BAC Information

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BAC

Clone NameB6Ng01-023G10
ChromosomeX (Build37)
Map Location 46,576,501 - 46,742,524
singlet/doubletdoublet
Overlap geneEnox2
Upstream geneUtp14a, LOC637576, Bcorl1, Elf4, Aifm1, Rab33a, Suhw3, Slc25a14, Gpr119, Rbmx2, LOC665752, Gm595, EG637758, LOC100040295
Downstream gene1100001E04Rik, LOC100041697, Olfr1320, Olfr1321, Igsf1, Olfr1322, LOC100040344, Olfr1323, EG665816
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-023G10.bB6Ng01-023G10.g
ACCDH855332DH855333
length1,007449
definitionDH855332|Mus musculus domesticus DNA, BAC clone: B6Ng01-023G10, 5' end.DH855333|Mus musculus domesticus DNA, BAC clone: B6Ng01-023G10, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(46,576,501 - 46,577,528)(46,742,071 - 46,742,524)
sequence
gaattcccagagagctcatttttttcctgagttactttattttattttag
aaaagtcgacaaagaaaaatggatagaggctacggcagagagagaaagac
ttagctatttattaagttatatctctgtgttatttttctcatggcatgct
tgctgttcatgattttaaattatatgaatcccttatgcttctagtgagta
tgctatatgacttcaccgatggcttttgtaactgactaataataaaaata
caaaagtatctgaatagtacaggatattattgcaggactggaaatgaaag
aatcatatggcaggttaatgcaaggaattattaatataaaatgagagagt
tggagtttaaaagagggtacttaattcatttggattataaattattatga
ttagaaaagagaaccccagaggttaattagtttttatcagtgggtttctt
tggactttgtctactggtttctctgtttcttcaaacacctgcttttttct
gtcagcttataattccccatgcctagatctcatttacgtggtaagaaaaa
tgaaatctaaaactgatgacattgcccagttggcacagtgctttctgggc
tcacacaaagccctaggttacatccctagcactgcatagacaaggtgtga
tgctatccacctggaagaggtgaaagcagacacgttaggagttcaaagtc
atcatcatgtacatagtgattttggaactagcctaggactcatgaaagcc
tgtctttgaaagagtataaatgattactaacatacatgtatgcccagcac
tttcataaggtgagttatagtcttctaaagttatcttacttttaactttg
tcttcacagcatgctgacaatagcacctagatgttgcataataatttagg
tggggatactctcttttaaatttttttacctcctaatccattccggctcc
ctccaccacctccaaagctcacgttccaacctcctcactcttaacccttc
tcacatg
catgtagttgaaagaagaaggggagagaggggggggggcaaggaggaagg
aagaagaaaagaaaatcccttatttaagcagtatgtcattcagttttaca
agaagctaagcttacaaggggaagggtgtgggaaagaggtggatgataca
tgactatgtagtggtttctgtcaactctacatgcaccaatgcagattcac
acagtacatatttacctacccttcagttgcccattagatgaggctcatta
tcagttcaaagagtaattgtttggggttgcagctgccatgtgcagcctga
ttgcagtggtctgtacagtctaaaacggagtgaggaatgacatcattatt
ttctcctcctcctgttcagctgtaagccattttttcctggttgtctctgt
cacactttgaacatttattgttcactttctgttgctatgttcattgcca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_46576501_46577528
seq2: B6Ng01-023G10.b_41_1047

seq1  GAATTCCCAGAGAGCTCATTTTTTTCCTGAGTTACTTTATTTTATTTTAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCAGAGAGCTCATTTTTTTCCTGAGTTACTTTATTTTATTTTAG  50

seq1  AAAAGTCGACAAAGAAAAATGGATAGAGGCTACGGCAGAGAGAGAAAGAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGTCGACAAAGAAAAATGGATAGAGGCTACGGCAGAGAGAGAAAGAC  100

seq1  TTAGCTATTTATTAAGTTATATCTCTGTGTTATTTTTCTCATGGCATGCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCTATTTATTAAGTTATATCTCTGTGTTATTTTTCTCATGGCATGCT  150

seq1  TGCTGTTCATGATTTTAAATTATATGAATCCCTTATGCTTCTAGTGAGTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGTTCATGATTTTAAATTATATGAATCCCTTATGCTTCTAGTGAGTA  200

seq1  TGCTATATGACTTCACCGATGGCTTTTGTAACTGACTAATAATAAAAATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTATATGACTTCACCGATGGCTTTTGTAACTGACTAATAATAAAAATA  250

seq1  CAAAAGTATCTGAATAGTACAGGATATTATTGCAGGACTGGAAATGAAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAGTATCTGAATAGTACAGGATATTATTGCAGGACTGGAAATGAAAG  300

seq1  AATCATATGGCAGGTTAATGCAAGGAATTATTAATATAAAATGAGAGAGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCATATGGCAGGTTAATGCAAGGAATTATTAATATAAAATGAGAGAGT  350

seq1  TGGAGTTTAAAAGAGGGTACTTAATTCATTTGGATTATAAATTATTATGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGTTTAAAAGAGGGTACTTAATTCATTTGGATTATAAATTATTATGA  400

seq1  TTAGAAAAGAGAACCCCAGAGGTTAATTAGTTTTTATCAGTGGGTTTCTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAAAAGAGAACCCCAGAGGTTAATTAGTTTTTATCAGTGGGTTTCTT  450

seq1  TGGACTTTGTCTACTGGTTTCTCTGTTTCTTCAAACACCTGCTTTTTTCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGACTTTGTCTACTGGTTTCTCTGTTTCTTCAAACACCTGCTTTTTTCT  500

seq1  GTCAGCTTATAATTCCCCATGCCTAGATCTCATTTACGTGGTAAGAAAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGCTTATAATTCCCCATGCCTAGATCTCATTTACGTGGTAAGAAAAA  550

seq1  TGAAATCTAAAACTGATGACATTGCCCAGTTGGCACAGTGCTTTCTGGGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAATCTAAAACTGATGACATTGCCCAGTTGGCACAGTGCTTTCTGGGC  600

seq1  TCACACAAAGCCCTAGGTTACATCCCTAGCACTGCATAGACAAGGTGTGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACACAAAGCCCTAGGTTACATCCCTAGCACTGCATAGACAAGGTGTGA  650

seq1  TGCTATCCACCTGGAAGAGGTGAAAGCAGACACGTTAGGAGTTCAAAGTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTATCCACCTGGAAGAGGTGAAAGCAGACACGTTAGGAGTTCAAAGTC  700

seq1  ATCATCATGTACATAGTGATTTTGGAACTAGCCTAGGACTCATGAAAGCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATCATGTACATAGTGATTTTGGAACTAGCCTAGGACTCATGAAAGCC  750

seq1  TGTCTTTGAAAGAGTATAAATGATTACTAACATACATGTATGCCCAGCAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTTTGAAAGAGTATAAATGATTACTAACATACATGTATGCCCAGCAC  800

seq1  TTTCATAAGGTGAGTTATAGTCTTCTAAAGTTATCTTACTTTTAACTTTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCATAAGGTGAGTTATAGTCTTCTAAAGTTATCTTACTTTTAACTTTG  850

seq1  TTCTTCACAGCATGCCTGACAATAGCACCTAGATGTTGCATAAATATATT  900
       ||||||||||||| |||||||||||||||||||||||||| |||| |||
seq2  -TCTTCACAGCATG-CTGACAATAGCACCTAGATGTTGCAT-AATA-ATT  896

seq1  TAGGTGGGGAATACCTCTCTTTTTAAATTTTTTTTACACTCCATATTCCA  950
      ||||||||| ||| |||||||||  || ||||||||| |||| || ||||
seq2  TAGGTGGGG-ATA-CTCTCTTTT--AAATTTTTTTAC-CTCC-TAATCCA  940

seq1  TTCCTGGCTCCCCTCCCATCCAC--CCTCCAAATGCTCCACGTTCCACAC  998
      |||| |||||||      |||||  |||||||| ||| ||||||||| ||
seq2  TTCC-GGCTCCC------TCCACCACCTCCAAA-GCT-CACGTTCCA-AC  980

seq1  CTCCTCCACACTC-TACCCCTTCTCCACATG  1028
      |||||   ||||| || ||||||| ||||||
seq2  CTCCT---CACTCTTAACCCTTCT-CACATG  1007

seq1: chrX_46742071_46742524
seq2: B6Ng01-023G10.g_72_526 (reverse)

seq1  TGGCAATGAACATAGCAACAGAAAGTGAACAATAAATGTTCAAAGTGTGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCAATGAACATAGCAACAGAAAGTGAACAATAAATGTTCAAAGTGTGA  50

seq1  CAGAGACAAACAGG-GGCTATGGCTTACAGCTGAACAGGAGGAGGAGAAA  99
      ||||||||| ||||     |||||||||||||||||||||||||||||||
seq2  CAGAGACAACCAGGAAAAAATGGCTTACAGCTGAACAGGAGGAGGAGAAA  100

seq1  ATAATGATGTCATTCCTCACTCCGTTTTAGACTGTACAGACCACTGCAAT  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATGATGTCATTCCTCACTCCGTTTTAGACTGTACAGACCACTGCAAT  150

seq1  CAGGCTGCACATGGCAGCTGCAACCCCAAACAATTACTCTTTGAACTGAT  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCTGCACATGGCAGCTGCAACCCCAAACAATTACTCTTTGAACTGAT  200

seq1  AATGAGCCTCATCTAATGGGCAACTGAAGGGTAGGTAAATATGTACTGTG  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAGCCTCATCTAATGGGCAACTGAAGGGTAGGTAAATATGTACTGTG  250

seq1  TGAATCTGCATTGGTGCATGTAGAGTTGACAGAAACCACTACATAGTCAT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATCTGCATTGGTGCATGTAGAGTTGACAGAAACCACTACATAGTCAT  300

seq1  GTATCATCCACCTCTTTCCCACACCCTTCCCCTTGTAAGCTTAGCTTCTT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATCATCCACCTCTTTCCCACACCCTTCCCCTTGTAAGCTTAGCTTCTT  350

seq1  GTAAAACTGAATGACATACTGCTTAAATAAGGGATTTTCTTTTCTTCTTC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAAACTGAATGACATACTGCTTAAATAAGGGATTTTCTTTTCTTCTTC  400

seq1  CTTCCTCCTTGCCCCCCCCCCTCTCTCCCCTTCTTCTTTCAACTACATGG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCTCCTTGCCCCCCCCCCTCTCTCCCCTTCTTCTTTCAACTACATGG  450

seq1  AATTC  454
      |||||
seq2  AATTC  455