MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-044B04
Chromosome	X (Build37)
Map Location	23,667,220 - 23,668,157
singlet/doublet	singlet
Overlap gene	none
Upstream gene	Klhl13, EG635719, Wdr44, EG236749, EG214450, EG245376
Downstream gene	LOC546271, LOC100043957, LOC100043206, LOC669000, LOC629204, EG546272, LOC100043216, EG546282, LOC100040417, LOC100040428, LOC100040433
Link	Open Mouse BAC browser

Click to get alignment info.

name	Klhl13 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67455 MGI:1914705
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG635719 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:635719 MGI:3646195
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins pseudo : _no_value

name	Wdr44 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:72404 MGI:1919654
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG236749 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:236749 MGI:3648288
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG214450 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:214450 MGI:3648623
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 Proteins pseudo : _no_value

name	EG245376 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:245376 MGI:3648554
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC546271 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:546271
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 44 ESTs

name	LOC100043957 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043957
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins

name	LOC100043206 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043206
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs

name	LOC669000 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:669000
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins pseudo : _no_value

name	LOC629204 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:629204
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 5 ESTs, 5 Proteins pseudo : _no_value

name	EG546272 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:546272 MGI:3643862
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 mRNAs, 11 ESTs, 5 Proteins

name	LOC100043216 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043216
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 mRNAs, 7 ESTs, 5 Proteins

name	EG546282 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:546282 MGI:3646322
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100040417 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040417
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 11 ESTs, 5 Proteins pseudo : _no_value

name	LOC100040428 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040428
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 66 ESTs

name	LOC100040433 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040433
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 12 ESTs, 2 Proteins pseudo : _no_value

name	Klhl13 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802641 GeneID:67455 MGI:1914705
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : kelch-like 13 (Drosophila) transcript_id : NM_026167.2

name	Wdr44 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124249072 GeneID:72404 MGI:1919654
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : WD repeat domain 44 transcript_id : NM_175180.2

name	EG236749 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142362382 GeneID:236749 MGI:3648288
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : predicted gene, EG236749 transcript_id : NM_001034864.2

name	EG245376 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:126157496 GeneID:245376 MGI:3648554
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : predicted gene, EG245376 transcript_id : NM_001081666.1

name	LOC546271 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149271011 GeneID:546271
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 44 ESTs product : similar to LOC635138 protein transcript_id : XM_001478408.1

name	LOC100043957 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149271064 GeneID:100043957
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins product : similar to XMR transcript_id : XM_001481261.1

name	LOC100043206 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149271013 GeneID:100043206
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs product : hypothetical protein LOC100043206 transcript_id : XM_001478415.1

name	EG546272 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94406980 GeneID:546272 MGI:3643862
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 11 ESTs, 5 Proteins product : predicted gene, EG546272, transcript variant 2 transcript_id : XM_620960.3

name	EG546272 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149271016 GeneID:546272 MGI:3643862
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 9 ESTs, 5 Proteins product : predicted gene, EG546272, transcript variant 1 transcript_id : XM_001478430.1

name	LOC100043216 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149271020 GeneID:100043216
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 6 ESTs, 5 Proteins product : hypothetical protein LOC100043216, transcript variant 2 transcript_id : XM_001478456.1

name	LOC100043216 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149271018 GeneID:100043216
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 6 ESTs, 5 Proteins product : hypothetical protein LOC100043216, transcript variant 1 transcript_id : XM_001478447.1

name	EG546282 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:126090645 GeneID:546282 MGI:3646322
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : predicted gene, EG546282 transcript_id : NM_001081657.1

name	LOC100040428 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149271221 GeneID:100040428
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 66 ESTs product : hypothetical protein LOC100040428 transcript_id : XM_001474898.1

name	Klhl13 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13385674 GeneID:67455 MGI:1914705
definition	GO_function : GO:0005515 - protein binding [Evidence IEA] codon_start : 1 note : BTB and kelch domain containing 2 product : kelch-like 13 protein_id : NP_080443.1

name	Wdr44 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124249073 GeneID:72404 MGI:1919654
definition	codon_start : 1 product : WD repeat domain 44 protein_id : NP_780389.2

name	EG236749 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:85702205 GeneID:236749 MGI:3648288
definition	codon_start : 1 exception : mismatches in translation note : novel protein similar to testis derived transcript (Tes) product : similar to hypothetical protein protein_id : NP_001030036.1

name	EG245376 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:126157497 GeneID:245376 MGI:3648554
definition	GO_function : GO:0008270 - zinc ion binding [Evidence IEA] codon_start : 1 product : hypothetical protein LOC245376 protein_id : NP_001075135.1

name	LOC546271 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149271012 GeneID:546271
definition	codon_start : 1 product : similar to LOC635138 protein protein_id : XP_001478458.1

name	LOC100043957 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149271065 GeneID:100043957
definition	codon_start : 1 product : similar to XMR protein_id : XP_001481311.1

name	LOC100043206 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149271014 GeneID:100043206
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001478465.1

name	EG546272 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149271017 GeneID:546272 MGI:3643862
definition	codon_start : 1 product : similar to XMR isoform 1 protein_id : XP_001478480.1

name	EG546272 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:83000007 GeneID:546272 MGI:3643862
definition	codon_start : 1 product : similar to XMR isoform 2 protein_id : XP_620960.2

name	LOC100043216 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149271019 GeneID:100043216
definition	codon_start : 1 product : hypothetical protein isoform 1 protein_id : XP_001478497.1

name	LOC100043216 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149271021 GeneID:100043216
definition	codon_start : 1 product : hypothetical protein isoform 2 protein_id : XP_001478506.1

name	EG546282 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:126090646 GeneID:546282 MGI:3646322
definition	codon_start : 1 note : novel protein similar to Xlr-related, meiosis regulated (Xmr) product : hypothetical protein LOC546282 protein_id : NP_001075126.1

name	LOC100040428 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149271222 GeneID:100040428
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001474948.1

name	EG635719 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:635719
definition	number : 1 pseudo : _no_value

name	EG214450 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:214450
definition	number : 1 pseudo : _no_value

name	LOC669000 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:669000
definition	number : 1 pseudo : _no_value

name	LOC669000 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:669000
definition	number : 2 pseudo : _no_value

name	LOC669000 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:669000
definition	number : 3 pseudo : _no_value

name	LOC669000 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:669000
definition	number : 4 pseudo : _no_value

name	LOC669000 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:669000
definition	number : 5 pseudo : _no_value

name	LOC669000 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:669000
definition	number : 6 pseudo : _no_value

name	LOC669000 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:669000
definition	number : 7 pseudo : _no_value

name	LOC669000 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:669000
definition	number : 8 pseudo : _no_value

name	LOC629204 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149271015 GeneID:629204
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 5 ESTs, 5 Proteins product : hypothetical LOC629204 pseudo : _no_value transcript_id : XR_035701.1

name	LOC100040417 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149271220 GeneID:100040417
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 11 ESTs, 5 Proteins product : similar to XMR pseudo : _no_value transcript_id : XR_031969.1

name	LOC100040433 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149271223 GeneID:100040433
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 12 ESTs, 2 Proteins product : similar to Xlr-like pseudo : _no_value transcript_id : XR_031984.1

clone name	MSMg01-187I19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-532M19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-232K16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-390I01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-170P08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-318H15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-174M04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-348B23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-309M22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-070P24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-074M23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-478I16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-352I09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-079G17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-547M10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-335L15
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-536M02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-142N05
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-167D20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-053P14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-053L03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-139N23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-548G17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-352C24
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-385A01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-177M12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-411B03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-304I16
singlet/doublet	singlet
plural/unique	plural

clone name	B6Ng01-067L22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-031B11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-111K09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-070A12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-009L23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-222E23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-305H23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-160L09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-181B11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-335C19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-117B11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-040J05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-006M18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-160D16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-327O10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-193B22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-263I03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-014I03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-194J12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-123N01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-332G13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-329A09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-310H07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-048G01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-005M01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-234M13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-241N04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-129J11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-181I03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-175C09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-307H18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-028A21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-110P19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-293E10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-339K11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-182B06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-044B04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-221E01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-297N03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-118K01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-086N23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-013G04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-084A24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-316J06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-259B03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-306K11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-031D01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-329D15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-099I23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-232P15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-291H09
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-044B04.b	B6Ng01-044B04.g
ACC	DH869934	DH869935
length	1,139	1,246
definition	DH869934\|Mus musculus domesticus DNA, BAC clone: B6Ng01-044B04, 5' end.	DH869935\|Mus musculus domesticus DNA, BAC clone: B6Ng01-044B04, 3' end.
singlet/doublet	singlet	---
BLAST hit	unique	no hit data
sequence	gaattcacagtgacaatcgccgagcgaagctcattcatcttgccatcaaa atttgcagtctaatttcttaacaggaatttcttaacaggatcagcttctt cattttgacagcgtcgcactagccgctctggaacccacactggctctgcg taattctgtggaaacatgcaaacagaccctcttgcccaggccaacacggg atccggaccatttcatgatcctgtaagcacatccttccatttagcatacc ccagtttactggggctggtattagtatgtcattcagcagcaaagcaacat tccttatccaattgtaaaaaattttaagataaagagagctaaggagagtc ttatctttggggtatgatcatagcctatttccccattttgttttattaat aattcttttaaggttctatgtgctcatttaatgattctttggccttgagg attatatggcaggccgtgtttaacttgtacttccatctgttgacaaaaag acaccatggttttggcagtatatgcagggccattatctcttttaagttgt tggggtttacctcaagctgtctaggtctccaaacaatgttgtataacatg ggaggccttttctcctgccatgggagatgcataaactatttctgaacatg tatcaatggatacatgaacatatttcaatctgccaaaatttgaaaaatgt gtcacatccatctgccacacctgtagaggaagcaatcctctaggattcgc tctataagaaggcgggtgttgaaactcaaggcaaagtccacaggtagtga ctacatcccgagcttgtgccctagagattccaaattttctctgcagagtt ttagcattaacatgaaatttagaatgaaattgtgaggctaactccatagg ggatgctaaaaatatgaactccatacgagtacaattatccacatatcatt tcccctacctaaggtcctggaagcctactatgggcatgaacatgtccatt atataatggttggcgtctttcccacagcaacttctgtaattgtaaggcca ggctggatggtactacgaacttttattggccagccacttctagggataac taaatactacaattgtgatctgaaattgattaaaggaaa	gaattccttggcccaggaaaagacattctgaacagcatactgataacaaa ggcactaagaccagcaattaataaatggaagctcacagcagtagaacagt gactaagaaaatatatgtatgtgaaagaaatataaatggaatcatcaaat aatgagggagacaatgccacaagtagacatctcatggcaccaagtgaaac ctctcacatcagcaccaggaatgggttatatctagttgagtcactggcca aaacggtcccatggaaacctccaaacatctcaggttgttgccaagactat tggttggtctctacaaacagggggtaaggccctattgccaaagacattta cttaagtcactgaacattgaaaggtagaggttatgactaagtgggagctt ccccctactgattggcattcatggcactggaaggtactctgtatgttatc caagaaaggtagtcatcaactcagctacaaaccctatgatgtacatagtg acatgcctgcaagagacgctggggaaatagtggctcaaaactgggttggg gcagggtaacccactcgctgattggatttaagcctactctgtgagatgga aactgttcctgacatggttgggtggtcaagaccttgagacatgacaggcc atggacctagggaaaaccaaataatgttgttctcccaaaggaacatagca ataaaatgactcctagccacactctgctatacctgtaggtcagcgctcca cacagctatcatcagagaagcttcctcttgtagtagtagatggaaactga caaagagacccacagctggataatttgcagagattgggagagtttttgga acactcatttctaaatgggatgtattcatcaaacccctctcttcagggtt tagggaactatgtgaagaagctgagaggctgcaagggctagtgtggcaag cagacacaaataaacaaagccttctagacacagaccaaaccatatatgaa ttctcagagaaagaggtagtatgcgcagagcctgttacaggtttagactg atgggaccagcaggaagacaagggaagtaaacacagactccaacccctcc ccaagagctatctgcattgaacccactgacaaaggaaaattcaatttttc agtgagtgcattgaatatcactatcccatgagtctcgagactggctacaa gcccaggacacagaatgtcgggagttttccacgtttacttatgcag
quality values	Open. Hide. 61 41 50 52 61 36 31 55 36 55 55 61 47 61 32 61 61 61 47 55 61 55 61 61 55 52 52 59 43 52 59 34 28 41 52 59 59 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 59 61 59 50 59 61 61 61 61 61 61 61 61 61 61 61 59 61 61 59 61 61 61 59 61 59 55 61 61 61 61 61 61 61 61 61 61 59 61 59 61 61 61 61 61 59 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 59 61 61 61 61 61 61 61 59 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 50 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 39 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 53 57 47 37 47 43 42 34 57 53 57 57 57 57 53 53 57 53 53 43 53 38 57 57 57 57 53 52 47 30 53 53 52 53 53 57 57 53 53 53 53 57 57 57 47 52 57 53 53 52 53 57 50 52 53 53 47 53 52 57 57 53 43 50 53 50 57 57 57 57 53 50 53 53 47 57 57 52 45 57 53 53 53 41 37 43 30 57 57 36 38 57 46 52 52 47 33 33 39 27 31 27 37 37 50 50 53 40 53 53 38 31 53 53 53 50 42 53 38 52 50 50 57 45 57 42 52 40 53 32 42 50 53 36 45 28 50 50 53 53 53 53 40 38 33 53 34 19 53 50 25 35 57 52 52 50 37 50 57 35 52 39 28 52 21 53 57 39 42 48 25 53 39 53 57 57 43 57 28 23 45 36 57 26 53 57 57 33 37 40 37 31 33 37 22 52 36 52 34 40 47 31 33 40 36 44 30 48 39 57 53 16 53 32 41 33 37 44 28 28 20 57 53 33 40 22 53 28 29 12 35 35 40 30 51 33 29 46 51 40 38 29 32 34 32 25 22 20 47 22 32 51 51 25 31 23 38 18 9 34 29 31 34 16 17 21 29 51 29 23 51 39 35 13 38 29 25 34 28 51 29 23 48 29 13 23 48 28 29 15 39 30 28 32 35 29 30 19 29 29 19 46 46 24 9 9 19 29 28 29 51 46 51 31 29 20 22 20 29 33 29 33 28 28 18 29 34 28 13 46 22 27 19 29 23 23 29 27 27 28 33 18 20 11 36 17 22 26 30 20 30 51 27 33 46 36 33 17 25 23 25 28 23 18 31 33 12 27 34 25 27 27 20 29 19 30 27 25 26 31 20 19 19 29 51 28 14 23 27 26 34 20 22 14 14 20 12 18 22 31 5 5 8 7 11 20 16 32 20 38 29 16 15 28 18 18 19 6 10 11 44 10 8 33 17 8 14 14 23 33 17 13 18 27 31 19 15 21 15 22 12 27 19 31 19 25 18 22 24 14 9 20 10 21 8 29 7 7 7 5 21 26 10 14 8 9 12 29 11 23 23 22 23 34 34 15 17 28 27 7 14 11 31 13 18 29 26 7 10 13 9 22 14 13 17 28 22 15 15 6 11 3 8 11 27 7 25 14 10 5 8 8 4 4 4 8 8 7 6 6 2 4 16 19 21 26 7 7 4 2 7 13 22 17 31 13 11 7 9 32 21	Open. Hide. 61 61 52 49 61 59 43 43 28 36 36 36 43 37 33 30 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 53 61 61 61 61 53 61 61 61 61 61 53 53 53 50 61 53 61 61 61 61 61 61 61 50 53 61 61 61 61 61 61 61 61 61 61 61 61 61 53 61 53 61 53 61 61 61 61 61 61 61 61 61 61 53 61 53 53 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 53 53 47 57 57 53 57 52 53 57 47 53 57 57 57 52 53 57 57 53 30 57 57 57 43 40 57 52 57 57 52 53 57 53 53 57 57 57 57 57 50 57 57 45 53 45 57 53 53 57 57 50 53 57 45 53 57 53 53 57 53 50 52 57 57 53 45 46 47 57 42 32 57 41 25 53 43 57 53 52 38 52 39 57 53 52 45 52 34 33 52 57 52 42 45 38 52 28 47 37 53 57 57 38 36 47 53 50 36 57 53 53 57 57 45 37 50 38 57 45 45 41 53 39 34 16 57 38 24 57 52 50 42 57 47 24 53 47 32 52 36 31 37 27 47 50 30 34 26 37 50 53 57 57 53 30 39 47 42 42 50 53 36 50 27 53 53 35 50 30 53 53 53 47 53 37 36 36 37 33 47 41 35 57 37 40 23 44 29 40 33 27 48 37 40 39 25 53 30 40 40 52 40 40 52 52 32 33 39 37 37 35 35 17 57 24 47 46 18 35 28 47 37 37 40 40 29 45 40 23 41 25 37 41 33 37 44 35 30 21 33 27 29 46 28 29 29 32 30 19 28 47 47 30 46 27 30 28 47 46 30 32 30 30 38 32 47 44 29 30 28 29 25 51 36 27 27 37 18 47 17 29 19 36 47 46 29 48 28 47 24 24 47 51 51 30 43 29 29 29 27 20 34 30 28 22 29 51 29 30 35 28 43 29 29 41 51 28 23 14 25 18 21 14 29 34 14 29 29 29 41 26 27 41 39 26 29 27 29 29 27 28 35 13 30 46 28 18 46 24 28 29 51 29 26 28 27 28 29 29 29 28 25 27 31 12 28 33 12 26 21 14 25 6 24 20 19 10 29 21 16 23 9 26 44 14 26 33 21 15 23 38 23 31 34 16 28 26 29 28 25 9 27 14 16 32 9 38 21 14 11 44 29 21 6 51 32 26 22 20 34 26 29 20 8 8 19 8 18 15 16 6 25 12 21 10 39 16 19 18 9 8 5 5 6 13 34 27 11 15 14 15 12 7 6 7 18 10 14 10 5 5 12 6 32 23 31 16 6 6 15 18 12 5 14 7 5 20 6 16 17 20 7 4 9 11 22 18 21 26 12 20 17 16 5 17 12 29 29 21 20 30 42 23 23 29 13 12 23 16 9 25 16 7 3 4 12 5 4 5 12 26 14 14 6 5 16 15 31 14 5 4 7 7 5 15 14 15 23 24 14 19 9 27 26 14 4 5 7 7 12 5 11 4 20 4 10 10 5 14 13 9 6 5 15 9 8 13 4 3 3 24 13 4 7 5 12 10 8 12 27 6 16 6 7 27 23 18 3 8 5 7 10 9 22 30 25 12 5 4 6 5 14 3 3 3 6 12 7 15 16 5 5 5 7 4 14 7 4 4 2 2 3 2 5 9 3 2 5 6 3 1 4 6 3 2 1 10 3 4 2 11 13 4 8 16 4 1 6 4 4 23 20 4 5 11 6 20 12 4 3 13 4 7 5 12 4 15 4 19 6 9 4 18 8 6 3 1 3 12 4 3 5 20 4 3 3 6 7 4 4 3 4 7 4

Alignment Information

BAC End 1

BAC End 2

seq1: chrX_23667220_23668157
seq2: B6Ng01-044B04.b_43_1181

seq1  GAATTCACAGTGACAATCGCTGAGCAAAGCTCATGCATCTTTCCATCAAA  50
      |||||||||||||||||||| |||| |||||||| |||||| ||||||||
seq2  GAATTCACAGTGACAATCGCCGAGCGAAGCTCATTCATCTTGCCATCAAA  50

seq1  ATTTGCAGTCCAATTTCTTAACAGGAATTTCTTATCAGGAAGCATCATGA  100
      |||||||||| ||||||||||||||||||||||| |||            
seq2  ATTTGCAGTCTAATTTCTTAACAGGAATTTCTTAACAG------------  88

seq1  CAAAGAGGCATCGGCCTGGGAAAAACCGACAGTATCCCCCATCTGGGTTC  150
                                                        
seq2  --------------------------------------------------  88

seq1  TGCATCCATCAGGGACAGACACATGCTCATCACCAGCAAGATCAGCTTCT  200
                                             |||||||||||
seq2  ---------------------------------------GATCAGCTTCT  99

seq1  TCATTTTGACAGCATCTCACTAGCTGCTCCGGAACCCACACTGGCTCTGT  250
      ||||||||||||| || ||||||| |||| ||||||||||||||||||| 
seq2  TCATTTTGACAGCGTCGCACTAGCCGCTCTGGAACCCACACTGGCTCTGC  149

seq1  GCGATTCTGTGGAAACATGCAAACAGACCCTCTCACCCAGGCCAAAGTGG  300
      |  ||||||||||||||||||||||||||||||  ||||||||||   ||
seq2  GTAATTCTGTGGAAACATGCAAACAGACCCTCTTGCCCAGGCCAACACGG  199

seq1  GATCCAGACCATTAAATGATCCTCTAAGCACATCCTTCCATTTAGCATAC  350
      ||||| |||||||  |||||||| ||||||||||||||||||||||||||
seq2  GATCCGGACCATTTCATGATCCTGTAAGCACATCCTTCCATTTAGCATAC  249

seq1  CCCAGTTTACTGGGGCTGGTATTAGCATGTTGTTCAGCAGCAGAGCGACC  400
      ||||||||||||||||||||||||| ||||  |||||||||| ||| || 
seq2  CCCAGTTTACTGGGGCTGGTATTAGTATGTCATTCAGCAGCAAAGCAACA  299

seq1  TTCCTTATCCAATTGCAAAAAAATTTAAGGTAAAAAGAGCTAAGGAGAGT  450
      ||||||||||||||| |||||| |||||| |||| |||||||||||||||
seq2  TTCCTTATCCAATTGTAAAAAATTTTAAGATAAAGAGAGCTAAGGAGAGT  349

seq1  CGTATTTTGGGGGTATGGCCATAGCCTATTCCCCCTTTTTGTTTTATTAA  500
      | ||| || ||||||||  ||||||||||| |||| ||||||||||||||
seq2  CTTATCTTTGGGGTATGATCATAGCCTATTTCCCCATTTTGTTTTATTAA  399

seq1  TAATTCTTTTAAGGTTCTATGTGCTCGTTCAATGATTCCTTGGCCTTGAG  550
      |||||||||||||||||||||||||| || |||||||| |||||||||||
seq2  TAATTCTTTTAAGGTTCTATGTGCTCATTTAATGATTCTTTGGCCTTGAG  449

seq1  GATTATATGGCAGGCCGTGTTTAACTTGTACTTCCATATGTTAACAAAAA  600
      ||||||||||||||||||||||||||||||||||||| |||| |||||||
seq2  GATTATATGGCAGGCCGTGTTTAACTTGTACTTCCATCTGTTGACAAAAA  499

seq1  GACTCCAGGGTTTTGGCAGTATATGCAGGGCCATTATCTCTTTTAAGTTG  650
      ||| ||| ||||||||||||||||||||||||||||||||||||||||||
seq2  GACACCATGGTTTTGGCAGTATATGCAGGGCCATTATCTCTTTTAAGTTG  549

seq1  TTGGGGTTTACCCCAAGCTGCCCAGGCCTCCAAACAATGCTGTATAACAT  700
      |||||||||||| ||||||| | ||| |||||||||||| ||||||||||
seq2  TTGGGGTTTACCTCAAGCTGTCTAGGTCTCCAAACAATGTTGTATAACAT  599

seq1  GGGAGGCCTTTTCCCCTGCCATGGAAGATGCATAAACTATTCCTGAACAT  750
      ||||||||||||| |||||||||| |||||||||||||||| ||||||||
seq2  GGGAGGCCTTTTCTCCTGCCATGGGAGATGCATAAACTATTTCTGAACAT  649

seq1  GTATCAATGGATACATGAACGTATTTCAATTTGCCAAATTCTG-------  793
      |||||||||||||||||||| ||||||||| ||||||| | ||       
seq2  GTATCAATGGATACATGAACATATTTCAATCTGCCAAAATTTGAAAAATG  699

seq1  --------------------------------------------------  793
                                                        
seq2  TGTCACATCCATCTGCCACACCTGTAGAGGAAGCAATCCTCTAGGATTCG  749

seq1  --------------------------------------------------  793
                                                        
seq2  CTCTATAAGAAGGCGGGTGTTGAAACTCAAGGCAAAGTCCACAGGTAGTG  799

seq1  --------------------------------------------------  793
                                                        
seq2  ACTACATCCCGAGCTTGTGCCCTAGAGATTCCAAATTTTCTCTGCAGAGT  849

seq1  --------------------------------------------------  793
                                                        
seq2  TTTAGCATTAACATGAAATTTAGAATGAAATTGTGAGGCTAACTCCATAG  899

seq1  --------------------------------------------------  793
                                                        
seq2  GGGATGCTAAAAATATGAACTCCATACGAGTACAATTATCCACATATCAT  949

seq1  --------------------------------------------------  793
                                                        
seq2  TTCCCCTACCTAAGGTCCTGGAAGCCTACTATGGGCATGAACATGTCCAT  999

seq1  -----AATGGTTGGCGTCTTTCCCACAGCAACTTCTGTAATTATAAGGCC  838
           ||||||||||||||||||||||||||||||||||||| |||||||
seq2  TATATAATGGTTGGCGTCTTTCCCACAGCAACTTCTGTAATTGTAAGGCC  1049

seq1  AAGGCTTGGATGGTACTACG-GCTTTTATTTGGCCAGCCACTTTTAGGGA  887
       |||| ||||||||||||||  |||||| |||||||||||||| ||||||
seq2  -AGGC-TGGATGGTACTACGAACTTTTA-TTGGCCAGCCACTTCTAGGGA  1096

seq1  TAAAACTAAATTAACTACATATTGTGAATCTGAAATTAGATTAAAAGGAA  937
      |  ||||||||  |||||| |||||| |||||||||| |||| |||||||
seq2  T--AACTAAAT--ACTACA-ATTGTG-ATCTGAAATT-GATT-AAAGGAA  1138

seq1  A  938
      |
seq2  A  1139

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information