAAAATTGGACA  150

seq1  TAGTACTACCGGAAGATCCAGTAATACCTCTCCTGGGCATATATCCAGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTACTACCGGAAGATCCAGTAATACCTCTCCTGGGCATATATCCAGAA  200

seq1  GAAGCCCCAACTGGTAAGAAGGACACATGCTCCACTATGTTCATAGCAGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCCCCAACTGGTAAGAAGGACACATGCTCCACTATGTTCATAGCAGC  250

seq1  CTTATTTATAATAGCCAGAAGCTGGAAAGAACCCAGATGCCCCTCAACAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATTTATAATAGCCAGAAGCTGGAAAGAACCCAGATGCCCCTCAACAG  300

seq1  AAGAACGGATACAGAAAATGTGGTACATTTACACAATGGAGTACTACTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAACGGATACAGAAAATGTGGTACATTTACACAATGGAGTACTACTCA  350

seq1  GCTATTAAAAAGAATGAATTTATGAAATTCCTAGGCAAATGGATGGATTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTATTAAAAAGAATGAATTTATGAAATTCCTAGGCAAATGGATGGATTT  400

seq1  GGAGGGCATCATCCTGAGTGAGGTAACCCAATCACAAAAGAACTCACATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGGCATCATCCTGAGTGAGGTAACCCAATCACAAAAGAACTCACATG  450

seq1  ATATGCACTCACTAATAAGTGATAAGTGGATATTAGCCCAGAAACTTAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGCACTCACTAATAAGTGATAAGTGGATATTAGCCCAGAAACTTAGA  500

seq1  ATACCCAAAATACAATT  517
      |||||||||||||||||
seq2  ATACCCAAAATACAATT  517

seq1: chrX_49491126_49492264
seq2: B6Ng01-022P15.g_70_1181 (reverse)

seq1  AAATGTTTAAACAAAGAACACGGACTTGCTTGTTTCAATTAGAATTAGGC  50
      |||||||  |||||||||| ||| | ||| |||||| | ||||||   ||
seq2  AAATGTT--AACAAAGAAC-CGG-CCTGC-TGTTTCCA-TAGAAT--AGC  42

seq1  TAGGCACATTCTCAGGAAACTTTATCTGGGAAGTAAGTGGGCACAGCACA  100
      || ||||||||||||||    ||||||||  ||| ||| ||| |||||||
seq2  TA-GCACATTCTCAGGA---CTTATCTGG--AGT-AGT-GGCCCAGCACA  84

seq1  AGGACTCTTTTCATTTTAACACATAACGTCTTCAGGAGAATGAAAGGGAC  150
      ||   | |||||||||  |||||| |||||| |||||| |||||||| ||
seq2  AG--ATTTTTTCATTT--ACACAT-ACGTCTCCAGGAG-ATGAAAGGAAC  128

seq1  GTGATTTTATTCCCTTTCAAAAGACAGCAATAAAGACCCTGATGATGCTG  200
      ||||||||||  || ||||||||||||| ||||||||| |||||||||||
seq2  GTGATTTTAT--CCCTTCAAAAGACAGC-ATAAAGACCTTGATGATGCTG  175

seq1  TGTAGCATGTGATATGCAGCCCCTAATGACATTAATGGAAATGAGAGGCA  250
      ||||||||||||||||||||||   |||||| ||||||||||||||||||
seq2  TGTAGCATGTGATATGCAGCCC--TATGACA-TAATGGAAATGAGAGGCA  222

seq1  GGTGCATATTCTCGGAGACTAAAGAACAACCTGAGAGGTGGCTATTCACT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGCATATTCTCGGAGACTAAAGAACAACCTGAGAGGTGGCTATTCACT  272

seq1  CAGAGATCTGTCTATTCAGAAGCCGTAGGCTCCCTTGTTTTAAGGGCCTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGATCTGTCTATTCAGAAGCCGTAGGCTCCCTTGTTTTAAGGGCCTG  322

seq1  CTCAATCACTAGCATGCTGTTC-AAGCACTAATAATAGTCCTAATTTGCT  399
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  CTCAATCACTAGCATGCTGTTCAAAGCACTAATAATAGTCCTAATTTGCT  372

seq1  CTGATACACTTGAAGTAAAAGTACTATTCTCCCAGGACAAAGGAGTCCTA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATACACTTGAAGTAAAAGTACTATTCTCCCAGGACAAAGGAGTCCTA  422

seq1  CTCCACCCCCGGTTTCTAGTCTGTTAAGTTTATGTTTTCTGAGAAGATGG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCACCCCCGGTTTCTAGTCTGTTAAGTTTATGTTTTCTGAGAAGATGG  472

seq1  GCAATTTTATACAGAATTAGGTTTTTAGGGACAGGGCAAAAAAAAAAAAA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAATTTTATACAGAATTAGGTTTTTAGGGACAGGGCAAAAAAAAAAAAA  522

seq1  AAGCCCACATGTTAGTCCACCTGGTGTTTTTGGACTTTTGAGCTAATTCT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCCACATGTTAGTCCACCTGGTGTTTTTGGACTTTTGAGCTAATTCT  572

seq1  CACGGCCATTATAGACCAGATTCTGTCTCTCATGGTTGAGGGAGGCAGTA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACGGCCATTATAGACCAGATTCTGTCTCTCATGGTTGAGGGAGGCAGTA  622

seq1  GCCAAGCGCTAGCCCCTCTTTCTGAGGGTTAGATCAGGGAATTCCATGCC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAAGCGCTAGCCCCTCTTTCTGAGGGTTAGATCAGGGAATTCCATGCC  672

seq1  ATCTGACACACTGGTGCTGGCAGAAGTTGGAATCTCTCCTAAAGGAGAAA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGACACACTGGTGCTGGCAGAAGTTGGAATCTCTCCTAAAGGAGAAA  722

seq1  TGGCTGCAGTACTCAAGAGCAGGTGTTTACATCAGCCTTGACTTATGATC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTGCAGTACTCAAGAGCAGGTGTTTACATCAGCCTTGACTTATGATC  772

seq1  TGCTGTGTATTGACAGGATTCTGCTTTCACATATGGCCACTAAATCTTAC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGTGTATTGACAGGATTCTGCTTTCACATATGGCCACTAAATCTTAC  822

seq1  TTGGCCATAGTACAGTAGCCTTGGTTCATAAGCATCAAGAGACTTTATGG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGCCATAGTACAGTAGCCTTGGTTCATAAGCATCAAGAGACTTTATGG  872

seq1  ATAAGGCTGGCTATGGAGGAAGCCTGGCACTTGTCCTTGGGGTGGGCTCC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGGCTGGCTATGGAGGAAGCCTGGCACTTGTCCTTGGGGTGGGCTCC  922

seq1  AAGGCTGCTGATCTCTCAGTATATCCTTTCAACTGCACTGATGAAAGCAG  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCTGCTGATCTCTCAGTATATCCTTTCAACTGCACTGATGAAAGCAG  972

seq1  AAGTAGCTTTCAATTGCATGGGCTGACAATCCTCATAGTGACATTAATTC  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTAGCTTTCAATTGCATGGGCTGACAATCCTCATAGTGACATTAATTC  1022

seq1  CTTCTGGGTTTTTTTTTTCTTTTTCTTTTTCTTTTTCTTTTTCTTTTTCT  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTGGGTTTTTTTTTTCTTTTTCTTTTTCTTTTTCTTTTTCTTTTTCT  1072

seq1  TTTTCTTTTTCTTTCCCTCTTGCCCTCTGAGATAGAATTC  1139
      ||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTTTTTCTTTCCCTCTTGCCCTCTGAGATAGAATTC  1112