BAC Information

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BAC

Clone NameB6Ng01-042K22
ChromosomeX (Build37)4 (Build37)
Map Location 68,031,471 - 68,032,01733,051,763 - 33,052,266
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneAff2, 1700020N15Rik, Ids, 1110012L19Rik, 4930567H17Rik, LOC100040304, LOC628002, LOC628012, BC023829, EG547447, LOC666981, LOC100040409, LOC628053, LOC100040432, EG280121, LOC666993
Downstream genePpia-psx_466.1, EG628080, G630014P10Rik, LOC667013, Mtm1, Mtmr1, Cd99l2, LOC667017, Hmgb3, LOC100040549, Gpr50
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-042K22.bB6Ng01-042K22.g
ACCDH868981DH868982
length950926
definitionDH868981|Mus musculus domesticus DNA, BAC clone: B6Ng01-042K22, 5' end.DH868982|Mus musculus domesticus DNA, BAC clone: B6Ng01-042K22, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(68,031,471 - 68,032,017)(33,051,763 - 33,052,266)
sequence
gaattccctttatgtctacactctctcctgcagggcctttactgagctat
tccagtgaggtacacggatctgaaatgtaaggacactaaaatttatgggg
ccttttagtggttcccagaggccaggtgtgggagaagccctccactgcca
tgcaaaagaaaggagaaaccagtttaacaagttagtactacaaaatgaag
gcggagaaaataaagaagagcagctcaaaacattttgataagaggcatat
ttcaatggtgaaacccatagattttgaaattggaattctggctctactcg
cagcttattagccatcaatctggtgaaatgctacattacttcaaggtctc
ttccttatatcaaaaaacaaacataattatgtatccacctggagggttat
gaaaggactgagtttattttctcggttgatgtctgctgctaatatttcta
ctaggaccagccgggctagaagcaaggggtatttgtaagtaaggtaggcg
ataaaataagattctgggactcaggtggcaggaagtgcttccccagactg
atctgtctggggtggtgaagtaaagaacttggagtagaacctacagtcac
tatttaactaaaccagcataatctctaagtgcattctaagtcctcatagt
ctatagcagtctcaacaatgttaaaagcccaaagttcaaagtcttttctg
agactcaatcacttaactgtaatgccctataaagtcaaaataaaaaacag
gacacatactatggtggttttaatatgcttggcccagggaatggcattaa
ttaggaggtgtgatcttgtttgaggaagtgtgtcactgtggggtgggctt
tgggaccctgctcctagctgcctgagtacagttggttcctgttttccttt
ggatgaagatgtagaactctcaacatctcctacaccatgcctgcctcaaa

gaattctttgtttagctgtgagccccatttttaaaggggttatttgattt
tcgggagtccaacttcatgagttctttatatatatattggatattagtcc
cctatctgatttaggataggtaaagatcctttcccaatctgttggtggcc
tttttgtcttttttttttttttacaggttcagctctttattggccaactt
aacaaaagcagtttagtcaaaaagaccaaagaacttgccatcttcagact
tctcggactcttcattccttgcctccactttcttctcctcagctggggtg
gcagcagtagacggagcagcaccaccagcaggcacagctccagctgctgg
agtaggcccaccagcccctacattgcagatgaggatcccaatgttgacat
tggccagagccttggcaaacaagccaggccagaaaggttcaatgctgaca
ccagctgctttagtgagggcattgatcttatcctccatgaccgtcacctc
atcatcgtgcaggatgagggcagagtagatgcaggagagttcagagatgg
aagccatgctgtagactgccagcacggtgctagtcactggatgaagtgag
ggcctcaccccaacgctgccttagcttcctcagaaggacggagcaccttg
gctgcagatgaagaaaagaaccctttttgtcttattgacagtgtcttttg
ccttgaagaagctttgcaattttatgaggtcccatttgtcaattctcgat
cttacagcacaagccattgatgtcctattcaggaatttgtcccctgtgcc
catatcttcgaggcttttccccactttctcctctataagtttcagtgttt
ctggtttatgtggagttccttgatccacttagatttgaccttagtacaga
gataggaatggatcaattcgcattct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_68031471_68032017
seq2: B6Ng01-042K22.b_42_588 (reverse)

seq1  TCTGGGGAAGCACTTCCTGCCACCTGAGTCCCAGAATCTTATTTTATCGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGGGAAGCACTTCCTGCCACCTGAGTCCCAGAATCTTATTTTATCGC  50

seq1  CTACCTTACTTACAAATACCCCTTGCTTCTAGCCCGGCTGGTCCTAGTAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACCTTACTTACAAATACCCCTTGCTTCTAGCCCGGCTGGTCCTAGTAG  100

seq1  AAATATTAGCAGCAGACATCAACCGAGAAAATAAACTCAGTCCTTTCATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATTAGCAGCAGACATCAACCGAGAAAATAAACTCAGTCCTTTCATA  150

seq1  ACCCTCCAGGTGGATACATAATTATGTTTGTTTTTTGATATAAGGAAGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTCCAGGTGGATACATAATTATGTTTGTTTTTTGATATAAGGAAGAG  200

seq1  ACCTTGAAGTAATGTAGCATTTCACCAGATTGATGGCTAATAAGCTGCGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTGAAGTAATGTAGCATTTCACCAGATTGATGGCTAATAAGCTGCGA  250

seq1  GTAGAGCCAGAATTCCAATTTCAAAATCTATGGGTTTCACCATTGAAATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGAGCCAGAATTCCAATTTCAAAATCTATGGGTTTCACCATTGAAATA  300

seq1  TGCCTCTTATCAAAATGTTTTGAGCTGCTCTTCTTTATTTTCTCCGCCTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTCTTATCAAAATGTTTTGAGCTGCTCTTCTTTATTTTCTCCGCCTT  350

seq1  CATTTTGTAGTACTAACTTGTTAAACTGGTTTCTCCTTTCTTTTGCATGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTGTAGTACTAACTTGTTAAACTGGTTTCTCCTTTCTTTTGCATGG  400

seq1  CAGTGGAGGGCTTCTCCCACACCTGGCCTCTGGGAACCACTAAAAGGCCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGGAGGGCTTCTCCCACACCTGGCCTCTGGGAACCACTAAAAGGCCC  450

seq1  CATAAATTTTAGTGTCCTTACATTTCAGATCCGTGTACCTCACTGGAATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAAATTTTAGTGTCCTTACATTTCAGATCCGTGTACCTCACTGGAATA  500

seq1  GCTCAGTAAAGGCCCTGCAGGAGAGAGTGTAGACATAAAGGGAATTC  547
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCAGTAAAGGCCCTGCAGGAGAGAGTGTAGACATAAAGGGAATTC  547

seq1: chr4_33051763_33052266
seq2: B6Ng01-042K22.g_219_725 (reverse)

seq1  CTGCCGCCAAGGTGCTCGGTCCTTCCGAGGGAGCTAAGGCCGCGTTGGGG  50
      |||| |||||||||||| ||||||| |||| ||||||||| |||||||||
seq2  CTGCAGCCAAGGTGCTCCGTCCTTCTGAGGAAGCTAAGGCAGCGTTGGGG  50

seq1  TGAGGCCCTCACTTCATCCGGCGACTAGCACCGTGCCGGCAGTCTACAGC  100
      ||||||||||||||||||| | |||||||||||||| |||||||||||||
seq2  TGAGGCCCTCACTTCATCCAGTGACTAGCACCGTGCTGGCAGTCTACAGC  100

seq1  ATGGCTTCCATCTCCGAGCTCGCTTGCATCTACTCCGCCCTCATCCTGCA  150
      |||||||||||||| || ||| | ||||||||||| ||||||||||||||
seq2  ATGGCTTCCATCTCTGAACTCTCCTGCATCTACTCTGCCCTCATCCTGCA  150

seq1  CGACGATGAGGTGACGGTCACGGAGGATAAGATCAATGCCCTCATTAAAG  200
      ||| |||||||||||||||| ||||||||||||||||||||||| |||||
seq2  CGATGATGAGGTGACGGTCATGGAGGATAAGATCAATGCCCTCACTAAAG  200

seq1  CAGCTGGTGTCAGCGTCGAACCTTTCTGGCCTGGCTTGTTTGCCAAGGCT  250
      |||||||||||||| | |||||||||||||||||||||||||||||||||
seq2  CAGCTGGTGTCAGCATTGAACCTTTCTGGCCTGGCTTGTTTGCCAAGGCT  250

seq1  CTGGCCAATGTCAACATTGGGTGCCTCATCTGCAATGTAGGGGCTGGTGG  300
      |||||||||||||||||||||  |||||||||||||||||||||||||||
seq2  CTGGCCAATGTCAACATTGGGATCCTCATCTGCAATGTAGGGGCTGGTGG  300

seq1  GCCCGCTCCAACAGCTGGAGCTGCGCCTGCTGGTGGTGCTGCTCTGTCCA  350
      |||  ||||| |||||||||||| |||||||||||||||||||| ||| |
seq2  GCCTACTCCAGCAGCTGGAGCTGTGCCTGCTGGTGGTGCTGCTCCGTCTA  350

seq1  CTGCTGCTGCCCCAGCTGAGGAGAAGAAAGTGGAGGCAAAGAAGGAAGAG  400
      |||||||  |||||||||||||||||||||||||||||| ||| ||||||
seq2  CTGCTGCCACCCCAGCTGAGGAGAAGAAAGTGGAGGCAAGGAATGAAGAG  400

seq1  TCCGAGGAGTCTGAAGATGACATGGGCTTTGGTCTTTTTGACTAAACTGC  450
      |||||| |||||||||||| || |  ||||||||||||||||||||||||
seq2  TCCGAGAAGTCTGAAGATGGCAAGTTCTTTGGTCTTTTTGACTAAACTGC  450

seq1  TTTTGTTAAGTTGGCCAATAAAGAGCTGAACCTGTAAAAAAAAAAAAAA-  499
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  TTTTGTTAAGTTGGCCAATAAAGAGCTGAACCTGTAAAAAAAAAAAAAAG  500

seq1  --AAAAA  504
        |||||
seq2  ACAAAAA  507