BAC Information

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BAC

Clone NameB6Ng01-031I01
ChromosomeX (Build37)
Map Location 122,566,198 - 122,685,357
singlet/doubletdoublet
Overlap geneEG626048
Upstream geneEG434843, EG665463, EG665522, LOC100038969, LOC100038978, EG665579, EG665611
Downstream geneLOC100040410, LOC100039903, LOC665679, 4932411N23Rik, Gm381, LOC100040472, Gm382
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-031I01.bB6Ng01-031I01.g
ACCDH861095DH861096
length977402
definitionDH861095|Mus musculus domesticus DNA, BAC clone: B6Ng01-031I01, 5' end.DH861096|Mus musculus domesticus DNA, BAC clone: B6Ng01-031I01, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(122,566,198 - 122,566,743)(122,684,950 - 122,685,357)
sequence
gaattctcaactgaggaatacagaatgtaggagaagcaaaaagatgttca
acatccttaatcatcagggaggtacaaaccaaaacaaccttggattccat
ccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagtc
gatgctggcagggatgtggagaaagaggaacactcctccattattggtga
gattgcaagctggtacaaccactctggaaatcagtctggtggttcctcag
aacattggacatagtaatacaggaagatccagcaatacctctcctgggca
tatactcagaagatgttccaacttgtaataaggacacatgctccactatg
ttcatagcagcctaatttataatagccagaagctggaatctctcacctcc
caggtctctggtgcattctagggcatccttgaaacatccgatttcctgag
tttgcctatttccattctttctgctggccctcaagacttcagtctttttc
ccttatccaataccagatcagaatccatcccccactctacccctttccac
tttccctcccatgttcattcttccctccccacttgtggttgctttcttct
gcctcccaattaggactgaggtgtcttcacttgggtacttcagcttgttg
agctctttgagttctgtggactgtatcctgtgtattctgtattttttgtt
gttgtttgtttggtttggtttggtttggttttgggtttttggctaaaatc
cattttttagtgattacataccatgaatgttcttttgtgtctgagtttcc
tcactaagcattggtatttctagtttccatctgttttgctaataaagttc
aggatgtcctcattttttttttttttttatgtcctcatcttaatagctaa
gtaggtatgctctggttcacaggaaaccagatgagcccaagaactggaag
ctactgaaactcacaaaaagtctattt
acagaccatatgaagcttaagaagagggaaagcccaaatgtggatgcttc
aatctccaatctcacttagaacattgaacaacatagtcattggaggcaga
ggtatggagggacatgtgtgaaacaggggaggtggagggaaaaaaaggag
gcagtatctggtatgaggaagacaggaaagaagccctgagggccaagaga
atgaatagaaatatctagtagtgtggcgtggggaatggggaatgggaaga
accactactaagtcccagacagcatggttgtgggaggctttcaggaccca
atgaggatgacattagacgaaatgcccaacaacagtgtgatagaacctta
agagaccctttcaagtttaaagtaaaatggttctttatgaatatatataa
ac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_122566198_122566743
seq2: B6Ng01-031I01.b_473_1021

seq1  TTGAAACATCCGATTTCCTGAGTTTGCCTATTTCCATTCTTTCTGCTGGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAACATCCGATTTCCTGAGTTTGCCTATTTCCATTCTTTCTGCTGGC  50

seq1  CCTCAAGACTTCAGTCTTTTTCCCTTATCCAATACCAGATCAGAATCCAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCAAGACTTCAGTCTTTTTCCCTTATCCAATACCAGATCAGAATCCAT  100

seq1  CCCCCCCTCTACCCCTTTCCACTTTCCCTCCCATGTTCATTCTTCCCTCC  150
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCACTCTACCCCTTTCCACTTTCCCTCCCATGTTCATTCTTCCCTCC  150

seq1  CCACTTGTGGTTGCTTTCTTCTCCCTCCCAATTAGGACTGAGGTGTCTTC  200
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  CCACTTGTGGTTGCTTTCTTCTGCCTCCCAATTAGGACTGAGGTGTCTTC  200

seq1  ACTTGGGTACTTCAGTTTGTTGAGCTCTTTGAGTTCTGTGGACTGTATCC  250
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  ACTTGGGTACTTCAGCTTGTTGAGCTCTTTGAGTTCTGTGGACTGTATCC  250

seq1  TGTGTTTTCTGTATTTTTTGTTGTTGTTTGTTTGGTTTGGTTTGGTTTGG  300
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTATTCTGTATTTTTTGTTGTTGTTTGTTTGGTTTGGTTTGGTTTGG  300

seq1  TTTTGGGTTTTTGGCTAATATCCATTTTTTAGTGAATACATACCATGAAT  350
      |||||||||||||||||| |||||||||||||||| ||||||||||||||
seq2  TTTTGGGTTTTTGGCTAAAATCCATTTTTTAGTGATTACATACCATGAAT  350

seq1  GTTCTTTTGTGTCTGAGTTACCTCACTAAGCA-TGGTATTTTCTAG-TTC  398
      ||||||||||||||||||| |||||||||||| ||||| ||||||| |||
seq2  GTTCTTTTGTGTCTGAGTTTCCTCACTAAGCATTGGTA-TTTCTAGTTTC  399

seq1  CATCTG-TTTGCCTATAAAGTTCAGGATGTCCTCA---------TTTTTT  438
      |||||| |||||  |||||||||||||||||||||         ||||||
seq2  CATCTGTTTTGCTAATAAAGTTCAGGATGTCCTCATTTTTTTTTTTTTTT  449

seq1  TATGTCCTCATTCTTAATAGCTAAGTATGTTATGCTCTGGGTCCACAGGA  488
      |||||||||| |||||||||||||||| | |||||||| ||| |||||||
seq2  TATGTCCTCA-TCTTAATAGCTAAGTA-GGTATGCTCT-GGTTCACAGGA  496

seq1  AACCCAGATGAGCCCAAGAACTGCAAAGTCTACTGAAACTCACAAAAAAG  538
      || |||||||||||||||||||| ||   |||||||||||||| ||||||
seq2  AA-CCAGATGAGCCCAAGAACTGGAA--GCTACTGAAACTCAC-AAAAAG  542

seq1  TCTTATTT  546
      || |||||
seq2  TC-TATTT  549

seq1: chrX_122684950_122685357
seq2: B6Ng01-031I01.g_65_472 (reverse)

seq1  GTTTCTATATATTCATATAGAACCATTTTACTTTATACTTGAAAGGGTCT  50
      |||| |||||||||||| ||||||||||||||||| ||||||||||||||
seq2  GTTTATATATATTCATAAAGAACCATTTTACTTTAAACTTGAAAGGGTCT  50

seq1  CTTCAGGTTCTATCACACTGTTGTTGGGCATTTCGTCTAATGTCATCCTC  100
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAAGGTTCTATCACACTGTTGTTGGGCATTTCGTCTAATGTCATCCTC  100

seq1  ATTGGGTCCTGAAAGCCTCCCACAACCATGCTGTCTGGGACTTAGTAGTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGGTCCTGAAAGCCTCCCACAACCATGCTGTCTGGGACTTAGTAGTG  150

seq1  GTTCTTCCCATTCCCCATTCCCCACGCCACACTACTAGATATTTCTATTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTTCCCATTCCCCATTCCCCACGCCACACTACTAGATATTTCTATTC  200

seq1  ATTCTCTTGGCCCTCAGGGCTTCTTTCCTGTCTTCCTCATACCAGATACT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTCTTGGCCCTCAGGGCTTCTTTCCTGTCTTCCTCATACCAGATACT  250

seq1  GCCTCCTTTTTTTCCCTCCACCTCCCCTGTTTCACACATGTCCCTCCATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCCTTTTTTTCCCTCCACCTCCCCTGTTTCACACATGTCCCTCCATA  300

seq1  CCTCTGCCTCCAATGACTATGTTGTTCAATGTTCTAAGTGAGATTGGAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTGCCTCCAATGACTATGTTGTTCAATGTTCTAAGTGAGATTGGAGA  350

seq1  TTGAAGCATCCACATTTGGGCTTTCCCTCTTCTTAAGCTTCATATGGTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAGCATCCACATTTGGGCTTTCCCTCTTCTTAAGCTTCATATGGTCT  400

seq1  GTGAATTC  408
      ||||||||
seq2  GTGAATTC  408