BAC Information

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BAC

Clone NameB6Ng01-025D14
ChromosomeX (Build37)
Map Location 64,488,542 - 64,615,096
singlet/doubletdoublet
Overlap genenone
Upstream geneSlitrk2, LOC666824, LOC627734, EG666828
Downstream geneGm1140, LOC666842, LOC619873, 4933436I01Rik, LOC100040194, EG236844, LOC385372
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-025D14.bB6Ng01-025D14.g
ACCDH856637DH856638
length9301,110
definitionDH856637|Mus musculus domesticus DNA, BAC clone: B6Ng01-025D14, 5' end.DH856638|Mus musculus domesticus DNA, BAC clone: B6Ng01-025D14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(64,614,157 - 64,615,096)(64,488,542 - 64,489,690)
sequence
gaattctttgtttagcactgagccccatttttaatggggttatttgattt
tctgaagtccaccttcttgagttctttttatatattggatattagtcccc
tatcagaatcttacattgaggtactcaatttcatttactctactggattt
gaggtttggctttgatctgattatttttgttccctgcttctttttttata
taagaaaatgtgcaacattttttccactttaaaggaccccagagataagc
aatttttgaatattttttggaccatgagcttctagagaaatggaatttaa
aggactatgggagctttaattttatattatacattttggtattaacatga
gatcttggtaatgaacaggaaaggaaagtttatatagtttatattgacac
aaacaatgacatgtttgtgtgtcaagtagagaaggtatgaattttattga
ttagtttctattgtggagctggcacaaatttaatacgcctgggaaatctg
actctcaaggaattttctagatcagattagcattttggcatatctaggaa
cattttttaaatttcttttttaaaatctcttaatgatgtagcacatccca
tggtggcacacatacgcacgcacgcacacacacacacacacacacacaca
cacacacacacacacactcacatacacaaccatcaggttctatttagaat
gtttagattggccaagtattccagggcatgggcctgccttggaatgtcgt
tgaaattcccagtgacactcattttcctggaggggaaaccaggaaagggg
ataacatataaaatataaataaataaataaaatattcatttaaaaaatct
ttaaaattccagtgacactccattggagaaaagtatttttgccttttcat
caggataattgaacttttagtaatatcttg
gaattcactgaagtagaaaccattacagaacattttataaaatctttatt
cacaaacaatttgggatttaacaattccaatttcatgcagctgtaggttt
caccatcttctcagtaggttttaagcatttattgatttacaaattgcttt
tcagccagtctccaacaaccttcattgtctgtacgcagccttctggtcct
ggcatttgccataatcaaactacatttaatggatggaagaggattgacct
taagtatataattttataatagtatcctaggagttttgggttgttaaagc
atctctacactgatattattctgttgaattactgccctcttttatttaat
tcatttttcaggttaagggattgaacctaggggcccctccacacacacac
caggcaaattttcttgtatagagatatatatgctcatcaatttgaattat
tcttttaatggatcctatctgagggcaaaaaacatatagatgttatgtaa
tgccttataattgataaaacatttcaaatacttaatcatatttgatggag
gaaacattttattttctacttagtacaaataagcaaattaattacattaa
gttcagaaaaataaaagcccacagtcacatataaaataaactgtgttatc
agtgaatcttcatattttgtctctttttctttctagtaaactacagtgtc
ttcaaaatagtttggatactaatgtttgggctctagctaactggatctta
gcctgagttatttgctgttactcatctttacttctatttcacttacattt
tagatgaaagtcaacaccaagaagttgcttctttaccattggtaatgtac
aaaggagcctgaaaacactatttttaagagaggaataaacagacatgaac
agaccttagttttaagacactaaagtctttagatcaccatatccataatt
cacttagagatatgcttagtgtgggtactctatattgcattatttgctat
tttttatcccagactttatttcatactcccctatattttagagaacagta
tgttaatacgaatattagtctctagtactgataggtctgattgatctcgt
gaaagaactc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_64614157_64615096
seq2: B6Ng01-025D14.b_30_959 (reverse)

seq1  CAAGATATTACTAAAATGTTTCAATTGATACCTGATGAAAAAGGCAAAAA  50
      ||||||||||||||||   ||||||| || ||||||| ||||||||||||
seq2  CAAGATATTACTAAAA--GTTCAATT-AT-CCTGATG-AAAAGGCAAAAA  45

seq1  TACATTTTCTCCAATGGAGTGTCACTTGGAATTTTTAAAGATTTTTTTAA  100
      ||| ||||||||||||||||||||| ||||| ||||||||| ||||||||
seq2  TAC-TTTTCTCCAATGGAGTGTCAC-TGGAA-TTTTAAAGA-TTTTTTAA  91

seq1  TTGAATATTTTATTTATTTATTTATATTTTATATGTTATCCCCTTTCCTG  150
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAATATTTTATTTATTTATTTATATTTTATATGTTATCCCCTTTCCTG  141

seq1  GTTTCCCCTCCAGGAAAACTGAGTGTCACTGGGAATTTCAACGACATTCC  200
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  GTTTCCCCTCCAGGAAAA-TGAGTGTCACTGGGAATTTCAACGACATTCC  190

seq1  AAGGCAGGCCCATGCCCTGGAATACTTGGCCAATCTAAACATTCTAAATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCAGGCCCATGCCCTGGAATACTTGGCCAATCTAAACATTCTAAATA  240

seq1  GAACCTGATGGTTGTGTATGTGAGTGTGTGTGTGTGTGTGTGTGTGTGTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACCTGATGGTTGTGTATGTGAGTGTGTGTGTGTGTGTGTGTGTGTGTG  290

seq1  TGTGTGTGTGTGTGTGCGTGCGTGCGTATGTGTGCCACCATGGGATGTGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGTGTGTGTGCGTGCGTGCGTATGTGTGCCACCATGGGATGTGC  340

seq1  TACATCATTAAGAGATTTTAAAAAAGAAATTTAAAAAATGTTCCTAGATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATCATTAAGAGATTTTAAAAAAGAAATTTAAAAAATGTTCCTAGATA  390

seq1  TGCCAAAATGCTAATCTGATCTAGAAAATTCCTTGAGAGTCAGATTTCCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCAAAATGCTAATCTGATCTAGAAAATTCCTTGAGAGTCAGATTTCCC  440

seq1  AGGCGTATTAAATTTGTGCCAGCTCCACAATAGAAACTAATCAATAAAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCGTATTAAATTTGTGCCAGCTCCACAATAGAAACTAATCAATAAAAT  490

seq1  TCATACCTTCTCTACTTGACACACAAACATGTCATTGTTTGTGTCAATAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATACCTTCTCTACTTGACACACAAACATGTCATTGTTTGTGTCAATAT  540

seq1  AAACTATATAAACTTTCCTTTCCTGTTCATTACCAAGATCTCATGTTAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTATATAAACTTTCCTTTCCTGTTCATTACCAAGATCTCATGTTAAT  590

seq1  ACCAAAATGTATAATATAAAATTAAAGCTCCCATAGTCCTTTAAATTCCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAAAATGTATAATATAAAATTAAAGCTCCCATAGTCCTTTAAATTCCA  640

seq1  TTTCTCTAGAAGCTCATGGTCCAAAAAATATTCAAAAATTGCTTATCTCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCTAGAAGCTCATGGTCCAAAAAATATTCAAAAATTGCTTATCTCT  690

seq1  GGGGTCCTTTAAAGTGGAAAAAATGTTGCACATTTTCTTATATAAAAAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGTCCTTTAAAGTGGAAAAAATGTTGCACATTTTCTTATATAAAAAAA  740

seq1  GAAGCAGGGAACAAAAATAATCAGATCAAAGCCAAACCTCAAATCCAGTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCAGGGAACAAAAATAATCAGATCAAAGCCAAACCTCAAATCCAGTA  790

seq1  GAGTAAATGAAATTGAGTACCTCAATGTAAGATTCTGATAGGGGACTAAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTAAATGAAATTGAGTACCTCAATGTAAGATTCTGATAGGGGACTAAT  840

seq1  ATCCAATATATAAAAAGAACTCAAGAAGGTGGACTTCAGAAAATCAAATA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCAATATATAAAAAGAACTCAAGAAGGTGGACTTCAGAAAATCAAATA  890

seq1  ACCCCATTAAAAATGGGGCTCAGTGCTAAACAAAGAATTC  940
      ||||||||||||||||||||||||||||||||||||||||
seq2  ACCCCATTAAAAATGGGGCTCAGTGCTAAACAAAGAATTC  930

seq1: chrX_64488542_64489690
seq2: B6Ng01-025D14.g_71_1180

seq1  GAATTCACTGAAGTAGAAACCATTACAGAACATTTTATAAAATCTTTATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTGAAGTAGAAACCATTACAGAACATTTTATAAAATCTTTATT  50

seq1  CACAAACAATTTGGGATTTAACAATTCCAATTTCATGCAGCTGTAGGTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAACAATTTGGGATTTAACAATTCCAATTTCATGCAGCTGTAGGTTT  100

seq1  CACCATCTTCTCAGTAGGTTTTAAGCATTTATTGATTTACAAATTGCTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCATCTTCTCAGTAGGTTTTAAGCATTTATTGATTTACAAATTGCTTT  150

seq1  TCAGCCAGTCTCCAACAACCTTCATTGTCTGTACGCAGCCTTCTGGTCCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCCAGTCTCCAACAACCTTCATTGTCTGTACGCAGCCTTCTGGTCCT  200

seq1  GGCATTTGCCATAATCAAACTACATTTAATGGATGGAAGAGGATTGACCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATTTGCCATAATCAAACTACATTTAATGGATGGAAGAGGATTGACCT  250

seq1  TAAGTATATAATTTTATAATAGTATCCTAGGAGTTTTGGGTTGTTAAAGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTATATAATTTTATAATAGTATCCTAGGAGTTTTGGGTTGTTAAAGC  300

seq1  ATCTCTACACTGATATTATTCTGTTGAATTACTGCCCTCTTTTATTTAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCTACACTGATATTATTCTGTTGAATTACTGCCCTCTTTTATTTAAT  350

seq1  TCATTTTTCAGGTTAAGGGATTGAACCTAGGGGCCCCTCCACACACACAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTTTCAGGTTAAGGGATTGAACCTAGGGGCCCCTCCACACACACAC  400

seq1  CAGGCAAATTTTCTTGTATAGAGATATATATGCTCATCAATTTGAATTAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCAAATTTTCTTGTATAGAGATATATATGCTCATCAATTTGAATTAT  450

seq1  TCTTTTAATGGATCCTATCTGAGGGCAAAAAACATATAGATGTTATGTAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTAATGGATCCTATCTGAGGGCAAAAAACATATAGATGTTATGTAA  500

seq1  TGCCTTATAATTGATAAAACATTTCAAATACTTAATCATATTTGATGGAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTTATAATTGATAAAACATTTCAAATACTTAATCATATTTGATGGAG  550

seq1  GAAACATTTTATTTTCTACTTAGTACAAATAAGCAAATTAATTACATTAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACATTTTATTTTCTACTTAGTACAAATAAGCAAATTAATTACATTAA  600

seq1  GTTCAGAAAAATAAAAGCCCACAGTCACATATAAAATAAACTGTGTTATC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCAGAAAAATAAAAGCCCACAGTCACATATAAAATAAACTGTGTTATC  650

seq1  AGTGAATCTTCATATTTTGTCTCTTTTTCTTTCTAGTAAACTACAGTGTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGAATCTTCATATTTTGTCTCTTTTTCTTTCTAGTAAACTACAGTGTC  700

seq1  TTCAAAATAGTTTGGATACTAATGTTTGGGCTCTAGCTAACTGGATCTTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAAATAGTTTGGATACTAATGTTTGGGCTCTAGCTAACTGGATCTTA  750

seq1  GCCTGAGTTATTTGCTGTTACTCATCTTTACTTCTATTTCACTTACATTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGAGTTATTTGCTGTTACTCATCTTTACTTCTATTTCACTTACATTT  800

seq1  TAGATGAAAGTCAACACCAAGAAGTTGCTTCTTTACCATTGGTAATGTAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATGAAAGTCAACACCAAGAAGTTGCTTCTTTACCATTGGTAATGTAC  850

seq1  AAAGGAGCCTGAAAACACTATTTTTAAGAGAAGGAATAAACAGACATGAA  900
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  AAAGGAGCCTGAAAACACTATTTTTAAGAG-AGGAATAAACAGACATGAA  899

seq1  CAGACCTTAGTTTTTAAGACACTAAAGTCTTTAAGAATCAACCATAATCC  950
      |||||||||| ||||||||||||||||||||||   ||| ||||| ||||
seq2  CAGACCTTAG-TTTTAAGACACTAAAGTCTTTA--GATC-ACCAT-ATCC  944

seq1  AATAATTCACTTAAGAAGAATATGCTTTAGTGTTGGGTACTTCTTATATT  1000
       ||||||||||| |||   |||||| |||||| ||||||||   ||||||
seq2  -ATAATTCACTT-AGA--GATATGC-TTAGTG-TGGGTACT--CTATATT  986

seq1  GCATTAATTTTGCTATTTTTTATCCCCAGAACTTTTAATTTCCATTAACT  1050
      ||||||  ||||||||||||||| ||||| |||||  |||| |||  |||
seq2  GCATTA--TTTGCTATTTTTTAT-CCCAG-ACTTT--ATTT-CAT--ACT  1027

seq1  CCCCTATATATAAGAGAAACCAGTAATGTTAAATTACGAATATATTAAGT  1100
      ||||||||| | ||||||  |||| |||||||  ||||||||   | |||
seq2  CCCCTATATTTTAGAGAA--CAGT-ATGTTAA--TACGAATA---TTAGT  1069

seq1  CTTCTAGTTACCTGATTAAAGTCTGATTGATTCTCGGTAGAAAGAACTC  1149
      | ||||||   |||||  | |||||||||| |||||   ||||||||||
seq2  C-TCTAGT--ACTGAT--AGGTCTGATTGA-TCTCG--TGAAAGAACTC  1110