BAC Information

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BAC

Clone NameB6Ng01-042D12
ChromosomeX (Build37)
Map Location 67,649,196 - 67,650,190
singlet/doubletsinglet
Overlap genenone
Upstream geneAff2, EG666577, 1700020N15Rik, Ids, 1110012L19Rik, 4930567H17Rik
Downstream geneLOC100040304, LOC628002, LOC628012, BC023829, EG547447, LOC666981, LOC100040409, LOC628053, LOC100040432, EG280121, LOC666993, Ppia-psx_466.1, EG628080, G630014P10Rik, LOC667013, Mtm1, Mtmr1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-042D12.bB6Ng01-042D12.g
ACCDH868657DH868658
length1,133988
definitionDH868657|Mus musculus domesticus DNA, BAC clone: B6Ng01-042D12, 5' end.DH868658|Mus musculus domesticus DNA, BAC clone: B6Ng01-042D12, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagctctgagccccatattttaattgggttatttgatg
ttctggactccaccttcttgagttctttatatatattggatattagtccc
ctatccgatttgagataggtaaagatcctttctcaatctgttggtggcct
ttttgtcttattgacggtgtcttttgctttgcagaagctttgcaatttta
tgaggtcccatttgtcgattcttgatcttacagcacaagccattgctgtt
ctattcaggaatttttcccctgtacccatatcttcgaggcttttccctac
tttctcctctataagtttcagtgtctctggttttatgtggagttccttaa
tgcacttagatttgaccttagtacaaggagatagaaatggatcaattcgc
attctacataataaccgccagttgtgccagcaccatttgttgaaaatgct
gtctttttcccactggatggttttagctcccttgtcaaagatcaagtgac
cataggtgtgtgggttcatctctgggtctccaattctgttccattggtct
acttgtctgtcactataccagtaccatgcagttttgatcacaattgctct
gtagtacagttttaggtccggcatggtgattccaccagaggttcttttat
ccttgagaagagtttttgctatcctcggttttttgttattccagatgaat
ctgccgattgccctttctaattcgttgaagaattgagttggaattttgat
ggggattgcattgaatctgtagattgctttttggcaagatagccattttt
acaatgttgatcctgccaatccatgagcatgggagatctttccatcttct
gagatcttctttaatttctttctttagagacttgaagttcttatcataca
gatcttcacttccttagttagagtcacgccaggtattttatattttttgt
gactatttgagaagggtggtgtttcccctatttctttcctcagccttttt
atcctttgtatacagaaaggccatggatggtgtgaattaattttatccca
gctactttcatgaagctggttaatcagccctaaggagttcctctggggga
attttagagtcacacttaataatatcctcactt
gaattcccagccgagggactgtcataggctagctgctgctgaaggggtag
tctgaagtagatcaccaagtgtgacaggagaaggatgggaaaggcaggcc
taggacagcacaagaattatgtacttattattacccatggcaagtcctga
gctatggttagaatagtcctccaagtgtgtaataagtttacatgggtata
ggttgtggtaggcaaacaccaacagggctcactctattatacaaaactgc
tcccctgaccaggaaccagtaattgccaacagttcagcagagagcagtag
agcagtgttctgagtagttttatctcaacttggcaaagtcttagaggagg
gaactactagtgagaaatgcctccataggaccctgatgcaggcaatgctc
atatggcatttgtatgactggtgaatgatgggggagggccaatccattgt
aggtggagctttatctggcttggcagtcctgggttacagaggaaagagtg
ggcataggaactatcattaaacaaatgcggttatccacctgatagtagtg
aggctggaactgtttccaaggaaggtaactgcaaggggctagagagcagg
gaactggggggctggagggagggtagcaggaaggacctcagggaagagag
gagtgacgtaattctattcaaagtgaaaacattattaaaaagaaaaataa
actctatctctaaaacaaaagagatgttgctgtgttagtaagggacaaag
tttgtatttaggaaatctaagaaatctaagccacctccagggacatcgtt
ccagtgggctctgtttcatttcttgccttgtaagtgcagggtcttaaaag
gaaatgcatgcatacagtctcccaccacacattggttcagtctagagcac
tgggctgtgtcagcttggctgtccatgtgaatcagctctccagccccaga
tctaagtcttaatgaaggctcagaattatgtaaagttc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_67649196_67650190
seq2: B6Ng01-042D12.g_68_1055 (reverse)

seq1  GAACTTTTACATACTTCTGAGCCTTCATTTAAGAACTTTGATCTGGGGCT  50
      |||| |||||||| ||||||||||||| ||||| |||| |||||||||||
seq2  GAAC-TTTACATAATTCTGAGCCTTCA-TTAAG-ACTTAGATCTGGGGCT  47

seq1  GGTGAGCTGACTCAGCATGGACAGCCAAGCTTGACACAGCCCTGTGCTCT  100
      || ||||||| ||| ||||||||||||||| ||||||||||| |||||||
seq2  GGAGAGCTGATTCA-CATGGACAGCCAAGC-TGACACAGCCCAGTGCTCT  95

seq1  AGACTGAACCAATGTGGTGGTGGGAAGACTGTATGCATGCATTTCCTTTT  150
      ||||||||||||||| |||||||| |||||||||||||||||||||||||
seq2  AGACTGAACCAATGT-GTGGTGGG-AGACTGTATGCATGCATTTCCTTTT  143

seq1  AAGACCCTGCACTTACAAGGCAAGAAATGAAACAGAGCCCACTGGAACGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACCCTGCACTTACAAGGCAAGAAATGAAACAGAGCCCACTGGAACGA  193

seq1  TGTCCCTGGAGGTGGCTTAGATTTCTTAGATTTCCTAAATACAAACTTTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCCTGGAGGTGGCTTAGATTTCTTAGATTTCCTAAATACAAACTTTG  243

seq1  TCCCTTACTAACACAGCAACATCTCTTTTGTTTTAGAGATAGAGTTTATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTTACTAACACAGCAACATCTCTTTTGTTTTAGAGATAGAGTTTATT  293

seq1  TTTCTTTTTAATAATGTTTTCACTTTGAATAGAATTACGTCACTCCTCTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTTTTAATAATGTTTTCACTTTGAATAGAATTACGTCACTCCTCTC  343

seq1  TTCCCTGAGGTCCTTCCTGCTACCCTCCCTCCAGCCCCCCAGTTCCCTGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCTGAGGTCCTTCCTGCTACCCTCCCTCCAGCCCCCCAGTTCCCTGC  393

seq1  TCTCTAGCCCCTTGCAGTTACCTTCCTTGGAAACAGTTCCAGCCTCACTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTAGCCCCTTGCAGTTACCTTCCTTGGAAACAGTTCCAGCCTCACTA  443

seq1  CTATCAGGTGGATAACCGCATTTGTTTAATGATAGTTCCTATGCCCACTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCAGGTGGATAACCGCATTTGTTTAATGATAGTTCCTATGCCCACTC  493

seq1  TTTCCTCTGTAACCCAGGACTGCCAAGCCAGATAAAGCTCCACCTACAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCTCTGTAACCCAGGACTGCCAAGCCAGATAAAGCTCCACCTACAAT  543

seq1  GGATTGGCCCTCCCCCATCATTCACCAGTCATACAAATGCCATATGAGCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTGGCCCTCCCCCATCATTCACCAGTCATACAAATGCCATATGAGCA  593

seq1  TTGCCTGCATCAGGGTCCTATGGAGGCATTTCTCACTAGTAGTTCCCTCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCTGCATCAGGGTCCTATGGAGGCATTTCTCACTAGTAGTTCCCTCC  643

seq1  TCTAAGACTTTGCCAAGTTGAGATAAAACTACTCAGAACACTGCTCTACT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAGACTTTGCCAAGTTGAGATAAAACTACTCAGAACACTGCTCTACT  693

seq1  GCTCTCTGCTGAACTGTTGGCAATTACTGGTTCCTGGTCAGGGGAGCAGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTCTGCTGAACTGTTGGCAATTACTGGTTCCTGGTCAGGGGAGCAGT  743

seq1  TTTGTATAATAGAGTGAGCCCTGTTGGTGTTTGCCTACCACAACCTATAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTATAATAGAGTGAGCCCTGTTGGTGTTTGCCTACCACAACCTATAC  793

seq1  CCATGTAAACTTATTACACACTTGGAGGACTATTCTAACCATAGCTCAGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGTAAACTTATTACACACTTGGAGGACTATTCTAACCATAGCTCAGG  843

seq1  ACTTGCCATGGGTAATAATAAGTACATAATTCTTGTGCTGTCCTAGGCCT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGCCATGGGTAATAATAAGTACATAATTCTTGTGCTGTCCTAGGCCT  893

seq1  GCCTTTCCCATCCTTCTCCTGTCACACTTGGTGATCTACTTCAGACTACC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTTCCCATCCTTCTCCTGTCACACTTGGTGATCTACTTCAGACTACC  943

seq1  CCTTCAGCAGCAGCTAGCCTATGACAGTCCCTCGGCTGGGAATTC  995
      |||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCAGCAGCAGCTAGCCTATGACAGTCCCTCGGCTGGGAATTC  988