BAC Information

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BAC

Clone NameB6Ng01-047J04
ChromosomeX (Build37)
Map Location 109,660,699 - 109,661,376
singlet/doubletsinglet
Overlap gene2010106E10Rik
Upstream geneEG664791, D030011N01Rik, LOC100038989, Tex16, LOC622570, 4933403O08Rik, EG385407, Apool, Satl1, EG623341
Downstream geneZfp711, Pof1b, LOC623412, EG623428, LOC100039112, Chm, EG664918, Dach2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-047J04.bB6Ng01-047J04.g
ACCDH872398DH872399
length1,016678
definitionDH872398|Mus musculus domesticus DNA, BAC clone: B6Ng01-047J04, 5' end.DH872399|Mus musculus domesticus DNA, BAC clone: B6Ng01-047J04, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctattgagtatttttgtatcaatattcataagtgaaattgatctg
aagttctctttctttgttgggtctttgtgtggtttaggtatcagagtaat
tatggcttcatagaataagtcaggtaatgttccttctgtttctatttaat
ggaatagttagaggtggtttggctcttctttgaaggcctggtagaattct
gttttaaagtcatctgggcctggactttttttttttttaatgggactgtt
tatatagtttgttgcagcctgatttaactttggcacatagtatctgtcta
gataatcatccatttcatctagatttttcagtttggttgagtaaaggctt
ttgtagtaagatctgatgattttttaaatttcctcattttctgttgttat
gtctccctttccatttctgattttttaaatttagatcctctctctattcc
cattagttagtttgggtaagggttaatgtatcttgttgattttctcaatg
aagcagttcctgattttgttgattctttgcattgttatcttagtttctac
tcggttaatttcagccctgagttggactatttcctgttattgtctcctct
tgggagtgtgtgcttctttttgttctagagctctcacctgtgatgttaag
tcaatattataggatctcaccaatttttttaagaaggcactttggcacta
tgaattttcctcttaacactgctttcattgtgtcccataagtttgggtat
gttgtgccttcattttcactgaattctagaaagtctttagtttctttatt
atttcttccctgacccagtatcactgagtagagagtgttccacttccatg
tgtatgtgggttttctatgtttgttgttatgacatctgctagtacatgtg
atctgatagatgcatgcatattcaatcttttgcatcatgagctgtaatga
tctattaatggttattgagaagtatatgatgctggaaggagtaatttctt
ttgagaggggggtgac
gaattctctctgaccacagtcaagaaaaaaaaatgagtatttcagtcatt
ggccaaaactttttccctctctctcaaatcgaaattacactcacatgagt
gtattcatgcatgcacttgcccacataaatatgtgctatgtatgtattgt
aaggtccattaaaatacagtcacctctgtttgctttctgtgctacacccc
tagggtactttagagtagaaagaatgaatgaatgtaccaaaggtacacac
tttataactgttgtgttaattaagtgcctcatcttattcatgttacaatt
tcttctactacataacacctaataaagagactatgtatcttgggttttta
aaagagacaggacaaatttcatgtaattgttttcagtaatagaagtcaag
gacccatgtggttgaattagggaaaggctggaagaagctgaggaagaagg
agaccccgtaggaagaccagcagactcaactaacctggacccctgagatc
tctcagacactgaaataccaactaggcagcatgcagtagctggtctgagg
tccctgtcacatatacagtaaagaactgcctggtcaggcatcagtgaggg
gaaaaaggggcctaacgcttgaaagatttgaggccctagggagtggggag
ttcttgtgggatggaggtgtgtggtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_109660699_109661376
seq2: B6Ng01-047J04.g_67_744 (reverse)

seq1  CACACCACACACCTCCATCCCACAAGAACTCCCCACTCCCTAGGGCCTCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACCACACACCTCCATCCCACAAGAACTCCCCACTCCCTAGGGCCTCA  50

seq1  AATCTTTCAAGCGTTAGGCCCCTTTTTCCCCTCACTGATGCCTGACCAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTTTCAAGCGTTAGGCCCCTTTTTCCCCTCACTGATGCCTGACCAGG  100

seq1  CAGTTCTTTACTGTATATGTGACAGGGACCTCAGACCAGCTACTGCATGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTCTTTACTGTATATGTGACAGGGACCTCAGACCAGCTACTGCATGC  150

seq1  TGCCTAGTTGGTATTTCAGTGTCTGAGAGATCTCAGGGGTCCAGGTTAGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTAGTTGGTATTTCAGTGTCTGAGAGATCTCAGGGGTCCAGGTTAGT  200

seq1  TGAGTCTGCTGGTCTTCCTACGGGGTCTCCTTCTTCCTCAGCTTCTTCCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTCTGCTGGTCTTCCTACGGGGTCTCCTTCTTCCTCAGCTTCTTCCA  250

seq1  GCCTTTCCCTAATTCAACCACATGGGTCCTTGACTTCTATTACTGAAAAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTTCCCTAATTCAACCACATGGGTCCTTGACTTCTATTACTGAAAAC  300

seq1  AATTACATGAAATTTGTCCTGTCTCTTTTAAAAACCCAAGATACATAGTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTACATGAAATTTGTCCTGTCTCTTTTAAAAACCCAAGATACATAGTC  350

seq1  TCTTTATTAGGTGTTATGTAGTAGAAGAAATTGTAACATGAATAAGATGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTATTAGGTGTTATGTAGTAGAAGAAATTGTAACATGAATAAGATGA  400

seq1  GGCACTTAATTAACACAACAGTTATAAAGTGTGTACCTTTGGTACATTCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCACTTAATTAACACAACAGTTATAAAGTGTGTACCTTTGGTACATTCA  450

seq1  TTCATTCTTTCTACTCTAAAGTACCCTAGGGGTGTAGCACAGAAAGCAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATTCTTTCTACTCTAAAGTACCCTAGGGGTGTAGCACAGAAAGCAAA  500

seq1  CAGAGGTGACTGTATTTTAATGGACCTTACAATACATACATAGCACATAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGGTGACTGTATTTTAATGGACCTTACAATACATACATAGCACATAT  550

seq1  TTATGTGGGCAAGTGCATGCATGAATACACTCATGTGAGTGTAATTTCGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGTGGGCAAGTGCATGCATGAATACACTCATGTGAGTGTAATTTCGA  600

seq1  TTTGAGAGAGAGGGAAAAAGTTTTGGCCAATGACTGAAATACTCATTTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAGAGAGAGGGAAAAAGTTTTGGCCAATGACTGAAATACTCATTTTT  650

seq1  TTTTCTTGACTGTGGTCAGAGAGAATTC  678
      ||||||||||||||||||||||||||||
seq2  TTTTCTTGACTGTGGTCAGAGAGAATTC  678