BAC Information

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BAC

Clone NameB6Ng01-046A07
ChromosomeX (Build37)
Map Location 32,164,667 - 32,165,670
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100040585, LOC100039362, LOC100040606, LOC100040612, LOC673784, LOC100040650, LOC100040662, LOC100039419, LOC100039429, LOC100040698, LOC630028, LOC100040722, LOC100040732, LOC100040743, LOC385298, LOC100039460, LOC100040781
Downstream geneLOC100039515, LOC100039522, LOC100039473, LOC100039550, LOC100039557, LOC100039573, EG665074, LOC100039585, LOC100039497
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-046A07.bB6Ng01-046A07.g
ACCDH871305DH871306
length1,2191,044
definitionDH871305|Mus musculus domesticus DNA, BAC clone: B6Ng01-046A07, 5' end.DH871306|Mus musculus domesticus DNA, BAC clone: B6Ng01-046A07, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaccgccataaatcaaatcatgggttcccccacgcctctcagagc
cctcccctggctgctcccatgcactcgagtgggtcagcacagtgccctcg
ctttctgccctaagaagcagtccctgcacccagctctgagattgctaaag
gcacagtctgaggaccaaggacctacagctgggacccggagccgacaagc
ccagagtcccccagcagatgaagctcctgacaccacttctgccttttcct
ttgtgagctgtgggtaacccgcccacagacaggcagtctctgcagaccct
tcaatattcgcctttctcatcggctgatctgtacaattagaacactgggt
tccctctggaccggccagattagaactacaacacggcacaaggtaaggag
aggttgacagtttactggccgggctctagtctaaagggagcgatgagacg
ccccaccaatttggctaaggtaagagaagtgatgcagggccttacagagc
ccccatctgtttttctagaaagactgatagaagcttatagatactatact
ccttttaacccgacctctgagggttaacaagccgcagttgctatggcttt
taaagattacatgccatggctttacaagatttagttaaggaggcacagaa
ggtgtatcccaagggaaaataagagggaaagaagacaggagaggaattta
agcaggattttggcctcagtagtaggggaacgtaaagaaaggaacaggcc
agagaatagatatacagggtacctgggcaacaaggaacccagacctaaaa
gaagatctgtccagaagattttagagaaggaccaatgtgcctattgcaag
gaaaaaggacattgggcatgagaatgcccaaagaaaagggaagggcccct
aagtctgactctgaaagatgataataggggagatggggctcagcccctcc
ctgagctaggtaaccctgatgtgaagagactcccgtgacttttatgacca
gggcagaacatctgtgtgaacatccactgaaaattaaaataaagatctat
tgatggaacactggtcagaacatatcctggacactgccatgcactgtgga
tctgggaaggcaagtaccatcttctggcattcctgagttcccaccgcttc
gaaggatttctgacattaagctcgattgaattccgaagccgagtacttgg
aatctccacctggagctat
gaattcactgacagaaaggaaaggtggtgctcaaagtctcagggcagttc
tacaatgcataggcaagcaataccatttaaatggagagatttaaaaaaaa
tcatttcttcacccataaaccagaaccaattattcaatatagccaagtaa
catgttttattagagttatttctgaattagatcattgaacaggattctaa
cctagataacaaattttatctaaaacattttctagaccaaaaagcatgct
ttgagccctccttaaataaaaaggcccatagtgtatgaaactaatcaacc
atagatcctatatttactccaccaatcctcaggacagtttacgctctttg
ttctagttgggattttatttatgtgaacagacatcatgaccatggcaagt
attataaaggacaacatttaattggggccggcttacaggttcagaggttc
aggccattatcattgtattagtcattgtattagtctggagccccttcaag
atctaacacaaaagcctatcactcctgtgtcaagatccaaaccaaaggca
cattgtcttcatgcttcaatatcgggctcacaggtttgccctccatttct
agattgaagttcattgcaaatatactcaagttgacaaccaagaatagtca
tcacaatgtgtatggagagagtaaacatccttatattcctctgtttagtg
aaattgcttagagtttttctccatttaaattgatattggctatatatagg
cttgctgtaaactgcctttatagtgtggaggtatatccagttttacccct
agtttcttcaggaccgttattttgaaagaattttaaacttaggcagtttc
tgcagcaaagtggtagtaaagcacatctttaatcccagcagctgggaagc
agaggcagttggatctctgtgagttcaagccatcctggtctacagaatga
gatccagactgcctggactacacagagaaccctgtctcaaaaccaaaacc
aatgaataaacaacacatttttttttctgcatctatgaatgatc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_32164667_32165670
seq2: B6Ng01-046A07.g_65_1066

seq1  GAATTCACTGACAGAAAGGAAAGGTGATGCTCAAAGTCTCAGGGCAGTGC  50
      |||||||||||||||||||||||||| ||||||||||||||||||||| |
seq2  GAATTCACTGACAGAAAGGAAAGGTGGTGCTCAAAGTCTCAGGGCAGTTC  50

seq1  TGCAATGCATAGGCAAGCAATACCATTTAAATGGAGAGATTTAAAAAAAA  100
      | |||||||||||||||||||||||||||||||||||||||| |||||||
seq2  TACAATGCATAGGCAAGCAATACCATTTAAATGGAGAGATTT-AAAAAAA  99

seq1  ATCATTTCTTCACCCATAAACCAGAACCAATTATTCAATATGGCCAAGTA  150
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  ATCATTTCTTCACCCATAAACCAGAACCAATTATTCAATATAGCCAAGTA  149

seq1  CCATGTTTTATTAGAGTTATTTCTGAATTAGATCATTGAACAGGATTCTA  200
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGTTTTATTAGAGTTATTTCTGAATTAGATCATTGAACAGGATTCTA  199

seq1  TCCTAAATAACAAATTTTATCTAAAACATTTTCTAGACCAAAAAGCATGC  250
       |||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTAGATAACAAATTTTATCTAAAACATTTTCTAGACCAAAAAGCATGC  249

seq1  TTTGAGCCCTCCTTAAATAAAAAGGCCCATAGTGTATGAAACTAATCAAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAGCCCTCCTTAAATAAAAAGGCCCATAGTGTATGAAACTAATCAAC  299

seq1  CATAGATCCTATATTTACTCCACCAATCCTCAGGACAGTTTATGCTCTTT  350
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  CATAGATCCTATATTTACTCCACCAATCCTCAGGACAGTTTACGCTCTTT  349

seq1  GTCCTAGTTGGGATTTTATTTATGTGAACAGACATCATGACCATGGCAAG  400
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTAGTTGGGATTTTATTTATGTGAACAGACATCATGACCATGGCAAG  399

seq1  TATTATAAAGGACAATATTTAATTGGGGCCGGCTTAAAGGTTCAGAGGTT  450
      ||||||||||||||| |||||||||||||||||||| |||||||||||||
seq2  TATTATAAAGGACAACATTTAATTGGGGCCGGCTTACAGGTTCAGAGGTT  449

seq1  CAGGCCATTATCATTGTATTAGTCAGTG---TTCTCTGGAGCCCCTTCAA  497
      ||||||||||||||||||||||||| ||   |  ||||||||||||||||
seq2  CAGGCCATTATCATTGTATTAGTCATTGTATTAGTCTGGAGCCCCTTCAA  499

seq1  GATCTAACACAAAAGCCTATGACTCCAGTGTCAAGATCCAAACCAAAGGC  547
      |||||||||||||||||||| ||||| |||||||||||||||||||||||
seq2  GATCTAACACAAAAGCCTATCACTCCTGTGTCAAGATCCAAACCAAAGGC  549

seq1  ACATTATCTTCATGCTTCAATATCGGGCTCACAGGTTTGCCCTCCATTTC  597
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTGTCTTCATGCTTCAATATCGGGCTCACAGGTTTGCCCTCCATTTC  599

seq1  TAGATTCAAGTTCATTGCAAATATACTCAAGTTGGCAACCAAGAATAGTC  647
      |||||| ||||||||||||||||||||||||||| |||||||||||||||
seq2  TAGATTGAAGTTCATTGCAAATATACTCAAGTTGACAACCAAGAATAGTC  649

seq1  ATCACAATGTGTAAGGAGAGAGTAAACATCCTTATATTCCTCTGTTTAGT  697
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  ATCACAATGTGTATGGAGAGAGTAAACATCCTTATATTCCTCTGTTTAGT  699

seq1  GAAATTGCTTAGAGTTTTTCTCCATTTAAATTGATATTGGCTATATATAG  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATTGCTTAGAGTTTTTCTCCATTTAAATTGATATTGGCTATATATAG  749

seq1  GCTTGCTGTAAACTGCCTTTATAGTGTGGAGGTATATCCAGTTTTACCCC  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGCTGTAAACTGCCTTTATAGTGTGGAGGTATATCCAGTTTTACCCC  799

seq1  TAGTTTCTTCAGGACTGTTATTTTGAAAGAATTTTAAACTTAGGCAGTTT  847
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  TAGTTTCTTCAGGACCGTTATTTTGAAAGAATTTTAAACTTAGGCAGTTT  849

seq1  GTGCAGCAAAGTGGTAGTAAAGCACATCTTTAATCCCAGCAGCTGGGAAG  897
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCAGCAAAGTGGTAGTAAAGCACATCTTTAATCCCAGCAGCTGGGAAG  899

seq1  CAGAGGCAGTTGGATCTCTGTGAGTTCAAGGCCATCCTGGTCTACAGAAT  947
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  CAGAGGCAGTTGGATCTCTGTGAGTTCAA-GCCATCCTGGTCTACAGAAT  948

seq1  GAGATCCAAGACTGCCTGGACTACACAGAGAAACCCTGTCTCAAAAACCA  997
      ||||||| |||||||||||||||||||||| ||||||||||| |||||||
seq2  GAGATCC-AGACTGCCTGGACTACACAGAG-AACCCTGTCTC-AAAACCA  995

seq1  AAACCAA  1004
      |||||||
seq2  AAACCAA  1002