BAC Information

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BAC

Clone NameB6Ng01-029P08
ChromosomeX (Build37)
Map Location 96,771,574 - 96,917,761
singlet/doubletdoublet
Overlap geneLOC100042947
Upstream geneOphn1, Yipf6, LOC100042932, Stard8, LOC436219, Efnb1, Pja1
Downstream genePcna-ps1, EG620592, Eda, Dgat2l4, Otud6a, Igbp1, LOC668257, Dgat2l3, LOC620734, P2ry4, Arr3, Pdzd11, Kif4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-029P08.bB6Ng01-029P08.g
ACCDH860006DH860007
length823454
definitionDH860006|Mus musculus domesticus DNA, BAC clone: B6Ng01-029P08, 5' end.DH860007|Mus musculus domesticus DNA, BAC clone: B6Ng01-029P08, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(96,917,217 - 96,917,761)(96,771,574 - 96,772,033)
sequence
gaattccaggaaactaatgcaaggagatctccgagttcaaagtcagccta
gaacaaagcaagtcccagatccaggctttctgtcacacacctttaatctg
ggccacaccttctgctggagacctacataaggtcattgaaagaaggaaga
ttagctcttcttcacctgcttgcatttacttgccagcacatctgttggca
tctatctactagccttgtgggactaagcaactactaggtccttggacttc
ccattcacagctgaccattgttggggagttggactacagactgtaagtca
taataacaaattcccttactgtatagagactatccataaattctgtgact
ctagagaaccctgactagcgcatgtgcctatggaggccagaggttgactt
agagtatcttcctttattgcgctccatcaagtgctttgagacagggtctc
tcactggatccaaaatatatgaattggcatctgtttctacatccaccagc
attagagttatagatactttgtcacactgggaaatttttttaggggagct
ggggatttgaactcagatcctcatgtttgcactacaagtgtatctaagcc
atgtccccagattttcccatgctttcgtctaaaaaatttataacttaaaa
ctttacatttagttctgtgttccattttggattactttttctagaagatg
tgatgtttagagtacgggtgttgctgctgctggtggttttgttgttgttg
gttggttgtatgtcaaggtcacatttttgtttggttgaaggttatacaca
tgggtggggtgttgtggatgacc
acagagatcagcagctaagacattcactggcacctagtgcgtgctttgtt
tgttcgcttgcttttttgagacactgtcttgtgtcttgttcctctgcctt
attttttttttttttttgcactgttctttaaattatcattgcatatgtgc
agtgggacatgtgtcatggtgcacatgtggaggtcagatgacatctttgt
ggtgtcagatcttccatttttccccctcttttggctttttgagacagggt
ttctttgtgtagccctggctgtcctggaggaacaagctgacctccacttc
agagatccacctgcctctgcctcctgacctggctttccttccacctttct
gtgtattctggagattgaactcgggtcaccaggcttatatgtcaagtacc
tttacccactgagccaccttgctggccctactttgcttttttgttgttgt
tggt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_96917217_96917761
seq2: B6Ng01-029P08.b_324_868 (reverse)

seq1  GCTCATCCACAACACCCCA-CCATGTGTATAAACCTTCAACCAAACAAAA  49
      | ||||||||||||||||| |||||||||| |||||||||||||||||||
seq2  GGTCATCCACAACACCCCACCCATGTGTAT-AACCTTCAACCAAACAAAA  49

seq1  ATGTGACCTTGACATACAACCAACCAACAACAACAAAACCACCAGCAGCA  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGACCTTGACATACAACCAACCAACAACAACAAAACCACCAGCAGCA  99

seq1  GCAACACCCGTACTCTAAACATCACATCTTCTAGAAAAAGTAATCCAAAA  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAACACCCGTACTCTAAACATCACATCTTCTAGAAAAAGTAATCCAAAA  149

seq1  TGGAACACAGAACTAAATGTAAAGTTTTAAGTTATAAATTTTTTAGACGA  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAACACAGAACTAAATGTAAAGTTTTAAGTTATAAATTTTTTAGACGA  199

seq1  AAGCATGGGAAAATCTGGGGACATGGCTTAGATACACTTGTAGTGCAAAC  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCATGGGAAAATCTGGGGACATGGCTTAGATACACTTGTAGTGCAAAC  249

seq1  ATGAGGATCTGAGTTCAAATCCCCAGCTCCCCTAAAAAAATTTCCCAGTG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGGATCTGAGTTCAAATCCCCAGCTCCCCTAAAAAAATTTCCCAGTG  299

seq1  TGACAAAGTATCTATAACTCTAATGCTGGTGGATGTAGAAACAGATGCCA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACAAAGTATCTATAACTCTAATGCTGGTGGATGTAGAAACAGATGCCA  349

seq1  ATTCATATATTTTGGATCCAGTGAGAGACCCTGTCTCAAAGCACTTGATG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCATATATTTTGGATCCAGTGAGAGACCCTGTCTCAAAGCACTTGATG  399

seq1  GAGCGCAATAAAGGAAGATACTCTAAGTCAACCTCTGGCCTCCATAGGCA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCGCAATAAAGGAAGATACTCTAAGTCAACCTCTGGCCTCCATAGGCA  449

seq1  CATGCGCTAGTCAGGGTTCTCTAGAGTCACAGAATTTATGGATAGTCTCT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCGCTAGTCAGGGTTCTCTAGAGTCACAGAATTTATGGATAGTCTCT  499

seq1  ATACAGTAAGGGAATTTGTTATTATGACTTACAGTCTGTAGTCCAA  545
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAGTAAGGGAATTTGTTATTATGACTTACAGTCTGTAGTCCAA  545

seq1: chrX_96771574_96772033
seq2: B6Ng01-029P08.g_69_528

seq1  GAATTCACAGAGATCAGCAGCTAAGACATTCACTGGCACCTAGTGCGTGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACAGAGATCAGCAGCTAAGACATTCACTGGCACCTAGTGCGTGC  50

seq1  TTTGTTTGTTCGCTTGCTTTTTTGAGACACTGTCTTGTGTCTTGTTCCTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTTGTTCGCTTGCTTTTTTGAGACACTGTCTTGTGTCTTGTTCCTC  100

seq1  TGCCTTATTTTTTTTTTTTTTTTGCACTGTTCTTTAAATTATCATTGCAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTTATTTTTTTTTTTTTTTTGCACTGTTCTTTAAATTATCATTGCAT  150

seq1  ATGTGCAGTGGGACATGTGTCATGGTGCACATGTGGAGGTCAGATGACAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGCAGTGGGACATGTGTCATGGTGCACATGTGGAGGTCAGATGACAT  200

seq1  CTTTGTGGTGTCAGATCTTCCATTTTTCCCCCTCTTTTGGCTTTTTGAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGTGGTGTCAGATCTTCCATTTTTCCCCCTCTTTTGGCTTTTTGAGA  250

seq1  CAGGGTTTCTTTGTGTAGCCCTGGCTGTCCTGGAGGAACAAGCTGACCTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGTTTCTTTGTGTAGCCCTGGCTGTCCTGGAGGAACAAGCTGACCTC  300

seq1  CACTTCAGAGATCCACCTGCCTCTGCCTCCTGACCTGGCTTTCCTTCCAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTCAGAGATCCACCTGCCTCTGCCTCCTGACCTGGCTTTCCTTCCAC  350

seq1  CTTTCTGTGTATTCTGGAGATTGAACTCGGGTCACCAGGCTTATATGTCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTGTGTATTCTGGAGATTGAACTCGGGTCACCAGGCTTATATGTCA  400

seq1  AGTACCTTTACCCACTGAGCCACCTTGCTGGCCCTACTTTGCTTTTTTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTACCTTTACCCACTGAGCCACCTTGCTGGCCCTACTTTGCTTTTTTGT  450

seq1  TGTTGTTGGT  460
      ||||||||||
seq2  TGTTGTTGGT  460