BAC Information

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BAC

Clone NameB6Ng01-040L08
ChromosomeX (Build37)
Map Location 96,796,708 - 96,797,855
singlet/doubletsinglet
Overlap genenone
Upstream geneOphn1, Yipf6, LOC100042932, Stard8, LOC436219, Efnb1, Pja1
Downstream geneLOC100042947, Pcna-ps1, EG620592, Eda, Dgat2l4, Otud6a, Igbp1, LOC668257, Dgat2l3, LOC620734, P2ry4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-040L08.bB6Ng01-040L08.g
ACCDH867589DH867590
length9641,131
definitionDH867589|Mus musculus domesticus DNA, BAC clone: B6Ng01-040L08, 5' end.DH867590|Mus musculus domesticus DNA, BAC clone: B6Ng01-040L08, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcactcttgcacttgcacataaggcttgtttactagttaggcgcag
tgaaagccagcgccatcttataatggcgattgctcacggcacggttctcc
acatgtgtccttattacatgttggagcatcttctgggtatatgcccagga
gtggtattgctggatcttccggtagtactatgtccaattttctgaggact
gatttccagagtggttgtaccagctttcaatcccaccagcaatggaggat
tgttcctctttctccacatctgtgccagcatctgctgtcacctgagtttt
ttatcttagccattctgattggtgtgaggtggaatctcagggttgttttg
atttgcattttgctgatgactaaggatgttgaacatttctttaggtgctt
ctcaggcattcagtattcctcagttgagaattctttgtttggctctattc
ttcattttaatagggttaattggttctctggagtctaacttcttgagttt
attgtatatattagatattaaccatctatcagatataggactggtaaaga
tcttttcccaatctgttggttgccactttgtcctattgacagtgtccttt
gccttacagaagctgtgcaattttatgaggtccctattagtcaaatcttg
atcttagagaataagctattggtgttctgttcaggaaaatttcctctgtg
cccatgtcctcggggctcttccccactttcttttctattagtttcagtgt
atctggtttatgtggaggtccttgatccacttggacttgagctttgtaca
aggagataagaatgaattgatttgcattcttctacatgctcactgccagt
tgaaccacaccattttgttgacaatactgtctttcttccactggatggtt
ttagttcccttgtcaagatcaagtgactgtaggtttgtgggttcatttct
gggtctcagtctat
gaattcagagctgagaaataaaccttggcatacattgtctaatgattttt
tttttacttcctttttgagatagtgtcttggtgtgtagccagccaggcct
agatctttctgtgtagccagccaggcctagaaatcaagattctcttgcct
ctgcttctggaatgctgggattagaggcctacaccatcacaccagactaa
ttgtgcatattttatgaaaacggaggagtctatgaaccctctgatcatgt
ctgtccgtgaacttgtgtgtgatcagttccctggtgtcctgctgttcatt
gtcaccctgaggagacactgccctatttgtgcctctcctcataaggcatg
tgtttactgagtgctccctaggtgccagacactggcatgacagcagaagt
gggggtgagaagcagaggtttaggcttcagtggacttcggaagaactgaa
gaaatgcgaatacatcatcaccagggaagatgtcaccctgccccaggatg
gatggtggatggaaaagagtcctctatgttcagcagctgtgggatgcaat
cctggacagagatctggcaagcgagcaggctctgtgctgctctcgagtct
gtatcagagtcgccaggtgacctcagctccatgcttttcctactggagtc
taagattttcctcagtaccggcagcagggcaagatgaggcacccgtctct
actgtctatgatcctgagatcaggcttggaagaatgcagacataacctca
tcacccagagccaggactttctcccttaccatgggattgctgctccccag
tgggctcagtccccaaggctgccaggagtgcttatgaaagacccagtgca
agcccgttggctgagagcaggatggcaaagaagagccctgaattctctgc
tggctcttagcatattcctcatgttccttctggccctcttctccagatcc
tactcccactcagtcagccctcctcacacccaagtataaatataaaaata
aataacacgagccagccttagactgaagcaattgctggcagcgcttgccg
ctgataactgcatagtgacgtgcaactgggctatatcgaaaatatgcgtt
ttccctcggaaaactatcgcgtggcccggcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_96796708_96797855
seq2: B6Ng01-040L08.g_70_1200

seq1  GAATTCAGAGCTGAGAAATAAACCTTGGCATACATTGTCTAATGATTTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGAGCTGAGAAATAAACCTTGGCATACATTGTCTAATGATTTTT  50

seq1  TTTTTACTTCCTTTTTGAGATAGTGTCTTGGTGTGTAGCCAGCCAGGCCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTACTTCCTTTTTGAGATAGTGTCTTGGTGTGTAGCCAGCCAGGCCT  100

seq1  AGATCTTTCTGTGTAGCCAGCCAGGCCTAGAAATCAAGATTCTCTTGCCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCTTTCTGTGTAGCCAGCCAGGCCTAGAAATCAAGATTCTCTTGCCT  150

seq1  CTGCTTCTGGAATGCTGGGATTAGAGGCCTACACCATCACACCAGACTAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTTCTGGAATGCTGGGATTAGAGGCCTACACCATCACACCAGACTAA  200

seq1  TTGTGCATATTTTATGAAAACGGAGGAGTCTATGAACCCTCTGATCATGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGCATATTTTATGAAAACGGAGGAGTCTATGAACCCTCTGATCATGT  250

seq1  CTGTCCGTGAACTTGTGTGTGATCAGTTCCCTGGTGTCCTGCTGTTCATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCCGTGAACTTGTGTGTGATCAGTTCCCTGGTGTCCTGCTGTTCATT  300

seq1  GTCACCCTGAGGAGACACTGCCCTATTTGTGCCTCTCCTCATAAGGCATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCACCCTGAGGAGACACTGCCCTATTTGTGCCTCTCCTCATAAGGCATG  350

seq1  TGTTTACTGAGTGCTCCCTAGGTGCCAGACACTGGCATGACAGCAGAAGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTACTGAGTGCTCCCTAGGTGCCAGACACTGGCATGACAGCAGAAGT  400

seq1  GGGGGTGAGAAGCAGAGGTTTAGGCTTCAGTGGACTTCGGAAGAACTGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGGTGAGAAGCAGAGGTTTAGGCTTCAGTGGACTTCGGAAGAACTGAA  450

seq1  GAAATGCGAATACATCATCACCAGGGAAGATGTCACCCTGCCCCAGGATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATGCGAATACATCATCACCAGGGAAGATGTCACCCTGCCCCAGGATG  500

seq1  GATGGTGGATGGAAAAGAGTCCTCTATGTTCAGCAGCTGTGGGATGCAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGTGGATGGAAAAGAGTCCTCTATGTTCAGCAGCTGTGGGATGCAAT  550

seq1  CCTGGACAGAGATCTGGCAAGCGAGCAGGCTCTGTGCTGCTCTCGAGTCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGACAGAGATCTGGCAAGCGAGCAGGCTCTGTGCTGCTCTCGAGTCT  600

seq1  GTATCAGAGTCGCCAGGTGACCTCAGCTCCATGCTTTTCCTACTGGAGTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATCAGAGTCGCCAGGTGACCTCAGCTCCATGCTTTTCCTACTGGAGTC  650

seq1  TAAGATTTTCCTCAGTACCGGCAGCAGGGCAAGATGAGGCACCCGTCTCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGATTTTCCTCAGTACCGGCAGCAGGGCAAGATGAGGCACCCGTCTCT  700

seq1  ACTGTCTATGATCCTGAGATCAGGCTTGGAAGAATGCAGACATAACCTCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTCTATGATCCTGAGATCAGGCTTGGAAGAATGCAGACATAACCTCA  750

seq1  TCACCCAGAGCCAGGACTTTCTCCCTTACCATGGGATTGCTGCTCCCCAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCCAGAGCCAGGACTTTCTCCCTTACCATGGGATTGCTGCTCCCCAG  800

seq1  TGGGCTCAGTCCCCAAGGCTGCCAGGAGTGCTTAGGAAAGACCCAGTGCA  850
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  TGGGCTCAGTCCCCAAGGCTGCCAGGAGTGCTTATGAAAGACCCAGTGCA  850

seq1  AGCCCGTTGGCTGAGAGCAGGATGGCAAAGAAGAGCCCTGAATTCTCTGC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCGTTGGCTGAGAGCAGGATGGCAAAGAAGAGCCCTGAATTCTCTGC  900

seq1  TGGCTCTTAGCATATTCCTCATGTTCCTTCTGGCCCTCTTCTCCAGATCC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTCTTAGCATATTCCTCATGTTCCTTCTGGCCCTCTTCTCCAGATCC  950

seq1  TACTCCCACTCCAAGTCAGCCCTCTCCACACACAAGGTATAAATATAAAA  1000
      |||||||||||  |||||||||||  ||||| ||| |||||||||| |||
seq2  TACTCCCACTC--AGTCAGCCCTCCTCACACCCAA-GTATAAATAT-AAA  996

seq1  AATAAATAAACACAGAGCCAGCCCTAGAACTGAAGCAAATTGCTGGCAAG  1050
      ||||||| ||||| ||||||||| ||| |||||||| |||||||||| ||
seq2  AATAAAT-AACAC-GAGCCAGCCTTAG-ACTGAAGC-AATTGCTGGC-AG  1041

seq1  CGCTGGCCGCTGATTAACATGCATAGTGGACGTGCAACTGGGC-ATATCG  1099
      |||| |||||||| |||| |||||||| ||||||||||||||| ||||||
seq2  CGCTTGCCGCTGA-TAAC-TGCATAGT-GACGTGCAACTGGGCTATATCG  1088

seq1  GAGAGAAGTGCGTTTTCCCTCCGGAGAAACTATCAGCGTGGCCCCGGCC  1148
       | | |  |||||||||||| |||| |||||||| |||||| |||||||
seq2  AAAATA--TGCGTTTTCCCT-CGGA-AAACTATC-GCGTGG-CCCGGCC  1131