BAC Information

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BAC

Clone NameB6Ng01-042I06
ChromosomeX (Build37)
Map Location 88,357,464 - 88,358,647
singlet/doubletsinglet
Overlap genenone
Upstream geneGm370, LOC194615, LOC629471, LOC100041815, Gm44
Downstream geneLOC670074, LOC667972, LOC667976, Mageb2, EG278167, EG667988, EG667993, EG385489, 1700084M14Rik, EG236891, LOC629542, Mageb5, LOC673766, LOC633484, LOC674396, EG278087, Mageb1, EG236892, EG236893
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-042I06.bB6Ng01-042I06.g
ACCDH868870DH868871
length1,1651,027
definitionDH868870|Mus musculus domesticus DNA, BAC clone: B6Ng01-042I06, 5' end.DH868871|Mus musculus domesticus DNA, BAC clone: B6Ng01-042I06, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcatatgtatgatattaatgtacctgctttatattgttatttttct
atccatcaattttattgagtatttaaatttagttggtcattttacttcta
tgatttacctttttttcccactatcttggaaagatcacataaagcagcct
tataagtaattatagaaactttcatctaatcatttttaatttcctccaaa
ggaagttaaagaacatgaactatttttccccaccataattctgttctgtt
aggataaaaaagataaacctattcccaaagtataaaaacagatactataa
gttgtgtcacagtagttgaagcttcattttcagtgccgagtttctgattt
ggaatgcctttacatatccttcagggatgtgagggcagagaaagtaaaaa
caaagggctgactttaaccttttttcaaatttttcatttctgcatgagaa
aattaaattactagattcagactctcggctcatacatagtagtgtatgat
agactttccttcggtagacaaaacagatgtgtctgtgtctattcaccata
aaaaaggaaacttatgatagaccaaagtgatgactgcatggacacctagc
tttttgaactaatgaacttgggtcagaattactaaaaggagcagaggtgc
ctcataattggctgcaccatcagaaagcacacattaacacacattcttca
cataatgtagagatttgtactctggagttctctgcacagcttacaaacaa
gttcagcagtcagtatgagtatcttttctcaatgcaattaggctgatcaa
agttctgcaatgctcagcaattgttttttccctttcacattgctggagag
aggcatttcaaaatttttatcttgacttgtgagctttggtttaccaccta
acactctggaccatctttctctctcccacagagaatgtttaaatttagag
agaaaacacagtgaacttcaaattctcatgcctaccctaagataaattag
ttgcatgtggatttgatggttctactgtttacatttgagcatgtggtcag
agtatttaaatttgtttattctgttcaattttgctgttatttacagcatg
ggaaaatgaatgctggtgtttcacatagaacagatgcgtcatttttttca
aattcctagaagaga

gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatagctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccaacaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagcccaaaacc
taggatacccaagatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaaacacccttggaaggagttacagagacaaagtttggagctgagatga
aaggatggaccatgtagagactgcctatccagggatccaccccataatca
gcatccaaacgctgacaccattgcatacactagcaagattttatcgaaag
gacccagatggtagcttgtctcttgtgaagactatggcgggtgccctagc
aaacacagaagtggatgcccacagtcagctaatgatggatccacagggtc
ccaatgaaggagctaaagaagcacccatggagctaaaggtttggcatcct
attgggggaacacatattaacttacag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_88357464_88358647
seq2: B6Ng01-042I06.b_42_1206 (reverse)

seq1  TCTCTTCTTAGGAAAATTGAAAAAAAATGAAACGCATACTGTTCTATGTT  50
      ||||||| ||||  ||||  |||||||||  |||||| |||||||||| |
seq2  TCTCTTC-TAGG--AATTTGAAAAAAATG--ACGCAT-CTGTTCTATG-T  43

seq1  GAAACAACAGCATTCATGTTTTCCAATGCTGTAAATAACAGCAAATATTG  100
      |||||| |||||||||  |||||| |||||||||||||||||||| ||||
seq2  GAAACACCAGCATTCA--TTTTCCCATGCTGTAAATAACAGCAAA-ATTG  90

seq1  AACAGAATAAACATATTTTAAATACTCTGACCACAATTGCTCAAATGTAA  150
      ||||||||||||| | |||||||||||||||||||  |||||||||||||
seq2  AACAGAATAAACA-AATTTAAATACTCTGACCACA--TGCTCAAATGTAA  137

seq1  ACAGTAAGAAACCATCAAATCCACATGCAACTAATTTTATCTTAGGGTAG  200
      ||||||   ||||||||||||||||||||||||| |||||||||||||||
seq2  ACAGTA--GAACCATCAAATCCACATGCAACTAA-TTTATCTTAGGGTAG  184

seq1  GCATTGAGAATTTGAAGTTCACTGTGTTTTCTTCTTCTAAATTTAAACAT  250
      ||| ||||||||||||||||||||||||||||   |||||||||||||||
seq2  GCA-TGAGAATTTGAAGTTCACTGTGTTTTCT--CTCTAAATTTAAACAT  231

seq1  TCTCTGTGGGAGAGAGAAAGATGGTCCAGAGTGTTAGGTGGTAAACCAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGTGGGAGAGAGAAAGATGGTCCAGAGTGTTAGGTGGTAAACCAAA  281

seq1  GCTCACAAGTCAAGATAAAAATTTTGAAATGCCTCTCTCCAGCAATGTGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCACAAGTCAAGATAAAAATTTTGAAATGCCTCTCTCCAGCAATGTGA  331

seq1  AAGGGAAAAAACAATTGCTGAGCATTGCAGAACTTTGATCAGCCTAATTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGAAAAAACAATTGCTGAGCATTGCAGAACTTTGATCAGCCTAATTG  381

seq1  CATTGAGAAAAGATACTCATACTGACTGCTGAACTTGTTTGTAAGCTGTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGAGAAAAGATACTCATACTGACTGCTGAACTTGTTTGTAAGCTGTG  431

seq1  CAGAGAACTCCAGAGTACAAATCTCTACATTATGTGAAGAATGTGTGTTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGAACTCCAGAGTACAAATCTCTACATTATGTGAAGAATGTGTGTTA  481

seq1  ATGTGTGCTTTCTGATGGTGCAGCCAATTATGAGGCACCTCTGCTCCTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGTGCTTTCTGATGGTGCAGCCAATTATGAGGCACCTCTGCTCCTTT  531

seq1  TAGTAATTCTGACCCAAGTTCATTAGTTCAAAAAGCTAGGTGTCCATGCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTAATTCTGACCCAAGTTCATTAGTTCAAAAAGCTAGGTGTCCATGCA  581

seq1  GTCATCACTTTGGTCTATCATAAGTTTCCTTTTTTATGGTGAATAGACAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATCACTTTGGTCTATCATAAGTTTCCTTTTTTATGGTGAATAGACAC  631

seq1  AGACACATCTGTTTTGTCTACCGAAGGAAAGTCTATCATACACTACTATG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACACATCTGTTTTGTCTACCGAAGGAAAGTCTATCATACACTACTATG  681

seq1  TATGAGCCGAGAGTCTGAATCTAGTAATTTAATTTTCTCATGCAGAAATG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGAGCCGAGAGTCTGAATCTAGTAATTTAATTTTCTCATGCAGAAATG  731

seq1  AAAAATTTGAAAAAAGGTTAAAGTCAGCCCTTTGTTTTTACTTTCTCTGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATTTGAAAAAAGGTTAAAGTCAGCCCTTTGTTTTTACTTTCTCTGC  781

seq1  CCTCACATCCCTGAAGGATATGTAAAGGCATTCCAAATCAGAAACTCGGC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCACATCCCTGAAGGATATGTAAAGGCATTCCAAATCAGAAACTCGGC  831

seq1  ACTGAAAATGAAGCTTCAACTACTGTGACACAACTTATAGTATCTGTTTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGAAAATGAAGCTTCAACTACTGTGACACAACTTATAGTATCTGTTTT  881

seq1  TATACTTTGGGAATAGGTTTATCTTTTTTATCCTAACAGAACAGAATTAT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACTTTGGGAATAGGTTTATCTTTTTTATCCTAACAGAACAGAATTAT  931

seq1  GGTGGGGAAAAATAGTTCATGTTCTTTAACTTCCTTTGGAGGAAATTAAA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGGGAAAAATAGTTCATGTTCTTTAACTTCCTTTGGAGGAAATTAAA  981

seq1  AATGATTAGATGAAAGTTTCTATAATTACTTATAAGGCTGCTTTATGTGA  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGATTAGATGAAAGTTTCTATAATTACTTATAAGGCTGCTTTATGTGA  1031

seq1  TCTTTCCAAGATAGTGGGAAAAAAAGGTAAATCATAGAAGTAAAATGACC  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCCAAGATAGTGGGAAAAAAAGGTAAATCATAGAAGTAAAATGACC  1081

seq1  AACTAAATTTAAATACTCAATAAAATTGATGGATAGAAAAATAACAATAT  1150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTAAATTTAAATACTCAATAAAATTGATGGATAGAAAAATAACAATAT  1131

seq1  AAAGCAGGTACATTAATATCATACATATGAATTC  1184
      ||||||||||||||||||||||||||||||||||
seq2  AAAGCAGGTACATTAATATCATACATATGAATTC  1165


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