MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-045J23
Chromosome	X (Build37)
Map Location	3,036,459 - 3,037,455
singlet/doublet	singlet
Overlap gene	none
Upstream gene	LOC385516
Downstream gene	LOC434721, LOC668957, LOC100043932, OTTMUSG00000016406, LOC673743, OTTMUSG00000016405, OTTMUSG00000016411, LOC668961, LOC100042159, LOC100042168, LOC627187, LOC100042185, OTTMUSG00000016407, OTTMUSG00000016437
Link	Open Mouse BAC browser

Click to get alignment info.

name	LOC385516 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:385516
definition	gene_synonym : Gm1547; Gm654 note : hypothetical LOC385516 pseudo : _no_value

name	LOC434721 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:434721
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 1 EST, 26 Proteins

name	LOC668957 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668957
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 10 Proteins pseudo : _no_value

name	LOC100043932 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043932
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	OTTMUSG00000016406 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:668958 MGI:3709280
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 mRNAs, 12 ESTs, 14 Proteins

name	LOC673743 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:673743
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 Proteins pseudo : _no_value

name	OTTMUSG00000016405 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:630022 MGI:3709282
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 mRNAs, 12 ESTs, 15 Proteins

name	OTTMUSG00000016411 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:668960 MGI:3709278
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 mRNAs, 12 ESTs, 15 Proteins

name	LOC668961 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668961
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 1 EST, 26 Proteins

name	LOC100042159 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042159
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 mRNAs, 12 ESTs, 15 Proteins

name	LOC100042168 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042168
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 mRNAs, 12 ESTs, 15 Proteins

name	LOC627187 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:627187
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 12 Proteins pseudo : _no_value

name	LOC100042185 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042185
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs

name	OTTMUSG00000016407 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:627264 MGI:3709183
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 mRNAs, 11 ESTs, 10 Proteins

name	OTTMUSG00000016437 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:668964 MGI:3709272
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 mRNAs, 12 ESTs, 15 Proteins

name	LOC434721 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:94406944 GeneID:434721
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 1 EST, 26 Proteins product : similar to 4930408F14Rik protein transcript_id : XM_486606.3

name	OTTMUSG00000016406 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94406945 GeneID:668958 MGI:3709280
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 mRNAs, 12 ESTs, 14 Proteins product : predicted gene, OTTMUSG00000016406 transcript_id : XM_001006590.1

name	OTTMUSG00000016405 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94406948 GeneID:630022 MGI:3709282
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 mRNAs, 12 ESTs, 15 Proteins product : predicted gene, OTTMUSG00000016405 transcript_id : XM_895197.2

name	OTTMUSG00000016411 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94406949 GeneID:668960 MGI:3709278
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 mRNAs, 12 ESTs, 15 Proteins product : predicted gene, OTTMUSG00000016411 transcript_id : XM_001006594.1

name	LOC668961 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:94406951 GeneID:668961
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 1 EST, 26 Proteins product : similar to 4930408F14Rik protein transcript_id : XM_001006595.1

name	LOC100042159 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149270905 GeneID:100042159
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 mRNAs, 12 ESTs, 15 Proteins product : similar to mgclh transcript_id : XM_001474533.1

name	LOC100042168 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149270907 GeneID:100042168
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 mRNAs, 12 ESTs, 15 Proteins product : similar to mgclh transcript_id : XM_001474553.1

name	LOC100042185 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149270909 GeneID:100042185
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs product : similar to 4930408F14Rik protein transcript_id : XM_001474570.1

name	OTTMUSG00000016407 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94406954 GeneID:627264 MGI:3709183
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 mRNAs, 11 ESTs, 10 Proteins product : predicted gene, OTTMUSG00000016407 transcript_id : XM_891923.2

name	OTTMUSG00000016437 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94406957 GeneID:668964 MGI:3709272
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 mRNAs, 12 ESTs, 15 Proteins product : predicted gene, OTTMUSG00000016437 transcript_id : XM_001006598.1

name	LOC434721 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:51771877 GeneID:434721
definition	codon_start : 1 product : similar to 4930408F14Rik protein protein_id : XP_486606.1

name	OTTMUSG00000016406 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94406946 GeneID:668958 MGI:3709280
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001006590.1

name	OTTMUSG00000016405 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:83006307 GeneID:630022 MGI:3709282
definition	codon_start : 1 product : hypothetical protein protein_id : XP_900290.1

name	OTTMUSG00000016411 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94406950 GeneID:668960 MGI:3709278
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001006594.1

name	LOC668961 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:94406952 GeneID:668961
definition	codon_start : 1 product : similar to 4930408F14Rik protein protein_id : XP_001006595.1

name	LOC100042159 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149270906 GeneID:100042159
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001474583.1

name	LOC100042168 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149270908 GeneID:100042168
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001474603.1

name	LOC100042185 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149270910 GeneID:100042185
definition	codon_start : 1 product : similar to 4930408F14Rik protein protein_id : XP_001474620.1

name	OTTMUSG00000016407 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82999652 GeneID:627264 MGI:3709183
definition	codon_start : 1 product : hypothetical protein protein_id : XP_897016.1

name	OTTMUSG00000016437 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94406958 GeneID:668964 MGI:3709272
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001006598.1

name	LOC668957 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668957
definition	number : 1 pseudo : _no_value

name	LOC668957 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668957
definition	number : 2 pseudo : _no_value

name	LOC668957 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668957
definition	number : 3 pseudo : _no_value

name	LOC100043932 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043932
definition	number : 2 pseudo : _no_value

name	LOC100043932 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043932
definition	number : 1 pseudo : _no_value

name	LOC673743 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:673743
definition	number : 3 pseudo : _no_value

name	LOC673743 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:673743
definition	number : 2 pseudo : _no_value

name	LOC673743 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:673743
definition	number : 1 pseudo : _no_value

name	LOC627187 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:627187
definition	number : 2 pseudo : _no_value

name	LOC627187 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:627187
definition	number : 1 pseudo : _no_value

clone name	B6Ng01-197A21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-045J23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-211F08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-244C11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-256M02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-306L05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-310M07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-055J15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-290F22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-069G02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-241C09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-229A13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-309C20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-340D16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-079M03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-035P15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-350D07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-035B10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-036E01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-293I19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-338L03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-338F07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-182I24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-284G03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-132P24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-262J20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-303N04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-018F14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-121A16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-160O09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-135N22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-091I03
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-045J23.b	B6Ng01-045J23.g
ACC	DH871025	DH871026
length	1,154	986
definition	DH871025\|Mus musculus domesticus DNA, BAC clone: B6Ng01-045J23, 5' end.	DH871026\|Mus musculus domesticus DNA, BAC clone: B6Ng01-045J23, 3' end.
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	gaattccaagaagttatagaattcaactaaagtgaagacatatcatacca aatatcatggggcacaatttaaacagcattaagtgaaaaattcatagcat taaatgcctttgtaaagaattttcaagagattctatacaagcaagttaaa agaacacctaacatctctagaacagaaagaagcaaagtacaccaaagaag agtagatgtgaggatattgtcaagctcagggctgaaatcaactggttaga aactaagagaatgattcaaaaaatcaacaaaccaagagctggtttgttaa gaaaatcaacaagatagatatgatatacccttagccaaattaactaaagg gcacagagacagtatccaaactaacaaaatcagaaatgaaaaagagacat aacaacagaatctgagaaaattcaagaaaatcatctgaagcaactacaaa agcatttagctctacaaaactgaaaacatctagatggctttctgtactaa agtcaaatcaaggtcaggtaaactatctaaacagtcctataacacctaag acaatacagagagttatcaaaaaacctcccaaacaaaaaagtccaatgcc agactgttttagtgaagaattctaccagaccttaaataacatctaatacc attactcctcaaactattccacaaaatagaaacaaaagaaaaactatcct atttcattctatgaagccacaatttactgtgatacctaaatcacacaaag atctcaactaagaaagagaacttcagatcaatcttgcctatgaatattgg tgcaaaaataatcaacaaaattcttgcaaactgaatctagaacacatcaa atcttttatttatatgattagtagcttcagtctacgatacagggattgtt catatatacatacttcacatatatactatataacacccagagaatcacat gatcatctcatagatgctgaacagctcataaattaatcatcatgtaagtc tggagatcagatcgagcatattactatagcgattaggcataacgcactga ttatgaagatagcattccttaatcagtcagcagtgccctttctacatcca tcgactcagctgctgacagtataagaggtcaggagtgacatgaaggaact tagc	gaattcactgacagaaaggaaaggtggtgctcaaagtctcagggcagttc tacaatgcataggcaagcaataccatttaaatggagagatttaaaaaaaa tcatttcttcacccataaaccagaaccaattattcaatatagccaagtaa catgttttattagagttatttctgaattagatcattgaacaggattctaa cctagataacaaattttatctaaaacattttctagaccaaaaagcatgct ttgagccctccttaaataaaaaggcccatagtgtatgaaactaatcaacc atagatcctatatttactccaccaatcctcaggacagtttacgctctttg ttctagttgggattttatttatgtgaacagacatcatgaccatggcaagt attataaaggacaacatttaattggggccggcttacaggttcagaggttc aggccattatcattgtattagtcattgtattagtctggagccccttcaag atctaacacaaaagcctatcactcctgtgtcaagatccaaaccaaaggca cattgtcttcatgcttcaatatcgggctcacaggtttgccctccatttct agattgaagttcattgcaatatactcaagttgacaaccaagaatagtcat cacaatgtgtatggagagagtaaacatccttatattcctctgtttagtga attgcttaagagttttcttcatttaaattgattttggctataatataggc ttgctgtaaactgtctttaatagtggtggagggattattcagtttttacc tctagtttcttcaggatcgtattttgaaaagaatttaaaacttaggcagt ttctgcagcaaagtggtagtaaagacaatctttaatccagcagctggagc agagcagtggatccttgagttcagtcatctgtctacagatgagatcagac tgctgactacacagagacctgtctcaaatcaaacca
quality values	Open. Hide. 57 28 21 33 61 61 37 14 43 61 61 61 61 61 61 43 61 61 61 61 61 47 61 43 47 61 61 43 28 25 14 21 23 28 25 22 19 52 55 52 61 59 61 59 61 61 61 61 59 59 61 59 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 43 43 37 43 59 59 61 61 61 59 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 59 61 61 61 61 59 61 59 59 52 59 59 61 59 61 61 61 61 61 61 61 61 59 61 61 61 61 61 59 61 61 61 61 59 61 59 59 61 61 59 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 59 59 59 61 59 61 61 59 59 61 61 61 61 59 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 59 61 61 61 59 59 61 59 59 59 59 61 59 59 59 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 55 55 52 55 55 55 55 55 55 52 55 61 52 55 61 61 55 55 55 55 55 55 61 61 61 61 61 55 61 61 55 55 61 52 61 61 52 55 61 55 55 55 55 41 50 50 55 55 55 50 55 50 50 61 61 61 61 55 50 61 61 61 61 61 61 61 61 61 61 61 61 50 61 55 50 55 55 55 50 43 49 55 43 43 61 61 61 61 61 61 61 45 61 61 61 61 50 61 53 50 61 61 61 61 61 53 61 52 52 61 53 61 61 61 50 50 50 50 50 50 50 50 50 38 50 50 52 50 50 50 52 61 53 53 47 46 61 52 50 42 47 31 45 52 53 53 61 61 61 47 47 47 47 50 53 53 61 61 53 57 47 57 57 45 57 53 57 38 57 53 50 45 47 50 45 57 57 53 52 50 50 46 53 53 45 53 50 53 57 42 50 53 40 57 39 42 34 34 47 53 52 53 50 45 47 42 34 35 21 30 39 40 42 43 42 41 31 45 40 34 32 45 37 34 41 36 52 35 23 45 45 45 50 39 40 57 29 57 50 50 57 45 42 42 27 57 57 45 38 37 35 45 45 28 42 35 16 33 45 47 20 50 50 57 57 46 31 37 21 35 24 35 37 34 9 37 30 30 53 23 33 50 12 57 57 38 32 24 44 47 27 33 25 37 38 18 20 32 33 29 22 29 17 29 40 11 23 23 33 31 57 34 24 17 44 25 23 34 29 33 23 38 29 34 30 25 14 19 33 24 20 18 14 27 37 24 28 57 37 30 34 33 19 23 12 37 16 37 19 37 57 31 24 29 23 39 32 32 27 17 30 45 25 10 47 45 45 45 30 13 20 29 8 15 8 27 30 22 46 9 17 21 31 28 29 25 25 30 27 34 35 28 23 23 10 18 15 19 5 46 17 18 28 16 24 17 31 37 26 29 20 13 29 34 51 32 29 31 15 21 12 18 9 27 34 29 22 5 14 5 12 18 20 21 29 23 18 12 29 43 25 21 29 14 17 32 18 15 29 26 16 17 13 6 9 6 11 24 29 29 28 29 12 10 20 28 31 28 33 14 20 12 14 30 22 31 10 20 12 23 30 46 51 19 28 14 23 22 20 31 8 15 15 41 36 20 18 23 28 14 39 29 16 20 32 13 21 27 24 24 16 18 22 14 30 11 29 12 18 10 7 10 33 23 21 33 18 5 25 8 38 51 6 10 22 51 9 8 5 4 5 38 33 20 14 31 10 25 5 5 8 19 15 25 25 22 8 14 12 6 3 4 10 19 10 10 5 7 30 24 7 9 27 38 15 20 13 33 13 12 26 9 15 7 13 17 4 14 14 28 21 17 31 8 15 25 35 9 6 6 8 12 20 11 12 16 6 10 12 4 6 3 10 3 7 6 5 4 7 14 4 3 3 7 6 15 13 18 28 16 14 18 9 10 11 12 29 6 14 25 14 25 21 13 15 23 6 9 11 7 23 19 10 22 15 8 30 20 10 21 8 5 3 3 6 22 11 14 7 10 9 4 12 11 11 6 27 5 14 7 2 4 12 19 5 17 5 8 8 7 17 4 5 3 3 4 9 9 13 6 13 20 7 4 1 7 5 15 7 12 4 3 3 4 13 9 7 10 8 11 4 4 5 6 5 22 5 8 18 6 16 18 10 8 13 4 2 3 6 17 5 4 14 12 3 5 7 11 4 12 6 13 3 3 7 4 3 4 5 2 1 3 2 7 4 24 3 7 18 6 6 6 13 6 5 5 7 4 4 1 2 2 2 9 4 13 11 4 5 13 5 3 2 1 3 3 5 7 1 13 20 13 4 4 9 8 5 13 13 5 5 5 5 4 18 18 7 8 1 7 13 13 4 9 9 5 5 8 14 4	Open. Hide. 61 49 52 49 61 49 49 24 20 27 12 26 13 12 21 22 31 59 59 59 59 59 59 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 59 59 49 59 32 28 36 44 41 45 59 61 61 61 61 59 61 61 61 61 59 59 59 59 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 59 55 59 61 61 61 61 61 61 61 61 61 61 61 61 61 49 59 59 59 43 59 61 59 59 61 59 59 49 55 59 59 61 59 61 61 61 61 61 61 59 59 61 61 61 61 59 59 59 61 59 61 61 59 59 59 59 59 61 61 55 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 59 61 59 61 61 61 59 59 59 61 61 59 59 61 59 61 61 61 59 61 61 61 61 61 61 59 59 59 59 59 59 59 59 59 59 59 59 61 61 55 59 59 59 59 61 61 61 59 61 61 61 61 59 61 59 59 61 61 61 59 61 59 59 52 59 55 55 59 59 59 59 59 61 61 59 61 61 61 61 61 61 59 61 59 59 59 59 59 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 59 59 59 61 61 59 59 61 61 61 61 59 61 59 61 61 61 61 55 55 55 61 55 61 55 52 55 55 49 55 55 55 55 55 55 55 52 61 61 55 61 61 61 61 55 55 55 49 61 55 55 55 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 50 50 61 55 50 55 55 55 50 55 55 50 47 43 61 61 61 55 55 61 61 61 50 61 61 61 61 61 61 61 39 61 61 50 50 52 53 50 53 61 61 61 61 61 61 61 53 50 61 37 53 43 61 50 53 50 50 53 50 40 61 61 61 50 61 53 61 40 61 52 43 53 50 40 61 53 61 53 61 47 61 53 53 53 61 61 61 53 57 57 57 57 57 53 53 53 46 53 57 50 45 47 53 47 53 53 53 53 57 52 53 34 42 35 27 34 42 45 30 42 50 43 53 38 50 50 45 50 47 45 50 38 45 50 47 27 38 43 36 50 45 40 40 37 45 45 39 42 52 50 57 45 30 32 43 50 52 45 27 43 34 30 45 30 38 24 45 36 12 43 27 41 53 28 53 47 46 17 40 36 38 30 28 35 50 37 34 29 38 21 19 25 33 30 36 24 41 38 22 27 31 31 36 27 17 13 12 41 30 22 23 39 39 32 27 36 24 34 57 38 36 29 28 30 37 20 25 11 9 33 20 27 20 17 17 24 31 35 27 14 7 24 24 34 20 26 28 30 12 16 29 27 19 28 30 20 12 29 24 15 10 30 15 33 20 18 23 16 26 23 17 37 27 20 30 9 20 18 32 35 32 14 21 11 9 25 22 19 28 9 19 20 17 9 45 44 23 14 28 24 28 25 27 14 10 16 29 30 19 15 29 25 27 32 12 46 25 28 24 21 29 47 46 13 32 34 18 8 29 6 29 9 29 21 30 46 46 24 13 6 5 30 14 33 36 15 19 37 28 26 19 18 14 8 5 5 10 17 24 20 21 20 18 18 7 8 19 11 7 7 17 21 31 8 28 22 28 28 19 39 41 21 25 17 26 6 13 8 36 10 12 5 8 22 21 13 12 21 6 23 20 15 8 23 11 6 5 14 12 16 9 16 12 24 20 51 46 29 16 12 27 28 5 24 23 18 11 24 29 11 13 13 10 16 17 28 21 22 9 13 7 16 5 7 26 26 22 5 5 30 31 6 9 19 25 26 38 28 8 26 36 12 19 13 15 8 10 20 13 14 13 28 29 17 24 9 22 21 9 10 27 12 35 27 23 14 30 16 10 21 13 19 24 9 12 7 4 4 4 5 4 5 11 44 20 9 13 10 23 19 6 13 32 20 13 23 10 30 9 17 4 11 12 10 18 11 9 16 17 36 6 8 16 10 4 4 1 4 6 7 5 10 14 9 11 6 3 13 14 23 30 11 24 10 23 22 18 18 9 5 17 9 17 12 6 21 12 20 18 5 17 14 15 12 12 9 16 3 6 7 4 5 5 4 5 5 20 5 9 2 3 4 5 3 5 6 5 29 10 13 3 11 9 13 9 6 4 10

Alignment Information

BAC End 1

BAC End 2

seq1: chrX_3036459_3037455
seq2: B6Ng01-045J23.g_67_1052

seq1  GAATTCACTGACAGAAAGGAAAGGTGATGCTCAAAGTCTCAGGGCAGTGC  50
      |||||||||||||||||||||||||| ||||||||||||||||||||| |
seq2  GAATTCACTGACAGAAAGGAAAGGTGGTGCTCAAAGTCTCAGGGCAGTTC  50

seq1  TACAATGCATAGGCAAGCAATACCATTTAAATGGAGAGATTTAAAAAAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAATGCATAGGCAAGCAATACCATTTAAATGGAGAGATTTAAAAAAAA  100

seq1  TCATTTCTTCACCCATAAACCAGAACCAATTATTCAATATGGTCAAGTAC  150
      |||||||||||||||||||||||||||||||||||||||| | |||||| 
seq2  TCATTTCTTCACCCATAAACCAGAACCAATTATTCAATATAGCCAAGTAA  150

seq1  CATGTTTTATTAGAGTTATTTCTGAATTAGATCATTGAACAGGATTCTAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTTTTATTAGAGTTATTTCTGAATTAGATCATTGAACAGGATTCTAA  200

seq1  CCTAAATAACAAATTTTATCTAAAACATTTTCTAGACTAAAAAGCATGCT  250
      |||| |||||||||||||||||||||||||||||||| ||||||||||||
seq2  CCTAGATAACAAATTTTATCTAAAACATTTTCTAGACCAAAAAGCATGCT  250

seq1  TTGAGCCCTCCTTAAATAAAAAGGCCCATAGTGTATGAAACTAATCAACC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGCCCTCCTTAAATAAAAAGGCCCATAGTGTATGAAACTAATCAACC  300

seq1  ATAGATCCTATATTTACTCCACCAATCCTCAGGACAGTTTATACTCTTTG  350
      |||||||||||||||||||||||||||||||||||||||||  |||||||
seq2  ATAGATCCTATATTTACTCCACCAATCCTCAGGACAGTTTACGCTCTTTG  350

seq1  TCCTAGTTGGGATTTTATTTATGTGAACAGACATCATGACCATGGCAAGT  400
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAGTTGGGATTTTATTTATGTGAACAGACATCATGACCATGGCAAGT  400

seq1  ATTATAAAGGACAACATTTAATTGGGGCCGGCTTACAGGTTCAGAGGTTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATAAAGGACAACATTTAATTGGGGCCGGCTTACAGGTTCAGAGGTTC  450

seq1  AGGCCATTATCATTGTATTAGTCAGTG---TTCTCTGGAGCCCCTTCAAG  497
      |||||||||||||||||||||||| ||   |  |||||||||||||||||
seq2  AGGCCATTATCATTGTATTAGTCATTGTATTAGTCTGGAGCCCCTTCAAG  500

seq1  ATCTAACACAAAAGCCTATGACTCCAGTGTCAAGATCCAAACCAAAGGCA  547
      ||||||||||||||||||| ||||| ||||||||||||||||||||||||
seq2  ATCTAACACAAAAGCCTATCACTCCTGTGTCAAGATCCAAACCAAAGGCA  550

seq1  CATTGTCTTCATGCTTCAATATCGGGCTCACAGGTTTGCCCTCCATTTCT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGTCTTCATGCTTCAATATCGGGCTCACAGGTTTGCCCTCCATTTCT  600

seq1  AGATTCAAGTTCATTGCAAATATACTCAAGTTGGCAACCAAGAATAGTCA  647
      ||||| ||||||||||| ||||||||||||||| ||||||||||||||||
seq2  AGATTGAAGTTCATTGC-AATATACTCAAGTTGACAACCAAGAATAGTCA  649

seq1  TCACAATGTGTAAGGAGAGAGTAAACATCCTTATATTCCTCTGTTTAGTG  697
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  TCACAATGTGTATGGAGAGAGTAAACATCCTTATATTCCTCTGTTTAGTG  699

seq1  AAATTGCTT-AGAGTTTTTCTCCATTTAAATTGATATTGGCTAT-ATATA  745
       |||||||| |||| |||||| ||||||||||||| |||||||| |||||
seq2  -AATTGCTTAAGAG-TTTTCTTCATTTAAATTGATTTTGGCTATAATATA  747

seq1  GGCTTGCTGTAAACTGCCTTT-ATAGT-GTGGAGGTA-TATCCAG-TTTT  791
      |||||||||||||||| |||| ||||| ||||||| | ||| ||| ||||
seq2  GGCTTGCTGTAAACTGTCTTTAATAGTGGTGGAGGGATTATTCAGTTTTT  797

seq1  ACCCCTAGTTTCTTCAGGACTGTTATTTTG-AAAGAATCTTAAACTTAGG  840
      ||| ||||||||||||||| |  ||||||| ||||||| | |||||||||
seq2  ACCTCTAGTTTCTTCAGGA-TCGTATTTTGAAAAGAATTTAAAACTTAGG  846

seq1  CAGTTTCTGCAGCAAAGTGGTAGTAAAGCACATCTTTAATCCCAGCAGGT  890
      ||||||||||||||||||||||||||||   ||||||||| ||||||| |
seq2  CAGTTTCTGCAGCAAAGTGGTAGTAAAGACAATCTTTAAT-CCAGCAGCT  895

seq1  GGGAAGCAGAGGAAGTTGGATCTCTGTGAGTTCAAGGCCATCCTGGTCTA  940
      ||  ||||||| |   |||||| || ||||||||  | ||||   |||||
seq2  GG--AGCAGAGCA--GTGGATC-CT-TGAGTTCA--GTCATC--TGTCTA  935

seq1  CAGAATGAGATCCAAGACTGCCTAGACTACACAGAGAAACCCTGTCTCAA  990
      ||| ||||||||  |||||||   |||||||||||||   ||||||||||
seq2  CAG-ATGAGATC--AGACTGC--TGACTACACAGAGA---CCTGTCTCAA  977

seq1  A--AAACCA  997
      |  ||||||
seq2  ATCAAACCA  986

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Alignment Information