BAC Information

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BAC

Clone NameB6Ng01-036B05
ChromosomeX (Build37)
Map Location 31,104,964 - 31,105,995
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100039224, LOC100039500, LOC100040448, LOC100040458, LOC100040467, EG546176, LOC100040482, LOC629997, 1700017G21Rik, LOC665014, EG546205, LOC100040533, LOC100039328, LOC100040552
Downstream geneLOC100040575, LOC100040585, LOC100039362, LOC100040606, LOC100040612, LOC673784, LOC100040650, LOC100040662, LOC100039419, LOC100039429, LOC100040698, LOC630028, LOC100040722, LOC100040732, LOC100040743, LOC385298, LOC100039460
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-036B05.bB6Ng01-036B05.g
ACCDH864367DH864368
length1,1811,004
definitionDH864367|Mus musculus domesticus DNA, BAC clone: B6Ng01-036B05, 5' end.DH864368|Mus musculus domesticus DNA, BAC clone: B6Ng01-036B05, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgtttatctctgtaccccatttttattgggattatttgattt
tctggaatccagattcttgagttttttgtatatattggatattagtcacc
tatcagatttaggattggtaaagaccctttcccaatctgttggtaggttt
tttgtcttactaacagtgtctttttcttacggaagtttgcaattttatga
ggtcccacttgtcaattattgatcttactgaaaaaaagcatggctgttct
gttcaggaattttttcctctgttcccatccatatctttaaagattttccc
cactttctcctctataagtttcagagtctctgcttttatggggaagtcct
ttatccacttagatttgaggtttgtacaaggagataaaaatgggtcaatt
ctcattcttctacatgataacctccagatgtgccaacagcatttgttgaa
aatgctgactttttcccactggatggtcttagctcccttgtcaatactca
agtgtgtggattcatttctgggtcttctactctattccattgatctaccc
ggcttttgctgtaccagtaccatgtagtttttatcacaattgctctgtaa
tacagcttgaggtcaggcatagtgattccaccagaggttcttttattgtt
gagaatactttttgttatcctagtttttttgttgttgttgttattccaga
tgaatttgcacattgccctttctaacttagtgaagaactgagttggaatt
ttgatggggattgcattgaatcattagattgccttcagcaagatagtcat
ttttactatattaatcctgccaatccatgagtattgggcgatcattaaat
cttctggagatcttctttgatttctttcttcagagacctgaagatcttat
catagagatcttttacttccttagttagagtcacactacgtatttgatat
atttgtgactatatgaggtttgttccctaatttcttttcagctgtttatc
tttatgtaagaagacactgattttgagttattaatcagctactcactgga
actgttatagtgtgagttcctggtgaattaagcctatggaacctactttt
caaaggaattgaccttccttccatgatccatatcccttggtccatgtggc
tgacattcagctattgaatgggaaaagtgga
gaattctttgtttagctctgtaccccatttttaatggggttatttgaatt
tatggagtctagcttctaagctctttgtttatataatacaaatatataaa
tacaaatactaatatattggatattagtcccctatcagatttagggttgg
gaaaaatgttttcccactctgttggtggcctttttgtcttattgacagag
acactgaaatttatagaggagtaagtggggaaaagcctcgaagatatggg
cacatgggaaaaattcctgaacagaacagcaatggcttggtctgtaaaat
caagaatcgacaaatgggacctcataaaattgcaaagcttctgtaaggca
cattgtttttgacaaatcagtttcctttagactacaccttcaagccactt
aaggttgtatttacaacaaaaatttatcatctaaatatcaacagtaatgg
cagcatttatcttgataatctcagatcacagtgtctcctgctttaactat
ttctaatgttcatttatccatttgttcactgctatgtgatccaaaccctg
atgacctcctagtgccagagactgcacagatctaaaacagatagtgataa
atacaacagaatatcttgggaatggactcagaagtatgccatgtgatgtt
acctttaagtcagaataactcgcattttatagctgggaataaacttcaaa
ttcctattttttttttgatctctgtttttctttttttttcttttgtttat
ttccctcctttcattcacatgtttatctaagagactaaatctttcagttt
agacaataactactttaaaactgcaagtagtacagaaaacagttgcccag
attcgaatctttttaaaactggagctgtccgatactattagccagatgag
aagtgtttgatactgggtttctctgtgtagcacatctgttgtgaactcac
ttgtaaatcaggctgtctcaactccagagatctacctgctctgccttgag
tgct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_31104964_31105995
seq2: B6Ng01-036B05.g_67_1070 (reverse)

seq1  AGCACTCAAGAGGCAGAGGCAGGTAGATCTCTGTGAGTTTGAGGCCAGCC  50
      ||||||||  ||||||| ||||||||||||||| ||| |||| | |||||
seq2  AGCACTCA--AGGCAGA-GCAGGTAGATCTCTG-GAG-TTGA-GACAGCC  44

seq1  TGATTTACAAAGTGAGTTCCACAACAGATGTGGCTACACAGAGAAACACA  100
      |||||||| ||||||||| |||||||||||| ||||||||||||||| ||
seq2  TGATTTAC-AAGTGAGTT-CACAACAGATGT-GCTACACAGAGAAACCCA  91

seq1  GTATCAAACACTGTCTCATCCTTGGCTACATATGTATCTGGACAAGCTCC  150
      |||||||||||| |||||||  |||||| ||| ||||| |||| ||||||
seq2  GTATCAAACACT-TCTCATC--TGGCTA-ATA-GTATC-GGAC-AGCTCC  134

seq1  AGTTTTTTAAAAAGATTCTGAATCTTGGGCAACTGTTTTCTTGTAACTAC  200
      ||  |||||||||||||| ||||| ||||||||||||||| ||| |||||
seq2  AG--TTTTAAAAAGATTC-GAATC-TGGGCAACTGTTTTC-TGT-ACTAC  178

seq1  TTTGCAGATTCTAAAAGTAGTTATTGTCTAAAGCTGAAAGAATTTAAGTC  250
       ||||||  | | ||||||||||||||||||| ||||||||  || ||||
seq2  -TTGCAG--TTTTAAAGTAGTTATTGTCTAAA-CTGAAAGA--TTTAGTC  222

seq1  TCTTAGATAAACATGTGAATGAAAGGAGGGAAATAAACAAAAAGAAAAAA  300
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  TCTTAGATAAACATGTGAATGAAAGGAGGGAAATAAAC-AAAAGAAAAAA  271

seq1  AAAGAAAAACATGAGATC-AAAAAAAAATAGGAATTTGAAGTTTATT-CC  348
      ||||||||||| |||||| |||||||||||||||||||||||||||| ||
seq2  AAAGAAAAACA-GAGATCAAAAAAAAAATAGGAATTTGAAGTTTATTCCC  320

seq1  AGCTATAAAATGCGAGTTATTCTGACTTTAAGGTAACATCACATGGCATA  398
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  AGCTATAAAATGCGAGTTATTCTGACTTAAAGGTAACATCACATGGCATA  370

seq1  CTTCTGAGTCCATTCCCAAGATATTCTGTTGTATTTATCACTATCTGTTT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTGAGTCCATTCCCAAGATATTCTGTTGTATTTATCACTATCTGTTT  420

seq1  TAGATCTGTGCAGTCTCTGGCACTAGGAGGTCATCAGGGTTTGGATCACA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATCTGTGCAGTCTCTGGCACTAGGAGGTCATCAGGGTTTGGATCACA  470

seq1  TAGCAGTGAACAAATGGATAAATGAACATTAGAAATAGTTAAAGCAGGAG  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCAGTGAACAAATGGATAAATGAACATTAGAAATAGTTAAAGCAGGAG  520

seq1  ACACTGTGATCTGAGATTATCAAGATAAATGCTGCCATTACTGTTGATAT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTGTGATCTGAGATTATCAAGATAAATGCTGCCATTACTGTTGATAT  570

seq1  TTAGATGATAAATTTTTGTTGTAAATACAACCTTAAGTGGCTTGAAGGTG  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGATGATAAATTTTTGTTGTAAATACAACCTTAAGTGGCTTGAAGGTG  620

seq1  TAGTCTAAAGGAAACTGATTTGTCAAAAACAATGTGCCTTACAGAAGCTT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTCTAAAGGAAACTGATTTGTCAAAAACAATGTGCCTTACAGAAGCTT  670

seq1  TGCAATTTTATGAGGTCCCATTTGTCGATTCTTGATTTTACAGACCAAGC  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAATTTTATGAGGTCCCATTTGTCGATTCTTGATTTTACAGACCAAGC  720

seq1  CATTGCTGTTCTGTTCAGGAATTTTTCCCATGTGCCCATATCTTCGAGGC  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGCTGTTCTGTTCAGGAATTTTTCCCATGTGCCCATATCTTCGAGGC  770

seq1  TTTTCCCCACTTACTCCTCTATAAATTTCAGTGTCTCTGTCAATAAGACA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCCCCACTTACTCCTCTATAAATTTCAGTGTCTCTGTCAATAAGACA  820

seq1  AAAAGGCCACCAACAGAGTGGGAAAACATTTTTCCCAACCCTAAATCTGA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGGCCACCAACAGAGTGGGAAAACATTTTTCCCAACCCTAAATCTGA  870

seq1  TAGGGGACTAATATCCAATATATTAGTATTTGTATTTATATATTTGTATT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGGGACTAATATCCAATATATTAGTATTTGTATTTATATATTTGTATT  920

seq1  ATATAAACAAAGAGCTTAGAAGCTAGACTCCATAAATTCAAATAACCCCA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAAACAAAGAGCTTAGAAGCTAGACTCCATAAATTCAAATAACCCCA  970

seq1  TTAAAAATGGGGTACAGAGCTAAACAAAGAATTC  1032
      ||||||||||||||||||||||||||||||||||
seq2  TTAAAAATGGGGTACAGAGCTAAACAAAGAATTC  1004