BAC Information

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BAC

Clone NameB6Ng01-023M04
ChromosomeX (Build37)
Map Location 112,736,321 - 112,737,536
singlet/doubletsinglet
Overlap genenone
Upstream geneEG546361, EG237009, 4930524E20Rik, LOC237008, EG664969, EG546362, LOC100039255, LOC623913, LOC546363
Downstream geneLOC100039277, Cpxcr1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-023M04.bB6Ng01-023M04.g
ACCDH855591DH855592
length9331,206
definitionDH855591|Mus musculus domesticus DNA, BAC clone: B6Ng01-023M04, 5' end.DH855592|Mus musculus domesticus DNA, BAC clone: B6Ng01-023M04, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctgttcttgtggctgtattctttaagtttgttgaagaattacttt
cttgctttttccagggtgtcatttccatcattttgttggtgtttttcctt
tattatcccttgataggatggattcgtggaaagatattgtgtgaatttgg
ttttatcatggaatactttggtttctccatctatggtaattgagagtttt
gctgggtatagtagcctgggctgacatttgtgttctcttagggtctgcat
aacatctgtccaggatcttctggctttcatagtctctggtgagaagtctg
gtgtaaattctaataggctggtctttatatgttacttgcccttttttcct
tactgcttttaatatgctatgtttatttagtgcatttgttctgattatta
tgtttctgtaggaatttcttttctgatgcagtctatttggagttctgtag
gcttcttgtatgttcatggtcatctttcttcaggtttgggaatttttctt
ctataattttgtcgaagatatttgatggccctttaatttgagaatcttca
ttctcatctactcctattatcagtaggtttggtcttctcgttgtgtcctg
aatttcctggatgttttgagttaggatctttttgcattttccattttctt
tgattgttgtactcactttgggttttctttattgtgtctacttccctttt
tagggcttgtttggttttttcaaatccattacttgtttggttgtggtttt
cctggttttctttaagacttgtacctctatagcagtgttcttcattattt
ctttgtgtgagtttaaaatctttcttgatgtcttctccagccatcaagga
atatgatttaaatctgagttttgcattttctattatgttggggatctgag
aatggctgagggtggagtgctgggtttggatag
gaattcttgagacccgcagacctaattaggatgtctctataaaatctctc
ccctcagggctcagggaaccctaccgaagaggaggttgaagtgtaagatc
cagagggaatacaggacatcaagacaaagagagtctctaaatcaataggc
tctaagttcatatgatctcagagagacaaaggcagaattcacagggactg
tgcagttctttatcagatcatttaagtatatattatggcttttactttag
tgtttttattgacaatcctaagtgtgtgaatgaatgggtctttgcttctc
ctgggctttttttgaatgtttttgtttttccaatttcaattacttttgtt
ttattttattttatcattatcttttacatgcctgtttattttctgataag
acagaaagggagtagatctgaataggaggggaggtggtccacaattagga
gtaaagatagagaaaaccacaatcaggaaattatatgtgagacaaaagta
tctcgttttaatacaaagagaaataatatattttcaagtatttagtttta
atttttgtttgagtaaagaggaaataaataaacatatttcaaatgctttt
ttgatacatcgcccaaaattgatccactatggtttactatgtggtgcatt
ttagtaaaactgagacttattttaacagttaacaagcaagttatcctcag
agcattgatgtggaatgttgatgaatcttacaaaggcatgataattagat
tgtgactttctgaagagcaaggcaaaagaaaaggaagcagtgacatatca
tgttcaaaaaaattaaagcaagacaatatctaaaactcaagggactgtaa
acatacaaaatgatgttgttgaatcccattcatgcagagaaagaaaaatg
taatttacaggcagatgattgtcttttttctttcatatgactctaggaaa
agtcaaataagaaattgatgaacaaaataatcactataaagggatgcttg
ctcctcctcactctcttctccttacttcttcctcttcctcccaatcctct
tcaagtctctttccaggtgctcttctttctggctttctcggttcctatcc
cctatactgaataggctaatatgtcataactttcgtgtctggacccatgg
aaatgatgcctctagatgggccaatagagatgaccttcgccatgttgtga
tacata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_112736321_112737536
seq2: B6Ng01-023M04.g_95_1272

seq1  GGATGTCTCTATAAAATCTCTCCCCTCAGGGCTCAGGGAACCCTACCGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGTCTCTATAAAATCTCTCCCCTCAGGGCTCAGGGAACCCTACCGAA  50

seq1  GAGGAGGTTGAAGTGTAAGATCCAGAGGGAATACAGGACATCAAGACAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAGGTTGAAGTGTAAGATCCAGAGGGAATACAGGACATCAAGACAAA  100

seq1  GAGAGTCTCTAAATCAATAGGCTCTAAGTTCATATGATCTCAGAGAGACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGTCTCTAAATCAATAGGCTCTAAGTTCATATGATCTCAGAGAGACA  150

seq1  AAGGCAGAATTCACAGGGACTGTGCAGTTCTTTATCAGATCATTTAAGTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCAGAATTCACAGGGACTGTGCAGTTCTTTATCAGATCATTTAAGTA  200

seq1  TATATTATGGCTTTTACTTTAGTGTTTTTATTGACAATCCTAAGTGTGTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATTATGGCTTTTACTTTAGTGTTTTTATTGACAATCCTAAGTGTGTG  250

seq1  AATGAATGGGTCTTTGCTTCTCCTGGGCTTTTTTTGAATGTTTTTGTTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAATGGGTCTTTGCTTCTCCTGGGCTTTTTTTGAATGTTTTTGTTTT  300

seq1  TCCAATTTCAATTACTTTTGTTTTATTTTATTTTATCATTATCTTTTACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAATTTCAATTACTTTTGTTTTATTTTATTTTATCATTATCTTTTACA  350

seq1  TGCCTGTTTATTTTCTGATAAGACAGAAAGGGAGTAGATCTGAATAGGAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTGTTTATTTTCTGATAAGACAGAAAGGGAGTAGATCTGAATAGGAG  400

seq1  GGGAGGTGGTCCACAATTAGGAGTAAAGATAGAGAAAACCACAATCAGGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGGTGGTCCACAATTAGGAGTAAAGATAGAGAAAACCACAATCAGGA  450

seq1  AATTATATGTGAGACAAAAGTATCTCGTTTTAATACAAAGAGAAATAATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTATATGTGAGACAAAAGTATCTCGTTTTAATACAAAGAGAAATAATA  500

seq1  TATTTTCAAGTATTTAGTTTTAATTTTTGTTTGAGTAAAGAGGAAATAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTCAAGTATTTAGTTTTAATTTTTGTTTGAGTAAAGAGGAAATAAA  550

seq1  TAAACATATTTCAAATGCTTTTTTGATACATCGCCCAAAATTGATCCACT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACATATTTCAAATGCTTTTTTGATACATCGCCCAAAATTGATCCACT  600

seq1  ATGGTTTACTATGTGGTGCATTTTAGTAAAACTGAGACTTATTTTAACAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTTTACTATGTGGTGCATTTTAGTAAAACTGAGACTTATTTTAACAG  650

seq1  TTAACAAGCAAGTTATCCTCAGAGCATTGATGTGGAATGTTGATGAATCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACAAGCAAGTTATCCTCAGAGCATTGATGTGGAATGTTGATGAATCT  700

seq1  TACAAAGGCATGATAATTAGATTGTGACTTTCTGAAGAGCAAGGCAAAAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAAGGCATGATAATTAGATTGTGACTTTCTGAAGAGCAAGGCAAAAG  750

seq1  AAAAGGAAGCAGTGACATATCATGTTCAAAAAAATTAAAGCAAGACAATA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGGAAGCAGTGACATATCATGTTCAAAAAAATTAAAGCAAGACAATA  800

seq1  TCTAAAACTCAAGGGACTGTAAACATACAAAATGATGTTGTTGAATCCCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAAACTCAAGGGACTGTAAACATACAAAATGATGTTGTTGAATCCCA  850

seq1  TTCATGCAAGAGAAAGAAAAAATGTAATTTAACAGGCAGATGATTGTCTT  900
      ||||||| |||||||| ||||||||||||| |||||||||||||||||||
seq2  TTCATGC-AGAGAAAG-AAAAATGTAATTT-ACAGGCAGATGATTGTCTT  897

seq1  TTTCCTTTCATATGACTCTAAGGAAAAGTCAAAATTAAGAAAATTGATGA  950
      ||| ||||||||||||||| |||||||||||||  |||| ||||||||||
seq2  TTTTCTTTCATATGACTCT-AGGAAAAGTCAAA--TAAG-AAATTGATGA  943

seq1  ACAAAAATAAATCACTATAAAAGGGGATGCTTGCTCCCTCCTCACTCTCT  1000
      ||||||   ||||||||||||  |||||||||||| ||||||||||||||
seq2  ACAAAA--TAATCACTATAAA--GGGATGCTTGCT-CCTCCTCACTCTCT  988

seq1  TCTCCCTTACCTTCTTCCCTCTCTCTCCCCATTCCTCTTCCAAGTCTCTT  1050
      ||| ||||| |||||| ||||| ||  |||| ||||||| ||||||||||
seq2  TCT-CCTTA-CTTCTT-CCTCT-TCCTCCCAATCCTCTT-CAAGTCTCTT  1033

seq1  TCCAGGTGCTCTTCTCTCTGCCTTTCTCTGTATCTACTACCCTCCTATAC  1100
      ||||||||||||||| |||| ||||||| ||   | ||| || |||||| 
seq2  TCCAGGTGCTCTTCTTTCTGGCTTTCTCGGT---TCCTATCC-CCTATA-  1078

seq1  CCTAAATAAGCTCTATTATGTCATATACCTTCCTGTGTCTGGTACCTCAG  1150
       || |||| |  ||| ||||||||| || |||  |||||||| ||| || 
seq2  -CTGAATAGG--CTAATATGTCATA-ACTTTC--GTGTCTGG-ACC-CA-  1119

seq1  TGGGAAATGATGCCTCAGTATGGGCCACATAGAGATAGCAGCTTCGCCCA  1200
        ||||||||||||||   |||||||| ||||||||   | |||||||  
seq2  -TGGAAATGATGCCTCTAGATGGGCCA-ATAGAGAT--GACCTTCGCC--  1163

seq1  TGTGTGGTGATACATA  1216
        ||| ||||||||||
seq2  -ATGTTGTGATACATA  1178