BAC Information

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BAC

Clone NameB6Ng01-036L14
ChromosomeX (Build37)10 (Build37)
Map Location 88,695,366 - 88,695,8845,811,696 - 5,812,664
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneLOC629471, LOC100041815, Gm44, LOC670074, LOC667972, LOC667976, Mageb2, EG278167
Downstream geneEG667988, EG667993, EG385489, 1700084M14Rik, EG236891, LOC629542, Mageb5, LOC673766, LOC633484, LOC674396, EG278087, Mageb1, EG236892, EG236893, Mageb18, EG436259, EG668061
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-036L14.bB6Ng01-036L14.g
ACCDH864806DH864807
length633960
definitionDH864806|Mus musculus domesticus DNA, BAC clone: B6Ng01-036L14, 5' end.DH864807|Mus musculus domesticus DNA, BAC clone: B6Ng01-036L14, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(88,695,366 - 88,695,884)(5,811,696 - 5,812,664)
sequence
gaattcttttttttttttccatttttattaggtatttagctcatttacat
ttccaatgctataccaaaagtcccccatacccacccacccccactcccct
acccccccactccccctttttggccctggcgttcccctgcactggggcat
ataaagtttgcgtgtccaatgggcctctctttccagtgatggccgactag
gccatcttttgatacatatgcagctagagtcaagagctctggggtactgg
ttagttcataatgttgttccacatatagggttgcagatccctttagctcc
ttgggtactttctctagctcctccattgggagccctgtgatccatccatt
agctgactgtgagcatccacttctgtgtttgctaggccccggcatagtct
cacaagagacagctacatctgggtcctttcgataaaatcttgctagtata
tgcaatggtgtcagcgtttggatgctgattatggagtggatccctggata
tggcagtctctacatggtccatcctttcatctcagctccaaactttgtct
ttgtaactccttccatgggtgttttgcttgcatgaattcttaataggaaa
ggtttaaaattattttgggctttcccgcttgca
gaattcattgagactagggaaatgaccccatgcttatagtactcactgtg
ggactccagaagtgacattaagcagcaatacctatctatgggcctggtgg
cttgcctataattttagccttgaaaggcagagacagagactctccagagc
aagctgactagtgaggctaaccacatcaccaagctctggggttgggtagt
tacctccagtcagcacaggcccaggcccctacatgctcccagacacatgc
agatacacacatacagcacgcagacacgtggatgtagaggagggagaaga
gacaaagaaaatgagaaagaaagtcattgaaagtttcagagtcctggggg
agttcacgccaccatgcgtaaatactttggagaaacaggattcagcttgg
acatctccaagtccatgaatgatggccaactccaagaatgactcccacct
tcctatgtacagctggaagtggaacaaacatgctccattatatgttaact
aattccaatggctgctgaatatgctgagcgacggctgagagcgttttgca
aaaggccatggcctactcacccttctctggctctcctcctcaatgcctag
ctctcgaatcctctccaatatggcatcctctgtgggtttcagctgtgtcg
aatctgctgcaaagaagagcttgtgagtttctccctgaagcagagttccg
gctctgcgaggctgtggtggcctccctgctggccttcaagctcacatcca
gctcctggcagcgtttcctcagctgggtcagctcctgcttcgaggcatcc
caggcttcggctgagagcagcagccgttcttggttagagcttcacttccc
tttctgagctgttctcccttccacagcactgagcaagttctgaagtaccg
attgaaccgtagcagtatgttgcattcggaaatattccctggctgcttac
agtgaccgaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_88695366_88695884
seq2: B6Ng01-036L14.b_41_552 (reverse)

seq1  AGAGACTGCCATATCCAGGGATCCACCCCATAATCAGCATCCAAACGCTG  50
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  AGAGACTGCCATATCCAGGGATCCACTCCATAATCAGCATCCAAACGCTG  50

seq1  ACACCATTGCATACACTAGCAAGATTTTATCGAAAGGACCCAGATGTAGC  100
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  ACACCATTGCATATACTAGCAAGATTTTATCGAAAGGACCCAGATGTAGC  100

seq1  TGTCTCTTGTGAGACTATGCCGGGGCCTAGCAAACACAGAAGTGGATGCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTCTTGTGAGACTATGCCGGGGCCTAGCAAACACAGAAGTGGATGCT  150

seq1  CACAGTCAGCTAATGGATGGATCACAGGGCTCCCAATGGAGGAGCTAGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGTCAGCTAATGGATGGATCACAGGGCTCCCAATGGAGGAGCTAGAG  200

seq1  AAAGTACCCAAGGAGCTAAAGAGATCTGCAACCCTATAGGTGGAACAACA  250
      ||||||||||||||||||||| |||||||||||||||| |||||||||||
seq2  AAAGTACCCAAGGAGCTAAAGGGATCTGCAACCCTATATGTGGAACAACA  250

seq1  TTATGAACTAACCAGTACCCCGGAGCTCTTGACTCTAGCTGCATATGTAT  300
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  TTATGAACTAACCAGTACCCCAGAGCTCTTGACTCTAGCTGCATATGTAT  300

seq1  CAAAAGATGGCCTAGTCGGCCATCACTGGAAAGAGAGGCCCATTGGACAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAGATGGCCTAGTCGGCCATCACTGGAAAGAGAGGCCCATTGGACAC  350

seq1  GCAGACTTTATATGCCCCAGTACAGGGGAACGCCAGGGCCAAAAAGGGGG  400
      ||| ||||||||||||||||| ||||||||||||||||||||||||||||
seq2  GCAAACTTTATATGCCCCAGTGCAGGGGAACGCCAGGGCCAAAAAGGGGG  400

seq1  AGTGGGTGGGTAGGGGAGTGGGGGTGGGTGGGTATGGGGGACTTTTGGTA  450
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGGGGGGTAGGGGAGTGGGGGTGGGTGGGTATGGGGGACTTTTGGTA  450

seq1  TAGCATTGGAAATGTAAATGAGCTAAATACCTAATAAAATTGGAAAAAAA  500
      ||||||||||||||||||||||||||||||||||||||| |||||     
seq2  TAGCATTGGAAATGTAAATGAGCTAAATACCTAATAAAAATGGAA-----  495

seq1  GGAAAAAAAAAAGAATTCC  519
        |||||||||||||||||
seq2  --AAAAAAAAAAGAATTCC  512

seq1: chr10_5811696_5812664
seq2: B6Ng01-036L14.g_70_1029

seq1  GAATTCATTGAGACTAGGGAAATGACCCCATGCTTATAGTACTCACTGTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTGAGACTAGGGAAATGACCCCATGCTTATAGTACTCACTGTG  50

seq1  GGACTCCAGAAGTGACATTAAGCAGCAATACCTATCTATGGGCCTGGTGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACTCCAGAAGTGACATTAAGCAGCAATACCTATCTATGGGCCTGGTGG  100

seq1  CTTGCCTATAATTTTAGCCTTGAAAGGCAGAGACAGAGACTCTCCAGAGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCCTATAATTTTAGCCTTGAAAGGCAGAGACAGAGACTCTCCAGAGC  150

seq1  AAGCTGACTAGTGAGGCTAACCACATCACCAAGCTCTGGGGTTGGGTAGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTGACTAGTGAGGCTAACCACATCACCAAGCTCTGGGGTTGGGTAGT  200

seq1  TACCTCCAGTCAGCACAGGCCCAGGCCCCTACATGCTCCCAGACACATGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTCCAGTCAGCACAGGCCCAGGCCCCTACATGCTCCCAGACACATGC  250

seq1  AGATACACACATACAGCACGCAGACACGTGGATGTAGAGGAGGGAGAAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATACACACATACAGCACGCAGACACGTGGATGTAGAGGAGGGAGAAGA  300

seq1  GACAAAGAAAATGAGAAAGAAAGTCATTGAAAGTTTCAGAGTCCTGGGGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAAAGAAAATGAGAAAGAAAGTCATTGAAAGTTTCAGAGTCCTGGGGG  350

seq1  AGTTCACGCCACCATGCGTAAATACTTTGGAGAAACAGGATTCAGCTTGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCACGCCACCATGCGTAAATACTTTGGAGAAACAGGATTCAGCTTGG  400

seq1  ACATCTCCAAGTCCATGAATGATGGCCAACTCCAAGAATGACTCCCACCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCTCCAAGTCCATGAATGATGGCCAACTCCAAGAATGACTCCCACCT  450

seq1  TCCTATGTACAGCTGGAAGTGGAACAAACATGCTCCATTATATGTTAACT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTATGTACAGCTGGAAGTGGAACAAACATGCTCCATTATATGTTAACT  500

seq1  AATTCCAATGGCTGCTGAATATGCTGAGCGACGGCTGAGAGCG-TTTGCA  549
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  AATTCCAATGGCTGCTGAATATGCTGAGCGACGGCTGAGAGCGTTTTGCA  550

seq1  AAAGGCCATGGCCTACTCACCCTTCTCTGGCTCTCCTCCTCAATGCCTAG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGCCATGGCCTACTCACCCTTCTCTGGCTCTCCTCCTCAATGCCTAG  600

seq1  CTCTCGAATCCTCTCCAATATGGCATCCTCTGT-GGATTCAGCTGTGTCG  648
      ||||||||||||||||||||||||||||||||| || |||||||||||||
seq2  CTCTCGAATCCTCTCCAATATGGCATCCTCTGTGGGTTTCAGCTGTGTCG  650

seq1  AATCTGCTGCAAAGAAGAGC-TGTGAGTTTCTCCCTGAAGCAGGAGTTCC  697
      |||||||||||||||||||| ||||||||||||||||||||| |||||||
seq2  AATCTGCTGCAAAGAAGAGCTTGTGAGTTTCTCCCTGAAGCA-GAGTTCC  699

seq1  GGCTCTGCGAGGCTGTGGTGGCCTCCCTGCTGGCCTTCAAGCTCACATCC  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTCTGCGAGGCTGTGGTGGCCTCCCTGCTGGCCTTCAAGCTCACATCC  749

seq1  AGCTCCTGGCAGCGTTTCCTCAGCTGGGTCAGCTCCTGCTTCGAGGCATC  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCCTGGCAGCGTTTCCTCAGCTGGGTCAGCTCCTGCTTCGAGGCATC  799

seq1  CCAGGCT--CGCTGAGATGCAAGCAGCCGTTCTTGG-TAGAGCTTCACTT  844
      |||||||   ||||||| || ||||||||||||||| |||||||||||||
seq2  CCAGGCTTCGGCTGAGA-GC-AGCAGCCGTTCTTGGTTAGAGCTTCACTT  847

seq1  CCCTTTCTAGAGCTGTTCTCCCCTCCACAGCACTGAGCAAGTCCTGAAAG  894
      |||||||| ||||||||||||| ||||||||||||||||||| |||||  
seq2  CCCTTTCT-GAGCTGTTCTCCCTTCCACAGCACTGAGCAAGTTCTGAA--  894

seq1  TTACCGAATGAAAACAGTAGCAGGTATGTCTGCATTCGGAAAAGTATTCC  944
       |||||| ||  ||| |||||| |||||| ||||||||||||  ||||||
seq2  GTACCGATTG--AACCGTAGCA-GTATGT-TGCATTCGGAAA--TATTCC  938

seq1  CTTGGCTGCTTACCAGTGACTCGAA  969
      | |||||||||| ||||||| ||||
seq2  C-TGGCTGCTTA-CAGTGAC-CGAA  960