BAC Information

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BAC

Clone NameB6Ng01-045J22
ChromosomeX (Build37)
Map Location 114,161,674 - 114,162,787
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100039277, Cpxcr1, EG624153, LOC100039300, EG665045, LOC100039319
Downstream geneLOC624284, LOC665066, EG624388
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-045J22.bB6Ng01-045J22.g
ACCDH871023DH871024
length1,1021,145
definitionDH871023|Mus musculus domesticus DNA, BAC clone: B6Ng01-045J22, 5' end.DH871024|Mus musculus domesticus DNA, BAC clone: B6Ng01-045J22, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccaaattttagttcaaagggaactccagatggctcacaagtttgc
taaatccacaaactatatataaaaagaaaatgaacaaagcaatgtcagat
gtaaaacaatgtttgcctttatggattccaattacacacacacacacaca
cacacacacacacacacacacacacacacacacaatcactgacatttgac
aaaaggaaatgaagtgaagaaggcacaagcaaaactagggttctaaagct
gcagaaattatttccacctttcttaatgaaaggacaatatacactccatt
tgtctccatttatgaaccttatttgtctctattttaaagaccagacctga
tttcaaaaatggccataaggcaccagcttcaggaatagaccatgagtccc
agaaactaagtcataagacaccggctctaaggaacagaccataaaatcca
gaacaagatcataaaaccccctcctaaagaacaacctggggatgatcaca
aaaatggggaaatattttatctcagaatgggccatctgtgctgggcagcc
ctatttcatcacatggttaaacattaatgataaaggaatgcagaccactg
accacctgcgacaccccccagcatccccaaatgaaattttagatcaccta
atccttctagtgagttcccctggttccttataaaaaggtctgcatgcctt
tttctggggttgccaattcagagaatggtggactttagcatgctggttgt
ttctgcagaataaatgctctgtgtttttgcatgctatctgagtcttgggt
ctttctttagcaatttgtggacacttacactacttttgcaagattattga
gctcaagcaaaattctgagagttgtgaacaaaagttcacagttctcctgt
gttcactttttacataggctgattaaaatttccatgattttggagagatt
ggaatgctgtaattcaaagcctaaataaaaatgtcctggtcaatcttggc
ctctgaatgaccatttccatcctttgttatcacctagcagaattgtcacc
attaataaatctttggaagtggttagttgctttcttatttgttggtaaaa
ca
gaattctttgttcagttctgagccccattttttaattgggttatttgatt
ttctggagtaccccttcttgagttcttcatatatattggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttattgacggtgtattttgccttgcagaatctttgcagtttca
tgagttcccatttgtcaattcttgatcttacagtgcaagccattgctgtt
ctattcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgcctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagataggaatggaacgcattct
tctacatgataacaaccggttgtgccagcaccatttgttgaaaatgctgt
ctttcttccactgggtggttttagctcccttgtcgaagatcaagtgtcca
taggtgtgtgggtatcatcctgagtgaggtaacacaatcacaaaggaact
catacaatatgtactcagtgataagtggatattatcccaaaacttaggat
acccaagatataagatacaatttgctaaacgcatgaaattcaagaagaat
gaagaccaaagtgtggacactgtgccccttcttagaattgggaacaaaac
acccatggaaggaattacagagacaaatttggagctgagacgaaaggatg
gaccatctagagactgccatatccagggatccaccccataatcagcctcc
aaacgctgataccattgcatttactagcagattttgctgaaaggaccaga
tatagctgtctcatgtgagatatgctggggcctagcaacacagaagtgga
tgctcacagtcagatatggatggatcacaggctccattgaggagctagag
aagtacccagaggcaaggcatctgcaacctagagtagaacaccttatgac
taccagtactcgagttctggactctgctgctatgtatcaaaagaaaggct
agtccgctctactgaagaaaggccatgacacacagactttattatgctcg
ctcacgggaacacaggccaaaaatggataggggtggtgggagaat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_114161674_114162787
seq2: B6Ng01-045J22.b_43_1144 (reverse)

seq1  TGTTTTATCACAACAATAGAAAGCAAACTAAAACACATTCCAAAGGATTT  50
      ||||||| ||  | |  ||||||| |||| || ||| ||||||| |||||
seq2  TGTTTTACCAACAAATAAGAAAGC-AACT-AACCAC-TTCCAAA-GATTT  46

seq1  TATTTAATGGTGACAATACTGCTAAGTGATATACAAAGGATGGAAATGGT  100
         |||||||||||||| |||||| |||||| ||||||||||||||||||
seq2  --ATTAATGGTGACAATTCTGCTAGGTGATA-ACAAAGGATGGAAATGGT  93

seq1  CATTCAAGAGGCCAAGATTGACCAGGACAATTTTTATTTAGGCTTTGAAT  150
      ||||| |||||||||||||||||||||| |||||||||||||||||||| 
seq2  CATTC-AGAGGCCAAGATTGACCAGGAC-ATTTTTATTTAGGCTTTGAA-  140

seq1  TTACAGCATTCCAATCTCTCCAAAATCATGGAAATTTTAATCAGCCTATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAGCATTCCAATCTCTCCAAAATCATGGAAATTTTAATCAGCCTATG  190

seq1  TAAAAAGTTGAACACAGGAGAACTGTGAACTTTTGTTCACAACTCTCAGA  250
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAAG-TGAACACAGGAGAACTGTGAACTTTTGTTCACAACTCTCAGA  239

seq1  ATTTTTGCTTGAGCTCAATAATCTTGCAAAAGTAGTGTAAGTGTCCACAA  300
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  A-TTTTGCTTGAGCTCAATAATCTTGCAAAAGTAGTGTAAGTGTCCACAA  288

seq1  ATTGCTAAAGGAAGACCCAAGACTCAGATAGCATGCAAAAACACAGAGCA  350
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  ATTGCTAAAGAAAGACCCAAGACTCAGATAGCATGCAAAAACACAGAGCA  338

seq1  TTTATTCTGCAGAAACAACCAGCATGCTAAAGTCCACCATTCTCTGAATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTCTGCAGAAACAACCAGCATGCTAAAGTCCACCATTCTCTGAATT  388

seq1  GGCAACCCCAGAAAAAGGCATGCAGACCTTTTTATAAGGAACCAGGGGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAACCCCAGAAAAAGGCATGCAGACCTTTTTATAAGGAACCAGGGGAA  438

seq1  CTCACTAGAAGGATTAGGTGATCTAAAATTTCATTTGGGGATGCTGGGGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACTAGAAGGATTAGGTGATCTAAAATTTCATTTGGGGATGCTGGGGG  488

seq1  GTGTCGCAGGTGGTCAGTGGTCTGCATTCCTTTATCATTAATGTTTAACC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCGCAGGTGGTCAGTGGTCTGCATTCCTTTATCATTAATGTTTAACC  538

seq1  ATGTGATGAAATAGGGCTGCCCAGCACAGATGGCCCATTCTGAGATAAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGATGAAATAGGGCTGCCCAGCACAGATGGCCCATTCTGAGATAAAA  588

seq1  TATTTCCCCATTTTTGTGATCATCCCCAGGTTGTTCTTTAGGAGGGGGTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTCCCCATTTTTGTGATCATCCCCAGGTTGTTCTTTAGGAGGGGGTT  638

seq1  TTATGATCTTGTTCTGGATTTTATGGTCTGTTCCTTAGAGCCGGTGTCTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGATCTTGTTCTGGATTTTATGGTCTGTTCCTTAGAGCCGGTGTCTT  688

seq1  ATGACTTAGTTTCTGGGACTCATGGTCTATTCCTGAAGCTGGTGCCTTAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACTTAGTTTCTGGGACTCATGGTCTATTCCTGAAGCTGGTGCCTTAT  738

seq1  GGCCATTTTTGAAATCAGGTCTGGTCTTTAAAATAGAGACAAATAAGGTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCATTTTTGAAATCAGGTCTGGTCTTTAAAATAGAGACAAATAAGGTT  788

seq1  CATAAATGGAGACAAATGGAGTGTATATTGTCCTTTCATTAAGAAAGGTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAAATGGAGACAAATGGAGTGTATATTGTCCTTTCATTAAGAAAGGTG  838

seq1  GAAATAATTTCTGCAGCTTTAGAACCCTAGTTTTGCTTGTGCCTTCTTCA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATAATTTCTGCAGCTTTAGAACCCTAGTTTTGCTTGTGCCTTCTTCA  888

seq1  CTTCATTTCCTTTTGTCAAATGTCAGTGATTGTGTGTGTGTGTGTGTGTG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCATTTCCTTTTGTCAAATGTCAGTGATTGTGTGTGTGTGTGTGTGTG  938

seq1  TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAATTGGAATCCATAAAGGC  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAATTGGAATCCATAAAGGC  988

seq1  AAACATTGTTTTACATCTGACATTGCTTTGTTCATTTTCTTTTTATATAT  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACATTGTTTTACATCTGACATTGCTTTGTTCATTTTCTTTTTATATAT  1038

seq1  AGTTTGTGGATTTAGCAAACTTGTGAGCCATCTGGAGTTCCCTTTGAACT  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTGTGGATTTAGCAAACTTGTGAGCCATCTGGAGTTCCCTTTGAACT  1088

seq1  AAAATTTGGAATTC  1114
      ||||||||||||||
seq2  AAAATTTGGAATTC  1102