BAC Information

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BAC

Clone NameB6Ng01-045J23
ChromosomeX (Build37)
Map Location 3,036,459 - 3,037,455
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC385516
Downstream geneLOC434721, LOC668957, LOC100043932, OTTMUSG00000016406, LOC673743, OTTMUSG00000016405, OTTMUSG00000016411, LOC668961, LOC100042159, LOC100042168, LOC627187, LOC100042185, OTTMUSG00000016407, OTTMUSG00000016437
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-045J23.bB6Ng01-045J23.g
ACCDH871025DH871026
length1,154986
definitionDH871025|Mus musculus domesticus DNA, BAC clone: B6Ng01-045J23, 5' end.DH871026|Mus musculus domesticus DNA, BAC clone: B6Ng01-045J23, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccaagaagttatagaattcaactaaagtgaagacatatcatacca
aatatcatggggcacaatttaaacagcattaagtgaaaaattcatagcat
taaatgcctttgtaaagaattttcaagagattctatacaagcaagttaaa
agaacacctaacatctctagaacagaaagaagcaaagtacaccaaagaag
agtagatgtgaggatattgtcaagctcagggctgaaatcaactggttaga
aactaagagaatgattcaaaaaatcaacaaaccaagagctggtttgttaa
gaaaatcaacaagatagatatgatatacccttagccaaattaactaaagg
gcacagagacagtatccaaactaacaaaatcagaaatgaaaaagagacat
aacaacagaatctgagaaaattcaagaaaatcatctgaagcaactacaaa
agcatttagctctacaaaactgaaaacatctagatggctttctgtactaa
agtcaaatcaaggtcaggtaaactatctaaacagtcctataacacctaag
acaatacagagagttatcaaaaaacctcccaaacaaaaaagtccaatgcc
agactgttttagtgaagaattctaccagaccttaaataacatctaatacc
attactcctcaaactattccacaaaatagaaacaaaagaaaaactatcct
atttcattctatgaagccacaatttactgtgatacctaaatcacacaaag
atctcaactaagaaagagaacttcagatcaatcttgcctatgaatattgg
tgcaaaaataatcaacaaaattcttgcaaactgaatctagaacacatcaa
atcttttatttatatgattagtagcttcagtctacgatacagggattgtt
catatatacatacttcacatatatactatataacacccagagaatcacat
gatcatctcatagatgctgaacagctcataaattaatcatcatgtaagtc
tggagatcagatcgagcatattactatagcgattaggcataacgcactga
ttatgaagatagcattccttaatcagtcagcagtgccctttctacatcca
tcgactcagctgctgacagtataagaggtcaggagtgacatgaaggaact
tagc
gaattcactgacagaaaggaaaggtggtgctcaaagtctcagggcagttc
tacaatgcataggcaagcaataccatttaaatggagagatttaaaaaaaa
tcatttcttcacccataaaccagaaccaattattcaatatagccaagtaa
catgttttattagagttatttctgaattagatcattgaacaggattctaa
cctagataacaaattttatctaaaacattttctagaccaaaaagcatgct
ttgagccctccttaaataaaaaggcccatagtgtatgaaactaatcaacc
atagatcctatatttactccaccaatcctcaggacagtttacgctctttg
ttctagttgggattttatttatgtgaacagacatcatgaccatggcaagt
attataaaggacaacatttaattggggccggcttacaggttcagaggttc
aggccattatcattgtattagtcattgtattagtctggagccccttcaag
atctaacacaaaagcctatcactcctgtgtcaagatccaaaccaaaggca
cattgtcttcatgcttcaatatcgggctcacaggtttgccctccatttct
agattgaagttcattgcaatatactcaagttgacaaccaagaatagtcat
cacaatgtgtatggagagagtaaacatccttatattcctctgtttagtga
attgcttaagagttttcttcatttaaattgattttggctataatataggc
ttgctgtaaactgtctttaatagtggtggagggattattcagtttttacc
tctagtttcttcaggatcgtattttgaaaagaatttaaaacttaggcagt
ttctgcagcaaagtggtagtaaagacaatctttaatccagcagctggagc
agagcagtggatccttgagttcagtcatctgtctacagatgagatcagac
tgctgactacacagagacctgtctcaaatcaaacca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_3036459_3037455
seq2: B6Ng01-045J23.g_67_1052

seq1  GAATTCACTGACAGAAAGGAAAGGTGATGCTCAAAGTCTCAGGGCAGTGC  50
      |||||||||||||||||||||||||| ||||||||||||||||||||| |
seq2  GAATTCACTGACAGAAAGGAAAGGTGGTGCTCAAAGTCTCAGGGCAGTTC  50

seq1  TACAATGCATAGGCAAGCAATACCATTTAAATGGAGAGATTTAAAAAAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAATGCATAGGCAAGCAATACCATTTAAATGGAGAGATTTAAAAAAAA  100

seq1  TCATTTCTTCACCCATAAACCAGAACCAATTATTCAATATGGTCAAGTAC  150
      |||||||||||||||||||||||||||||||||||||||| | |||||| 
seq2  TCATTTCTTCACCCATAAACCAGAACCAATTATTCAATATAGCCAAGTAA  150

seq1  CATGTTTTATTAGAGTTATTTCTGAATTAGATCATTGAACAGGATTCTAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTTTTATTAGAGTTATTTCTGAATTAGATCATTGAACAGGATTCTAA  200

seq1  CCTAAATAACAAATTTTATCTAAAACATTTTCTAGACTAAAAAGCATGCT  250
      |||| |||||||||||||||||||||||||||||||| ||||||||||||
seq2  CCTAGATAACAAATTTTATCTAAAACATTTTCTAGACCAAAAAGCATGCT  250

seq1  TTGAGCCCTCCTTAAATAAAAAGGCCCATAGTGTATGAAACTAATCAACC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGCCCTCCTTAAATAAAAAGGCCCATAGTGTATGAAACTAATCAACC  300

seq1  ATAGATCCTATATTTACTCCACCAATCCTCAGGACAGTTTATACTCTTTG  350
      |||||||||||||||||||||||||||||||||||||||||  |||||||
seq2  ATAGATCCTATATTTACTCCACCAATCCTCAGGACAGTTTACGCTCTTTG  350

seq1  TCCTAGTTGGGATTTTATTTATGTGAACAGACATCATGACCATGGCAAGT  400
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAGTTGGGATTTTATTTATGTGAACAGACATCATGACCATGGCAAGT  400

seq1  ATTATAAAGGACAACATTTAATTGGGGCCGGCTTACAGGTTCAGAGGTTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATAAAGGACAACATTTAATTGGGGCCGGCTTACAGGTTCAGAGGTTC  450

seq1  AGGCCATTATCATTGTATTAGTCAGTG---TTCTCTGGAGCCCCTTCAAG  497
      |||||||||||||||||||||||| ||   |  |||||||||||||||||
seq2  AGGCCATTATCATTGTATTAGTCATTGTATTAGTCTGGAGCCCCTTCAAG  500

seq1  ATCTAACACAAAAGCCTATGACTCCAGTGTCAAGATCCAAACCAAAGGCA  547
      ||||||||||||||||||| ||||| ||||||||||||||||||||||||
seq2  ATCTAACACAAAAGCCTATCACTCCTGTGTCAAGATCCAAACCAAAGGCA  550

seq1  CATTGTCTTCATGCTTCAATATCGGGCTCACAGGTTTGCCCTCCATTTCT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGTCTTCATGCTTCAATATCGGGCTCACAGGTTTGCCCTCCATTTCT  600

seq1  AGATTCAAGTTCATTGCAAATATACTCAAGTTGGCAACCAAGAATAGTCA  647
      ||||| ||||||||||| ||||||||||||||| ||||||||||||||||
seq2  AGATTGAAGTTCATTGC-AATATACTCAAGTTGACAACCAAGAATAGTCA  649

seq1  TCACAATGTGTAAGGAGAGAGTAAACATCCTTATATTCCTCTGTTTAGTG  697
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  TCACAATGTGTATGGAGAGAGTAAACATCCTTATATTCCTCTGTTTAGTG  699

seq1  AAATTGCTT-AGAGTTTTTCTCCATTTAAATTGATATTGGCTAT-ATATA  745
       |||||||| |||| |||||| ||||||||||||| |||||||| |||||
seq2  -AATTGCTTAAGAG-TTTTCTTCATTTAAATTGATTTTGGCTATAATATA  747

seq1  GGCTTGCTGTAAACTGCCTTT-ATAGT-GTGGAGGTA-TATCCAG-TTTT  791
      |||||||||||||||| |||| ||||| ||||||| | ||| ||| ||||
seq2  GGCTTGCTGTAAACTGTCTTTAATAGTGGTGGAGGGATTATTCAGTTTTT  797

seq1  ACCCCTAGTTTCTTCAGGACTGTTATTTTG-AAAGAATCTTAAACTTAGG  840
      ||| ||||||||||||||| |  ||||||| ||||||| | |||||||||
seq2  ACCTCTAGTTTCTTCAGGA-TCGTATTTTGAAAAGAATTTAAAACTTAGG  846

seq1  CAGTTTCTGCAGCAAAGTGGTAGTAAAGCACATCTTTAATCCCAGCAGGT  890
      ||||||||||||||||||||||||||||   ||||||||| ||||||| |
seq2  CAGTTTCTGCAGCAAAGTGGTAGTAAAGACAATCTTTAAT-CCAGCAGCT  895

seq1  GGGAAGCAGAGGAAGTTGGATCTCTGTGAGTTCAAGGCCATCCTGGTCTA  940
      ||  ||||||| |   |||||| || ||||||||  | ||||   |||||
seq2  GG--AGCAGAGCA--GTGGATC-CT-TGAGTTCA--GTCATC--TGTCTA  935

seq1  CAGAATGAGATCCAAGACTGCCTAGACTACACAGAGAAACCCTGTCTCAA  990
      ||| ||||||||  |||||||   |||||||||||||   ||||||||||
seq2  CAG-ATGAGATC--AGACTGC--TGACTACACAGAGA---CCTGTCTCAA  977

seq1  A--AAACCA  997
      |  ||||||
seq2  ATCAAACCA  986