BAC Information

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BAC

Clone NameB6Ng01-048G08
ChromosomeX (Build37)
Map Location 63,926,070 - 63,927,120
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC671840, Slitrk2
Downstream geneLOC666824, LOC627734, EG666828
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-048G08.bB6Ng01-048G08.g
ACCDH872967DH872968
length1,2141,047
definitionDH872967|Mus musculus domesticus DNA, BAC clone: B6Ng01-048G08, 5' end.DH872968|Mus musculus domesticus DNA, BAC clone: B6Ng01-048G08, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcagtgaaagtgctaacacaccatatccatttcttatgggacacaa
tgaaagcagtgctaagagaaaggttcatagcactaagtgccctggtaaag
aaactggagagatctatgctaacaacttaatagcacacctgagagctcta
gacaaaaagaagcaaaatcacccaagaggagtagaaggcaggaaatagtc
aaattcaggaccaaaggcaagcaaatagaaacaaagaaaacaatacaaat
aatcagcataaccaaaagcaagtactttgagagaatcaacaagatagata
aacccctagccaaactaactaaagggccaagaggcagtatccaaattaat
aaaatcagaaatgaaaagggaggcataacggaaacagaggagattcaaaa
agtcctcagatcttactataaaagtctatattcagcaaaactggaaaatc
tagatgaaatggatggttttctaaacagatgccacataccaaagttaagt
caagagcaggtaaattatttaaacagacccatatcacacatggaaagaga
agaagttatattccaaccataaaaagtccaaggccagatggatttagtgc
aaattctaccagacctgcaaagaagacctaataccaacactcctcaaact
attccataaaatagaaacagaagtaacactacctaacacattctattaag
ccacaattactctaatacatagaccatacaaggacccaaccaaaaagaga
acttcagaccaatcatatttatgaatatcaatgcaaaaatactcaataaa
attcttgcaaaccaaatcccaaacacattaaaaccatcattcaacatgat
aaagtaggcttcatcccatggatgcaagtttagtttaatatacaaaaatc
cattaacgtaatccactataataaacaaactaaaagaaaaaaaaattgac
tgatcatctcctttaatcctagtggatcaggaactttcacataaaaccag
agaaatctgaaacttataggaggagaaagtggggaaagccttgaagattg
gcacacggaaaattctaacgaaagcatggcttgctgtagatcgagatgca
aatggaacctattgaacttcagatcctgcaggcaagtcctggtcttatga
caaaagtctcacagactggagagcatcttcatctatcttactcagatggg
atcatatctactaa
gaattccataagaacacttaagtgaaagccataatgtgtatgcaaaggac
ccttaaaagtaatttggtttcacagtgagcttcctttggaagaatctaaa
tttttatttgcaaataattatcaagtggaggttgcagctgggatagctat
gatggtacgtctacttcttctttcagctctaggaccccatttggtataga
cccttgaaggttgtccatgctgcctcagtctctgtgagtttatatgtgca
ttgatcatgctgctttagtgggccttgttttcttggtatcctccaattcc
actggctcttacactctttctgcctcctcctctgcagggctccttaagcc
ctggtgggagggatttagtggcttgaggcatacacagattcttacttagg
tgtttctgcatacaacatgaattaatacaagcaaaacaattataatattt
tgtggtacaaataaatactatataattatttattgacttaaaagaattag
catgttttcttcatggtcaaatcataacaaggatgaaatgagaattacat
gttaaaattaatccaggaagaggaacaaataatgagagcaagtaaagaca
gtgttttatgaatcagacaaaagagaaaggaacctaagcaagatgtggaa
gccagcaccagctgaagaaaactatatagagacatctggataccttttgc
taccacattttgaatagaaggaatcctgaaaagagtcatgtaatgacaaa
ctaaaatgttactgggcttttaagatccaaatgccaaagggctgcgatgt
tcctggtagtgaatgcttatctagcaggtacaaggccttgtagtcaatct
cagcactgaaagaaatgcaaaattgatttgcctgtttcttaactttctct
ggaaagcaggaaatttccagttttgtttataagctagacaggttttcacc
tttatttaacacaactttttagaactaccctcattgtttgaaattaattt
ggaagatacctttcatcctatgattgtaatggctggtctttcaaggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_63926070_63927120
seq2: B6Ng01-048G08.g_68_1107 (reverse)

seq1  AAGACACAGCCATTAACAAATCATAAGGATGGAAGGTATCTTCCAAATTA  50
      ||||| |||||||||   |||||| |||||| ||||||||||||||||||
seq2  AAGAC-CAGCCATTA--CAATCAT-AGGATGAAAGGTATCTTCCAAATTA  46

seq1  ATTTTCAAACAATGAGGGTTAAGTCTAAAAAGTTGTGTTAAATAAAAGTG  100
      | |||||||||||||||| ||  ||||||||||||||||||||||| || 
seq2  A-TTTCAAACAATGAGGG-TAGTTCTAAAAAGTTGTGTTAAATAAAGGT-  93

seq1  GAAAACCTGTCTAGCTTATAAACAAAACTGGGAATTGTCCTGCTCTCCAG  150
      ||||||||||||||||||||||||||||||| |||| ||||||| |||| 
seq2  GAAAACCTGTCTAGCTTATAAACAAAACTGGAAATT-TCCTGCTTTCCA-  141

seq1  GAGAAGGTTAGGAGACAGGCAAATCATTTTTGCATTTTCTTTCAGTGCTG  200
      ||||| |||| || |||||||||||| ||||||| |||||||||||||| 
seq2  GAGAAAGTTAAGAAACAGGCAAATCAATTTTGCA-TTTCTTTCAGTGCT-  189

seq1  GAGATTGACTACAAGGCCTTGTACCTGCTAGATAAGCATTCGACTACCAA  250
      ||||||||||||||||||||||||||||||||||||||||| |||||| |
seq2  GAGATTGACTACAAGGCCTTGTACCTGCTAGATAAGCATTC-ACTACC-A  237

seq1  GGAACATCGCAGCCCTTTGGCATTTGGATCCTAAAAGCCCAGTAACATTT  300
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  GGAACATCGCAGCCCTTTGGCATTTGGATCTTAAAAGCCCAGTAACATTT  287

seq1  TAGTTTGTCATTACATGACTCTTTTCAGGATTCCTTCTATTCAAAATGTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTTGTCATTACATGACTCTTTTCAGGATTCCTTCTATTCAAAATGTG  337

seq1  GTAGCAAAAGGTATCCAGATGTCTCTATATAGTTTTCTTCAGCTGGTGCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGCAAAAGGTATCCAGATGTCTCTATATAGTTTTCTTCAGCTGGTGCT  387

seq1  GGCTTCCACATCTTGCTTAGGTTCCTTTCTCTTTTGTCTGATTCAT-AAA  449
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  GGCTTCCACATCTTGCTTAGGTTCCTTTCTCTTTTGTCTGATTCATAAAA  437

seq1  CACTGTC-TTACTTGCTCTCATTATTTGTTCCTCTTCCTGGATTAATTTT  498
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGTCTTTACTTGCTCTCATTATTTGTTCCTCTTCCTGGATTAATTTT  487

seq1  AACATGTAATTCTCATTTCATCCTTGTTATGATTTGACCATGAAGAAAAC  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATGTAATTCTCATTTCATCCTTGTTATGATTTGACCATGAAGAAAAC  537

seq1  ATGCTAATTCTTTTAAGTCAATAAATAATTATATAGTATTTATTTGTACC  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTAATTCTTTTAAGTCAATAAATAATTATATAGTATTTATTTGTACC  587

seq1  ACAAAATATTATAATTGTTTTGCTTGTATTAATTCATGTTGTATGCAGAA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAATATTATAATTGTTTTGCTTGTATTAATTCATGTTGTATGCAGAA  637

seq1  ACACCTAAGTAAGAATCTGTGTATGCCTCAAGCCACTAAATCCCTCCCAC  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACCTAAGTAAGAATCTGTGTATGCCTCAAGCCACTAAATCCCTCCCAC  687

seq1  CAGGGCTTAAGGAGCCCTGCAGAGGAGGAGGCAGAAAGAGTGTAAGAGCC  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGCTTAAGGAGCCCTGCAGAGGAGGAGGCAGAAAGAGTGTAAGAGCC  737

seq1  AGTGGAATTGGAGGATACCAAGAAAACAAGGCCCACTAAAGCAGCATGAT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGAATTGGAGGATACCAAGAAAACAAGGCCCACTAAAGCAGCATGAT  787

seq1  CAATGCACATATAAACTCACAGAGACTGAGGCAGCATGGACAACCTTCAA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGCACATATAAACTCACAGAGACTGAGGCAGCATGGACAACCTTCAA  837

seq1  GGGTCTATACCAAATGGGGTCCTAGAGCTGAAAGAAGAAGTAGACGTACC  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTCTATACCAAATGGGGTCCTAGAGCTGAAAGAAGAAGTAGACGTACC  887

seq1  ATCATAGCTATCCCAGCTGCAACCTCCACTTGATAATTATTTGCAAATAA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATAGCTATCCCAGCTGCAACCTCCACTTGATAATTATTTGCAAATAA  937

seq1  AAATTTAGATTCTTCCAAAGGAAGCTCACTGTGAAACCAAATTACTTTTA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTTAGATTCTTCCAAAGGAAGCTCACTGTGAAACCAAATTACTTTTA  987

seq1  AGGGTCCTTTGCATACACATTATGGCTTTCACTTAAGTGTTCTTATGGAA  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTCCTTTGCATACACATTATGGCTTTCACTTAAGTGTTCTTATGGAA  1037

seq1  TTC  1051
      |||
seq2  TTC  1040