BAC Information

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BAC

Clone NameB6Ng01-031B11
ChromosomeX (Build37)
Map Location 22,671,566 - 22,827,167
singlet/doubletdoublet
Overlap geneKlhl13
Upstream geneLOC100043182, LOC100043956, EG436197, Ppia-psx_207.1, 1700023I07Rik
Downstream geneEG635719, Wdr44, EG236749, EG214450, EG245376, LOC546271, LOC100043957
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-031B11.bB6Ng01-031B11.g
ACCDH860803DH860804
length1,174678
definitionDH860803|Mus musculus domesticus DNA, BAC clone: B6Ng01-031B11, 5' end.DH860804|Mus musculus domesticus DNA, BAC clone: B6Ng01-031B11, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(22,826,005 - 22,827,167)(22,671,566 - 22,672,243)
sequence
gaattcaaaagtactgttccccaaacttcctgggctgcttctcagctgag
tgacagtcttatcactacagcagtagtgataagcattcagtgcttatgga
tgggcactcactgaattttaaaggcatatgccatagacttactgcacatt
ttactccttaaacaaatagtaagtgtcagttcctgtcttaagaattagaa
tactttctccaagtggacattgctttggcaaaatgcattgctattctttt
atatctgcatttctgaataagaaaggcaaggaatgagttgcagatgtttg
gtttaatagtgtttatattggcaaaggacagggctgtttatgaaaagttt
tgtaactgtgagcaaaaacatgcaattcatttgtggagatacacaaatat
gtccttctgttctaaagtatacatataacatgtgaatatttttctctccc
tagaggagcaatgattggatcagataacctctctgaagtttcaattctat
taaaccacatatttactttcaaaagtaactttaaaattataatgggaagt
ttatattgtggtttatattatacctatgggtagaatcaatattttcagaa
ttgtattcttagtaaattataccttttttggttcttaagttgtttcttaa
atctctgaaacatgactttatttgaggctttgaaatcaagtaatcattta
tatctgttcgtactgttatttatatctgttagcttactataatcttagag
cgtgatttatatcactttctatcacccgttttgttttataatgaaacgtt
tctttgaaagtacagattgagcctgtcacagtctttctttttgcttcatt
atctacttccatatcccttttagcagttgtttatgactctgttcattatt
tttaataaagtaagttatttcattcatcttgtaaaacatgtgtgatacac
atacattgtggaaattgactattgaaatcaaagcatttcattctcctaag
agtagagacaggagtagaaggcaactgccctggttgcaggcacctgaaag
agtaacgaccattactctttctccctggggcctgtcttctatgcactgta
ggccagcctgttcattctttgctaatccttaagccttgggacaataaagg
ctctctatgatccttcagtctcct
gaattctgtcacagtcttgacaaaagtgttccatgaatttaggaagagaa
gaaaattagagaaaccttcaggggaaaaaatgaagacaaacactttatgt
ttctagtggctcctagtcaccacaaatggattttattttcagttttagtt
ttttcttttataagaaaaggtgagaaaatctgattctagttgtaccaatt
ttccccagagatatctggagtctctttcacacaaaaagtttagtgtccat
ttacttttgttcttacctcttccttacaactttcaggtaacaaattattc
atgtaaaagctgtgtcaggaactcagctctctctgtactcaaaataatac
tgcccttccaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaacctcccc
agacagcaaacaggccatctggctgtgtcacagataaacctacacagtta
tagcatttgtggtagactaactattggggacaactttattccaggtaaca
ctaactcttcaatacagttaaattactttttttggtctcccagatagctt
tattttttttcccatgggaagataaaaatagacactgagtttgacccctt
gctaccatgatggctgagcacttactgcagtgtccttgcccaaactatgt
ggggtatatgtgtgtgtgtgtgtgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_22826005_22827167
seq2: B6Ng01-031B11.b_48_1221 (reverse)

seq1  ------------------AG-GAGACTTCATTGTCTCCAAAGGCTTAAAG  31
                        || ||| ||| ||||  ||| ||||||| |||
seq2  AGGAGACTGAAGGATCATAGAGAGCCTTTATTG--TCCCAAGGCTT-AAG  47

seq1  GATTAGCACAGAATGAACAGGCTGGCCCCTACAGTGCATAGGAAGGACAG  81
      |||||||| ||||||||||||||||  ||||||||||||||  | |||||
seq2  GATTAGCAAAGAATGAACAGGCTGG--CCTACAGTGCATAG--AAGACAG  93

seq1  GCCCCAGGGAG-AAGAGTATTGTTGGTTAACTCCTTCAGGTGCCCTGCAA  130
      ||||||||||| ||||||| || | ||| |||| |||||||| |||||||
seq2  GCCCCAGGGAGAAAGAGTAATGGTCGTT-ACTCTTTCAGGTG-CCTGCAA  141

seq1  CCAGGGCAGTTGCC-TCTACTCCCTGTCTCTACTCTTAGGAGAATGAAAT  179
      |||||||||||||| |||||| ||||||||||||||||||||||||||||
seq2  CCAGGGCAGTTGCCTTCTACT-CCTGTCTCTACTCTTAGGAGAATGAAAT  190

seq1  GCTTTGATTTCAATAGTCAATTTCCACAATGTATGTGTATCACACATGTT  229
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTGATTTCAATAGTCAATTTCCACAATGTATGTGTATCACACATGTT  240

seq1  TTACAAGATGAATGAAATAACTTACTTTATTAAAAATAATGAACAGAGTC  279
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAAGATGAATGAAATAACTTACTTTATTAAAAATAATGAACAGAGTC  290

seq1  ATAAACAACTGCTAAAAGGGATATGGAAGTAGATAATGAAGCAAAAAGAA  329
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAACAACTGCTAAAAGGGATATGGAAGTAGATAATGAAGCAAAAAGAA  340

seq1  AGACTGTGACAGGCTCAATCTGTACTTTCAAAGAAACGTTTCATTATAAA  379
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTGTGACAGGCTCAATCTGTACTTTCAAAGAAACGTTTCATTATAAA  390

seq1  ACAAAACGGGTGATAGAAAGTGATATAAATCACGCTCTAAGATTATAGTA  429
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAACGGGTGATAGAAAGTGATATAAATCACGCTCTAAGATTATAGTA  440

seq1  AGCTAACAGATATAAATAACAGTACGAACAGATATAAATGATTACTTGAT  479
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTAACAGATATAAATAACAGTACGAACAGATATAAATGATTACTTGAT  490

seq1  TTCAAAGCCTCAAATAAAGTCATGTTTCAGAGATTTAAGAAACAACTTAA  529
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAAGCCTCAAATAAAGTCATGTTTCAGAGATTTAAGAAACAACTTAA  540

seq1  GAACCAAAAAAGGTATAATTTACTAAGAATACAATTCTGAAAATATTGAT  579
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACCAAAAAAGGTATAATTTACTAAGAATACAATTCTGAAAATATTGAT  590

seq1  TCTACCCATAGGTATAATATAAACCACAATATAAACTTCCCATTATAATT  629
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACCCATAGGTATAATATAAACCACAATATAAACTTCCCATTATAATT  640

seq1  TTAAAGTTACTTTTGAAAGTAAATATGTGGTTTAATAGAATTGAAACTTC  679
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAGTTACTTTTGAAAGTAAATATGTGGTTTAATAGAATTGAAACTTC  690

seq1  AGAGAGGTTATCTGATCCAATCATTGCTCCTCTAGGGAGAGAAAAATATT  729
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGGTTATCTGATCCAATCATTGCTCCTCTAGGGAGAGAAAAATATT  740

seq1  CACATGTTATATGTATACTTTAGAACAGAAGGACATATTTGTGTATCTCC  779
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATGTTATATGTATACTTTAGAACAGAAGGACATATTTGTGTATCTCC  790

seq1  ACAAATGAATTGCATGTTTTTGCTCACAGTTACAAAACTTTTCATAAACA  829
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAATGAATTGCATGTTTTTGCTCACAGTTACAAAACTTTTCATAAACA  840

seq1  GCCCTGTCCTTTGCCAATATAAACACTATTAAACCAAACATCTGCAACTC  879
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCTGTCCTTTGCCAATATAAACACTATTAAACCAAACATCTGCAACTC  890

seq1  ATTCCTTGCCTTTCTTATTCAGAAATGCAGATATAAAAGAATAGCAATGC  929
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCTTGCCTTTCTTATTCAGAAATGCAGATATAAAAGAATAGCAATGC  940

seq1  ATTTTGCCAAAGCAATGTCCACTTGGAGAAAGTATTCTAATTCTTAAGAC  979
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTGCCAAAGCAATGTCCACTTGGAGAAAGTATTCTAATTCTTAAGAC  990

seq1  AGGAACTGACACTTACTATTTGTTTAAGGAGTAAAATGTGCAGTAAGTCT  1029
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAACTGACACTTACTATTTGTTTAAGGAGTAAAATGTGCAGTAAGTCT  1040

seq1  ATGGCATATGCCTTTAAAATTCAGTGAGTGCCCATCCATAAGCACTGAAT  1079
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCATATGCCTTTAAAATTCAGTGAGTGCCCATCCATAAGCACTGAAT  1090

seq1  GCTTATCACTACTGCTGTAGTGATAAGACTGTCACTCAGCTGAGAAGCAG  1129
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTATCACTACTGCTGTAGTGATAAGACTGTCACTCAGCTGAGAAGCAG  1140

seq1  CCCAGGAAGTTTGGGGAACAGTACTTTTGAATTC  1163
      ||||||||||||||||||||||||||||||||||
seq2  CCCAGGAAGTTTGGGGAACAGTACTTTTGAATTC  1174

seq1: chrX_22671566_22672243
seq2: B6Ng01-031B11.g_66_743

seq1  GAATTCTGTCACAGTCTTGACAAAAGTGTTCCATGAATTTAGGAAGAGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTCACAGTCTTGACAAAAGTGTTCCATGAATTTAGGAAGAGAA  50

seq1  GAAAATTAGAGAAACCTTCAGGGGAAAAAATGAAGACAAACACTTTATGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATTAGAGAAACCTTCAGGGGAAAAAATGAAGACAAACACTTTATGT  100

seq1  TTCTAGTGGCTCCTAGTCACCACAAATGGATTTTATTTTCAGTTTTAGTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAGTGGCTCCTAGTCACCACAAATGGATTTTATTTTCAGTTTTAGTT  150

seq1  TTTTCTTTTATAAGAAAAGGTGAGAAAATCTGATTCTAGTTGTACCAATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTTTTATAAGAAAAGGTGAGAAAATCTGATTCTAGTTGTACCAATT  200

seq1  TTCCCCAGAGATATCTGGAGTCTCTTTCACACAAAAAGTTTAGTGTCCAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCCAGAGATATCTGGAGTCTCTTTCACACAAAAAGTTTAGTGTCCAT  250

seq1  TTACTTTTGTTCTTACCTCTTCCTTACAACTTTCAGGTAACAAATTATTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTTTTGTTCTTACCTCTTCCTTACAACTTTCAGGTAACAAATTATTC  300

seq1  ATGTAAAAGCTGTGTCAGGAACTCAGCTCTCTCTGTACTCAAAATAATAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTAAAAGCTGTGTCAGGAACTCAGCTCTCTCTGTACTCAAAATAATAC  350

seq1  TGCCCTTCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACTCCCC  400
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  TGCCCTTCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCTCCCC  400

seq1  AGACAGCAAACAGGCCATCTGGCTGTGTCACAGATAAACCTACACAGTTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAGCAAACAGGCCATCTGGCTGTGTCACAGATAAACCTACACAGTTA  450

seq1  TAGCATTTGTGGTAGACTAACTATTGGGGACAACTTTATTCCAGGTAACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCATTTGTGGTAGACTAACTATTGGGGACAACTTTATTCCAGGTAACA  500

seq1  CTAACTCTTCAATACAGTTAAATTACTTTTTTTGGTCTCCCAGATAGCTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAACTCTTCAATACAGTTAAATTACTTTTTTTGGTCTCCCAGATAGCTT  550

seq1  TATTTTTTTTCCCATGGGAAGATAAAAATAGACACTGAGTTTGACCCCTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTTTTTCCCATGGGAAGATAAAAATAGACACTGAGTTTGACCCCTT  600

seq1  GCTACCATGATGGCTGAGCACTTACTGCAGTGTCCTTGCCCAAACTATGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTACCATGATGGCTGAGCACTTACTGCAGTGTCCTTGCCCAAACTATGT  650

seq1  GGGGTATATGTGTGTGTGTGTGTGTGTG  678
      ||||||||||||||||||||||||||||
seq2  GGGGTATATGTGTGTGTGTGTGTGTGTG  678