BAC Information

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BAC

Clone NameB6Ng01-024J24
ChromosomeX (Build37)
Map Location 52,022,865 - 52,023,551
singlet/doubletsinglet
Overlap geneLOC666122
Upstream gene4930502E18Rik, 1700013H16Rik, EG547172, Zfp36l3, Xlr, LOC100040719, LOC100040730, LOC100040260, LOC100040271, LOC100040765, LOC194788, LOC100040789, LOC666072, LOC100040317, LOC625476, LOC625508, LOC666096, LOC100040867, LOC100040894
Downstream geneLOC666135, LOC100038960, EG666151, EG666161, EG666199, 4930527E24Rik, LOC626274, LOC625210, LOC100039055, LOC100039066, LOC676623
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-024J24.bB6Ng01-024J24.g
ACCDH856203DH856204
length6881,148
definitionDH856203|Mus musculus domesticus DNA, BAC clone: B6Ng01-024J24, 5' end.DH856204|Mus musculus domesticus DNA, BAC clone: B6Ng01-024J24, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcatgaaaaacaaactgaagaccagtcttcattgtcctctacctgg
tattgaaagtccagattgccgacatttgtatatataggccgcaaactgcc
tccaaaaccagaggctcctctcagcctgagaagttctgggtcttcagaca
taattcaggccaggctgtgtttatttatgcattgttttggtttagggaag
tgaactctaactttgtatctcaggagtgtcagaaacctcatgtgcagctt
ggacttgccttgaaactgaagtcctcagccttacaaatgtactggggcct
gagggaacatgcctgctttatttttttttaattttattttcattgttgaa
gattgaaaccagagtttcttgctgtagcagtaaaatatatgtccagccag
gcagaactttataatttacatttgctttagatttgtattgcaatgaaaaa
gattgaggaacttgcttgtgataataagaactatgattttatttggagat
tgaaatgcagacaaagttgcttaattttatcaaaaacctgcaggaatcgg
accaaaatgcagatcctcctatgattagatataaaccaaattgatgtcac
agttaaagccaccatagcgtttttgtgtgtgtgtgtgagaaagagagaga
gagagagagagagagagagagagagagagagagagagt
gaattcctaggacttgctggctgcttgtctagctgcatgttcagtgacag
aacatgtcttaagggaataaggtagaaagtaaaagagcaacagccaacaa
tctcctctgccctccacatatgtatacatgtaccacagacacaaacatgc
aaaaaaataaaataaaaatgaagtttcattaatgtcacacctcttcaaaa
agcaccattttcacctctataccatagaaaaaaataagtccatggggcta
aatcaaaaatatttgcaagagtctgtgtcatgggtagactttgtgtgctg
actctgcacctagtctcacaataccaacaggaaactcaactcccaggtgc
tctagtactcccaagatcacaagaatggctttaacatcagaagtaactga
gtccccaaggatccagggacacaggaactcctaccttgccagatgcatcc
ccaacatctggagtaactcagtcccaaaggatccagggacacaggcattc
ttgccttggcagtggcatggttccctattggtctgaaactatagctggat
cagacctggggtactgcctttgtacccactcttaaaacacccagaaggag
ctcaactctcgggtatctgaaatgcccaagatcacaggatcacaaaagaa
gcatgactccacggagatcagacaaaccaagggacactccagttctgaca
gaagatcacagctgagggcacaacatcttgcccaacaccctgtgtatctg
acaccccccacataaaccagggaaagaaaaacaccctcccagacagaggc
atgggttccttgcagcttgcatctgtgtccagagaaaaactagtgacttg
gcaccccaccaaatcttgcaacaccaagaaaatcttcactccccggagct
ctgacacaggatctcagagattggttataccagggtttgaggatccagag
cagcttgacttccacgagcttagacataccagcatatcaggatcccagga
tcccttgatccagagaacagctggactctgatgagttctgtcacaaccag
gtttacaggagggagagctccaggtcgagactgcaggcagtagtacaaag
aaatgaaattgtgtggaagggtagccacagaaaatatgccaagttgaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_52022865_52023551
seq2: B6Ng01-024J24.b_47_733

seq1  GAATTCATGAAAAACAAACTGAAGACCAGTCTTCATTGTCCTCTACCTGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATGAAAAACAAACTGAAGACCAGTCTTCATTGTCCTCTACCTGG  50

seq1  TATTGAAAGTCCAGATTGCCGACATTTGTATATATAGGCCGCAAACTGCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGAAAGTCCAGATTGCCGACATTTGTATATATAGGCCGCAAACTGCC  100

seq1  TCCAAAACCAGAGGCTCCTCTCAGCCTGAGAAGTTCTGGGTCTTCAGACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAAAACCAGAGGCTCCTCTCAGCCTGAGAAGTTCTGGGTCTTCAGACA  150

seq1  TAATTCAGGCCAGGCTGTGTTTATTTATGCATTGTTTTGGTTTAGGGAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTCAGGCCAGGCTGTGTTTATTTATGCATTGTTTTGGTTTAGGGAAG  200

seq1  TGAACTCTAACTTTGTATCTCAGGAGTGTCAGAAACCTCATGTGCAGCTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACTCTAACTTTGTATCTCAGGAGTGTCAGAAACCTCATGTGCAGCTT  250

seq1  GGACTTGCCTTGAAACTGAAGTCCTCAGCCTTACAAATGTACTGGGGCCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACTTGCCTTGAAACTGAAGTCCTCAGCCTTACAAATGTACTGGGGCCT  300

seq1  GAGGGAACATGCCTGCTTTATTTTTTTTTAATTTTATTTTCATTGTTGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGAACATGCCTGCTTTATTTTTTTTTAATTTTATTTTCATTGTTGAA  350

seq1  GATTGAAACCAGAGTTTCTTGCTGTAGCAGTAAAATATATGTCCAGCCAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTGAAACCAGAGTTTCTTGCTGTAGCAGTAAAATATATGTCCAGCCAG  400

seq1  GCAGAACTTTATAATTTACATTTGCTTTAGATTTGTATTGCAATGAAAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAACTTTATAATTTACATTTGCTTTAGATTTGTATTGCAATGAAAAA  450

seq1  GATTGAGGAACTTGCTTGTGATAATAAGAACTATGATTTTATTTGGAGAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTGAGGAACTTGCTTGTGATAATAAGAACTATGATTTTATTTGGAGAT  500

seq1  TGAAATGCAGACAAAGTTGCTTAATTTTATCAAAAACCTGCAGGAATCGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAATGCAGACAAAGTTGCTTAATTTTATCAAAAACCTGCAGGAATCGG  550

seq1  ACCAAAATGCAGATCCTCCTATGATTAGATATAAACCAAATTGATGTCAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAAAATGCAGATCCTCCTATGATTAGATATAAACCAAATTGATGTCAC  600

seq1  AGTTAAAGCCACCATAGCGTTTTTGTGTGTGTGTGTGAGAAAGAGAGAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTAAAGCCACCATAGCGTTTTTGTGTGTGTGTGTGAGAAAGAGAGAGA  650

seq1  GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG  687
      |||||||||||||||||||||||||||||||||||||
seq2  GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG  687