BAC Information

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BAC

Clone NameB6Ng01-032I15
ChromosomeX (Build37)
Map Location 159,387,231 - 159,457,194
singlet/doubletdoublet
Overlap geneCtps2, S100g
Upstream geneNhs, Reps2, LOC654358, LOC100041557, LOC667630, Rbbp7, 4932441K18Rik, LOC671250, Syap1, LOC100041607
Downstream geneLOC100040610, EG637051, Grpr, 1700045I19Rik, Ap1s2, Zrsr2, Car5b
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-032I15.bB6Ng01-032I15.g
ACCDH861846DH861847
length1,122933
definitionDH861846|Mus musculus domesticus DNA, BAC clone: B6Ng01-032I15, 5' end.DH861847|Mus musculus domesticus DNA, BAC clone: B6Ng01-032I15, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(159,456,052 - 159,457,194)(159,387,231 - 159,388,166)
sequence
gaattcagtaacacacgccctttaagaacccttttaattatgaagcagtt
ctgactttcgagtttggtgtgcaacagtcaagcagataaagtgcatcaac
aagtaccttctctattatttttaataccaccctgcctcttgttttgctat
gaaaaaaatgatttctctgtacaaaacttagtaaacgatgtttggagaca
tgctccaaggtgctatacctaaaataaactgttactcaattgtcctaaga
gcccagttttatcctttttttttcctggcttaaataaagtctatttttaa
aaagagcaattagttttgcaatgctgtacttctaggacaaagaggcggca
tatctcttttccttaaccatgttttttcttcttctgcacaaaggcagcta
atgatacaaaaacaagtcagcaaacttcctccaaatactagatttaaata
ttagattttacagactgcatatctcaatcgtagatgtctttacattatca
tctttttaaaaaatcattttagtttgccccatacaaaaaaaaaaaaaaaa
aaaaaaaagaatgggccaggcagtggtggtgcatgcctttaatcccagca
cttgggaggcaaaggcaggcggatttctgagtttgaggccagcctggtct
acagagtgagttccaggatagccagggctacacagagaaactctgcctcg
aaaaacaaaacaaaacaaacaaacaaaaaagcctgggccagccgggcatg
gtggcgcacgcctttaatcccagcactcgggaggcagaggcaggcggatt
tctgagttcgaggccagcctggtctacagagtgagttccaggacagccag
agctatacagagaaaccctgtctcaaaaaaaaaaacaaaacaaaaacaaa
acaaaaaagcctgggccaacttggcttgtaaatggtaatcgtctaagcct
tggtgtaagtatctactgtattgtatcagagaaaatgtctcttgaggctt
ttgatagctgatgcccaagtcagtaaaggagatttattacactggatgct
gcttgacagagtagactggagattccgctaccctgactctccagcttttc
catggcttcgaagtttgctaac
gaattctgattattagcttggtgccaagcatccttattcactaggccatc
ttgttagcccgatctttccattttaaataatgtaaatagggtctgtagag
atgattcagcagttaagagcacctgttcttgcagaggacctgggttcagt
tcccagcatttacaaagcagctcacaaccacctataactccagttccagg
gggatctgacctctcctttggcctttgtgggcactgcatagacatggtac
acttatatacatgcaggcaaaagattcatatacatagataaaaataaatc
ttaaaattaattaaaaatataaacaaatgtgtttgttcatctgtaactcc
tacccttttaatatgcaccatagtacatttttctcatgttttcctgattt
gttttttttttttcttaacttggtactatgtgctggagattacctcatgg
aaggatatagaaatattcatgccgttttatagctttcaattcaaaccata
atgaaccgtcacttcccagccagatggtacttttaagcctcatgctcaga
aggtctcatagcagcaaaaaaaaaaaaatccttaggaggctttaatagaa
atgtatttcctgagtaatagctgtagtggtgctgccaggaaaatgatggc
ttttctttttgaggtgctactttgagctaagaagggattttgccagtagg
tgccgctattagacagctttgtcgaggttaagtcttggatgacagctttt
aacactgtatgtgtgtgtacatgaaagaataattgacacacagggtaaaa
agttaagtctacagaaaaacgcatcaaaggatttcatttgtctcagtttg
ctttacttctcttccacagaggcaactacctttattttgtgctgttatag
ttcagaatgcatgcatgctgtgtgtgcctgtat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_159456052_159457194
seq2: B6Ng01-032I15.b_43_1164 (reverse)

seq1  GTTAGCAAACTTACGAGCAAATGGAAAAGCTGCGAGAGTCAAGGGTAAGC  50
      |||||||||||| |||    |||||||||||| ||||||| ||||| |||
seq2  GTTAGCAAACTT-CGAAGCCATGGAAAAGCTG-GAGAGTC-AGGGT-AGC  46

seq1  AGAAATTCTACAGGTCTACTTCTGTCCCAGCAGCATCCAGTTGTAAATAA  100
       |||  ||| || |||||| ||||| | |||||||||||| ||| |||||
seq2  GGAA--TCTCCA-GTCTAC-TCTGT-CAAGCAGCATCCAG-TGT-AATAA  89

seq1  AGTCTTCCTTTACTTGACTTTGGGCATCAGCTATCAAAAGCCTCAAGAGA  150
      | || |||||||| |||| |||||||||||||||||||||||||||||| 
seq2  A-TC-TCCTTTAC-TGAC-TTGGGCATCAGCTATCAAAAGCCTCAAGAG-  134

seq1  ACAATTTCTCTGATACAATACAGTAGATACTTACACCAAGGCTTAGACGA  200
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTTTCTCTGATACAATACAGTAGATACTTACACCAAGGCTTAGACGA  184

seq1  TTACCATTTACAAGCCAAGGTTGGCCCAGGCTTTTTTTGTTTTGTTTTTT  250
      |||||||||||||||||| |||||||||||| |||||||||||| |||||
seq2  TTACCATTTACAAGCCAA-GTTGGCCCAGGC-TTTTTTGTTTTG-TTTTT  231

seq1  GTTTTTGTTTTTTTTTTTTGAGACAGGGTTTCTCTGTATAGCTCTGGCTG  300
      |||||   ||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTT--GTTTTTTTTTTTGAGACAGGGTTTCTCTGTATAGCTCTGGCTG  279

seq1  TCCTGGAACTCACTCTGTAGACCAGGCTGGCCTCGAACTCAGAAATCCGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGGAACTCACTCTGTAGACCAGGCTGGCCTCGAACTCAGAAATCCGC  329

seq1  CTGCCTCTGCCTCCCGAGTGCTGGGATTAAAGGCGTGCGCCACCATGCCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCTCTGCCTCCCGAGTGCTGGGATTAAAGGCGTGCGCCACCATGCCC  379

seq1  GGCTGGCCCAGGCTTTTTTGTTTGTTTGTTTTGTTTTGTTTTTCGAGGCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGGCCCAGGCTTTTTTGTTTGTTTGTTTTGTTTTGTTTTTCGAGGCA  429

seq1  GAGTTTCTCTGTGTAGCCCTGGCTATCCTGGAACTCACTCTGTAGACCAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTTCTCTGTGTAGCCCTGGCTATCCTGGAACTCACTCTGTAGACCAG  479

seq1  GCTGGCCTCAAACTCAGAAATCCGCCTGCCTTTGCCTCCCAAGTGCTGGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGCCTCAAACTCAGAAATCCGCCTGCCTTTGCCTCCCAAGTGCTGGG  529

seq1  ATTAAAGGCATGCACCACCACTGCCTGGCCCATTCTTTTTTTTTTTTTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAAGGCATGCACCACCACTGCCTGGCCCATTCTTTTTTTTTTTTTTT  579

seq1  TTTTTTTTTGTATGGGGCAAACTAAAATGATTTTTTAAAAAGATGATAAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTGTATGGGGCAAACTAAAATGATTTTTTAAAAAGATGATAAT  629

seq1  GTAAAGACATCTACGATTGAGATATGCAGTCTGTAAAATCTAATATTTAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAAGACATCTACGATTGAGATATGCAGTCTGTAAAATCTAATATTTAA  679

seq1  ATCTAGTATTTGGAGGAAGTTTGCTGACTTGTTTTTGTATCATTAGCTGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTAGTATTTGGAGGAAGTTTGCTGACTTGTTTTTGTATCATTAGCTGC  729

seq1  CTTTGTGCAGAAGAAGAAAAAACATGGTTAAGGAAAAGAGATATGCCGCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGTGCAGAAGAAGAAAAAACATGGTTAAGGAAAAGAGATATGCCGCC  779

seq1  TCTTTGTCCTAGAAGTACAGCATTGCAAAACTAATTGCTCTTTTTAAAAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTGTCCTAGAAGTACAGCATTGCAAAACTAATTGCTCTTTTTAAAAA  829

seq1  TAGACTTTATTTAAGCCAGGAAAAAAAAAGGATAAAACTGGGCTCTTAGG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGACTTTATTTAAGCCAGGAAAAAAAAAGGATAAAACTGGGCTCTTAGG  879

seq1  ACAATTGAGTAACAGTTTATTTTAGGTATAGCACCTTGGAGCATGTCTCC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATTGAGTAACAGTTTATTTTAGGTATAGCACCTTGGAGCATGTCTCC  929

seq1  AAACATCGTTTACTAAGTTTTGTACAGAGAAATCATTTTTTTCATAGCAA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACATCGTTTACTAAGTTTTGTACAGAGAAATCATTTTTTTCATAGCAA  979

seq1  AACAAGAGGCAGGGTGGTATTAAAAATAATAGAGAAGGTACTTGTTGATG  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAGAGGCAGGGTGGTATTAAAAATAATAGAGAAGGTACTTGTTGATG  1029

seq1  CACTTTATCTGCTTGACTGTTGCACACCAAACTCGAAAGTCAGAACTGCT  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTTATCTGCTTGACTGTTGCACACCAAACTCGAAAGTCAGAACTGCT  1079

seq1  TCATAATTAAAAGGGTTCTTAAAGGGCGTGTGTTACTGAATTC  1143
      |||||||||||||||||||||||||||||||||||||||||||
seq2  TCATAATTAAAAGGGTTCTTAAAGGGCGTGTGTTACTGAATTC  1122

seq1: chrX_159387231_159388166
seq2: B6Ng01-032I15.g_70_1002

seq1  GAATTCTGATTATTAGCTTGGTGCCAAGCATCCTTATTCACTAGGCCATC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGATTATTAGCTTGGTGCCAAGCATCCTTATTCACTAGGCCATC  50

seq1  TTGTTAGCCCGATCTTTCCATTTTAAATAATGTAAATAGGGTCTGTAGAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTAGCCCGATCTTTCCATTTTAAATAATGTAAATAGGGTCTGTAGAG  100

seq1  ATGATTCAGCAGTTAAGAGCACCTGTTCTTGCAGAGGACCTGGGTTCAGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATTCAGCAGTTAAGAGCACCTGTTCTTGCAGAGGACCTGGGTTCAGT  150

seq1  TCCCAGCATTTACAAAGCAGCTCACAACCACCTATAACTCCAGTTCCAGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAGCATTTACAAAGCAGCTCACAACCACCTATAACTCCAGTTCCAGG  200

seq1  GGGATCTGACCTCTCCTTTGGCCTTTGTGGGCACTGCATAGACATGGTAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATCTGACCTCTCCTTTGGCCTTTGTGGGCACTGCATAGACATGGTAC  250

seq1  ACTTATATACATGCAGGCAAAAGATTCATATACATAGATAAAAATAAATC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTATATACATGCAGGCAAAAGATTCATATACATAGATAAAAATAAATC  300

seq1  TTAAAATTAATTAAAAATATAAACAAATGTGTTTGTTCATCTGTAACTCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAATTAATTAAAAATATAAACAAATGTGTTTGTTCATCTGTAACTCC  350

seq1  TACCCTTTTAATATGCACCATAGTACATTTTTCTCATGTTTTCCTGATTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCCTTTTAATATGCACCATAGTACATTTTTCTCATGTTTTCCTGATTT  400

seq1  GTTTTTTTTTTTTCTTAACTTGGTACTATGTGCTGGAGATTACCTCATGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTTTTTTTTTCTTAACTTGGTACTATGTGCTGGAGATTACCTCATGG  450

seq1  AAGGATATAGAAATATTCATGCCGTTTTATAGCTTTCAATTCAAACCATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGATATAGAAATATTCATGCCGTTTTATAGCTTTCAATTCAAACCATA  500

seq1  ATGAACCGTCACTTCCCAGCCAGATGGTACTTTTAAGCCTCATGCTCAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAACCGTCACTTCCCAGCCAGATGGTACTTTTAAGCCTCATGCTCAGA  550

seq1  AGGTCTCATAGCAGCAAAAAAAAAAAAATCCTTAGGAGGCTTTAATAGAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCTCATAGCAGCAAAAAAAAAAAAATCCTTAGGAGGCTTTAATAGAA  600

seq1  ATGTATTTCCTGAGTAATAGCTGTAGTGGTGCTGCCAGGAAAATGATGGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTATTTCCTGAGTAATAGCTGTAGTGGTGCTGCCAGGAAAATGATGGC  650

seq1  TTTTCTTTTTGAGGTGCTACTTTGAGCTAAGAAGGGATTTTGCCAGTAGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTTTTTGAGGTGCTACTTTGAGCTAAGAAGGGATTTTGCCAGTAGG  700

seq1  TGCCGCTATTAGACAGCTTTGTCGAGGTTAAGTCTTGGATGACAGCTTTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCGCTATTAGACAGCTTTGTCGAGGTTAAGTCTTGGATGACAGCTTTT  750

seq1  AACACTGTATGTGTGTGTACATGAAAGAATAATTGACACACAGGGTAAAA  800
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  AACACTGTATGTGTGTGTACATGAAAGAATAATTGACACACAGGGT-AAA  799

seq1  AAGTTAAGTCTACAGAAAAACGCATCAAAGGATTTCATTTGTCTCAGTTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTAAGTCTACAGAAAAACGCATCAAAGGATTTCATTTGTCTCAGTTT  849

seq1  GCTTTACTTCTCTTCCACAGAGGCAACTACCTTTATTTTGTGCTGTTATT  900
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  GCTTTACTTCTCTTCCACAGAGGCAACTACCTTTATTTTGTGCTGTTA-T  898

seq1  AGTTCAGGAATGCATGCATGCTGTGTGTGCCTGTAT  936
      |||||| |||||||||||||||||||||||||||||
seq2  AGTTCA-GAATGCATGCATGCTGTGTGTGCCTGTAT  933