MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-048I18
Chromosome	X (Build37)
Map Location	28,811,002 - 28,812,048
singlet/doublet	singlet
Overlap gene	none
Upstream gene	LOC664917, LOC100039324, LOC100039334, LOC100039096, EG664923, LOC100039364, LOC100039377, LOC100039386, LOC100039127, EG664944, LOC100039423, LOC100039145, LOC664951, LOC100042071, LOC664958
Downstream gene	LOC664964, LOC100042087, LOC100039171, LOC100042103, LOC100042109, LOC100042115, LOC100042122, LOC100042135, LOC100042144, LOC664982, LOC100039212, EG664989
Link	Open Mouse BAC browser

Click to get alignment info.

name	LOC664917 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:664917
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 61 ESTs

name	LOC100039324 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039324
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 mRNAs, 16 ESTs, 5 Proteins

name	LOC100039334 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039334
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 65 ESTs

name	LOC100039096 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039096
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs

name	EG664923 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:664923 MGI:3647245
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 ESTs, 5 Proteins pseudo : _no_value

name	LOC100039364 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039364
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 58 ESTs

name	LOC100039377 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039377
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 mRNAs, 16 ESTs, 5 Proteins

name	LOC100039386 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039386
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 65 ESTs

name	LOC100039127 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039127
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs

name	EG664944 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:664944 MGI:3647748
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 ESTs, 5 Proteins pseudo : _no_value

name	LOC100039423 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039423
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs

name	LOC100039145 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039145
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs, 5 Proteins

name	LOC664951 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:664951
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 6 ESTs, 1 Protein pseudo : _no_value

name	LOC100042071 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042071
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 93 ESTs, 1 Protein

name	LOC664958 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:664958
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 ESTs, 5 Proteins pseudo : _no_value

name	LOC664964 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:664964
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 58 ESTs

name	LOC100042087 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042087
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 ESTs, 5 Proteins pseudo : _no_value

name	LOC100039171 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039171
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs

name	LOC100042103 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042103
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 65 ESTs

name	LOC100042109 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042109
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 mRNAs, 16 ESTs, 5 Proteins

name	LOC100042115 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042115
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 59 ESTs

name	LOC100042122 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042122
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 ESTs, 5 Proteins pseudo : _no_value

name	LOC100042135 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042135
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 65 ESTs

name	LOC100042144 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042144
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 mRNAs, 16 ESTs, 5 Proteins

name	LOC664982 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:664982
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 66 ESTs

name	LOC100039212 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039212
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs

name	EG664989 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:664989 MGI:3646492
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 ESTs, 5 Proteins pseudo : _no_value

name	LOC664917 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149271365 GeneID:664917
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 61 ESTs product : hypothetical LOC664917 transcript_id : XM_973402.2

name	LOC100039324 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149271368 GeneID:100039324
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 16 ESTs, 5 Proteins product : similar to XMR, transcript variant 2 transcript_id : XM_001472858.1

name	LOC100039324 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149271366 GeneID:100039324
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 14 ESTs, 5 Proteins product : similar to XMR, transcript variant 1 transcript_id : XM_001472834.1

name	LOC100039334 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149271372 GeneID:100039334
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 64 ESTs product : hypothetical protein LOC100039334, transcript variant 1 transcript_id : XM_001472878.1

name	LOC100039334 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149271370 GeneID:100039334
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 64 ESTs product : hypothetical protein LOC100039334, transcript variant 2 transcript_id : XM_001472894.1

name	LOC100039096 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149271360 GeneID:100039096
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs product : similar to pol protein transcript_id : XM_001472254.1

name	LOC100039364 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149271375 GeneID:100039364
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 58 ESTs product : hypothetical protein LOC100039364 transcript_id : XM_001472934.1

name	LOC100039377 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149271379 GeneID:100039377
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 16 ESTs, 5 Proteins product : similar to XMR, transcript variant 2 transcript_id : XM_001472983.1

name	LOC100039377 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149271377 GeneID:100039377
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 14 ESTs, 5 Proteins product : similar to XMR, transcript variant 1 transcript_id : XM_001472953.1

name	LOC100039386 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149271383 GeneID:100039386
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 64 ESTs product : hypothetical protein LOC100039386, transcript variant 1 transcript_id : XM_001473010.1

name	LOC100039386 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149271381 GeneID:100039386
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 64 ESTs product : hypothetical protein LOC100039386, transcript variant 2 transcript_id : XM_001473034.1

name	LOC100039127 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149271362 GeneID:100039127
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs product : similar to pol protein transcript_id : XM_001472318.1

name	LOC100039423 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149271386 GeneID:100039423
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs product : hypothetical protein LOC100039423 transcript_id : XM_001473070.1

name	LOC100039145 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149271388 GeneID:100039145
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs, 5 Proteins product : similar to Xlr-related, meiosis regulated transcript_id : XM_001472346.1

name	LOC100042071 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149271393 GeneID:100042071
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 93 ESTs, 1 Protein product : similar to RIKEN cDNA 1810037I17 gene transcript_id : XM_001477220.1

name	LOC664964 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149271395 GeneID:664964
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 58 ESTs product : hypothetical LOC664964 transcript_id : XM_973681.2

name	LOC100039171 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149271390 GeneID:100039171
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs product : similar to pol protein transcript_id : XM_001472388.1

name	LOC100042103 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149271399 GeneID:100042103
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 64 ESTs product : hypothetical protein LOC100042103, transcript variant 1 transcript_id : XM_001477265.1

name	LOC100042103 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149271397 GeneID:100042103
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 64 ESTs product : hypothetical protein LOC100042103, transcript variant 2 transcript_id : XM_001477280.1

name	LOC100042109 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149271403 GeneID:100042109
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 16 ESTs, 5 Proteins product : similar to Sycp3 like X-linked, transcript variant 2 transcript_id : XM_001477327.1

name	LOC100042109 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149271401 GeneID:100042109
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 14 ESTs, 5 Proteins product : similar to Sycp3 like X-linked, transcript variant 1 transcript_id : XM_001477305.1

name	LOC100042115 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149271405 GeneID:100042115
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 59 ESTs product : hypothetical protein LOC100042115 transcript_id : XM_001477343.1

name	LOC100042135 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149271410 GeneID:100042135
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 60 ESTs product : hypothetical protein LOC100042135, transcript variant 1 transcript_id : XM_001477363.1

name	LOC100042135 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149271408 GeneID:100042135
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 ESTs product : hypothetical protein LOC100042135, transcript variant 2 transcript_id : XM_001477384.1

name	LOC100042144 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149271414 GeneID:100042144
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 16 ESTs, 5 Proteins product : similar to XMR, transcript variant 2 transcript_id : XM_001477423.1

name	LOC100042144 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149271412 GeneID:100042144
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 14 ESTs, 5 Proteins product : similar to XMR, transcript variant 1 transcript_id : XM_001477404.1

name	LOC664982 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149271416 GeneID:664982
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 66 ESTs product : hypothetical LOC664982 transcript_id : XM_973856.2

name	LOC100039212 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149271417 GeneID:100039212
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs product : similar to pol protein transcript_id : XM_001472463.1

name	LOC664917 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:94407245 GeneID:664917
definition	codon_start : 1 product : hypothetical protein protein_id : XP_978496.1

name	LOC100039324 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149271367 GeneID:100039324
definition	codon_start : 1 product : similar to XMR isoform 1 protein_id : XP_001472884.1

name	LOC100039324 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149271369 GeneID:100039324
definition	codon_start : 1 product : similar to XMR isoform 2 protein_id : XP_001472908.1

name	LOC100039334 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149271371 GeneID:100039334
definition	codon_start : 1 product : hypothetical protein isoform 2 protein_id : XP_001472944.1

name	LOC100039334 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149271373 GeneID:100039334
definition	codon_start : 1 product : hypothetical protein isoform 1 protein_id : XP_001472928.1

name	LOC100039096 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149271361 GeneID:100039096
definition	codon_start : 1 product : similar to pol protein protein_id : XP_001472304.1

name	LOC100039364 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149271376 GeneID:100039364
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001472984.1

name	LOC100039377 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149271378 GeneID:100039377
definition	codon_start : 1 product : similar to XMR isoform 1 protein_id : XP_001473003.1

name	LOC100039377 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149271380 GeneID:100039377
definition	codon_start : 1 product : similar to XMR isoform 2 protein_id : XP_001473033.1

name	LOC100039386 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149271382 GeneID:100039386
definition	codon_start : 1 product : hypothetical protein isoform 2 protein_id : XP_001473084.1

name	LOC100039386 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149271384 GeneID:100039386
definition	codon_start : 1 product : hypothetical protein isoform 1 protein_id : XP_001473060.1

name	LOC100039127 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149271363 GeneID:100039127
definition	codon_start : 1 product : similar to pol protein protein_id : XP_001472368.1

name	LOC100039423 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149271387 GeneID:100039423
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001473120.1

name	LOC100039145 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149271389 GeneID:100039145
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001472396.1

name	LOC100042071 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149271394 GeneID:100042071
definition	codon_start : 1 product : similar to RIKEN cDNA 1810037I17 gene protein_id : XP_001477270.1

name	LOC664964 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:94407253 GeneID:664964
definition	codon_start : 1 product : hypothetical protein protein_id : XP_978775.1

name	LOC100039171 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149271391 GeneID:100039171
definition	codon_start : 1 product : similar to pol protein protein_id : XP_001472438.1

name	LOC100042103 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149271398 GeneID:100042103
definition	codon_start : 1 product : hypothetical protein isoform 2 protein_id : XP_001477330.1

name	LOC100042103 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149271400 GeneID:100042103
definition	codon_start : 1 product : hypothetical protein isoform 1 protein_id : XP_001477315.1

name	LOC100042109 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149271402 GeneID:100042109
definition	codon_start : 1 product : similar to Sycp3 like X-linked isoform 1 protein_id : XP_001477355.1

name	LOC100042109 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149271404 GeneID:100042109
definition	codon_start : 1 product : similar to Sycp3 like X-linked isoform 2 protein_id : XP_001477377.1

name	LOC100042115 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149271406 GeneID:100042115
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001477393.1

name	LOC100042135 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149271409 GeneID:100042135
definition	codon_start : 1 product : hypothetical protein isoform 2 protein_id : XP_001477434.1

name	LOC100042135 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149271411 GeneID:100042135
definition	codon_start : 1 product : hypothetical protein isoform 1 protein_id : XP_001477413.1

name	LOC100042144 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149271413 GeneID:100042144
definition	codon_start : 1 product : similar to XMR isoform 1 protein_id : XP_001477454.1

name	LOC100042144 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149271415 GeneID:100042144
definition	codon_start : 1 product : similar to XMR isoform 2 protein_id : XP_001477473.1

name	LOC664982 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:94407259 GeneID:664982
definition	codon_start : 1 product : hypothetical protein protein_id : XP_978950.1

name	LOC100039212 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149271418 GeneID:100039212
definition	codon_start : 1 product : similar to pol protein protein_id : XP_001472513.1

name	LOC664958 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:664958
definition	number : 9 pseudo : _no_value

name	LOC664958 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:664958
definition	number : 8 pseudo : _no_value

name	LOC664958 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:664958
definition	number : 7 pseudo : _no_value

name	LOC664958 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:664958
definition	number : 6 pseudo : _no_value

name	LOC664958 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:664958
definition	number : 5 pseudo : _no_value

name	LOC664958 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:664958
definition	number : 4 pseudo : _no_value

name	LOC664958 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:664958
definition	number : 3 pseudo : _no_value

name	LOC664958 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:664958
definition	number : 2 pseudo : _no_value

name	LOC664958 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:664958
definition	number : 1 pseudo : _no_value

name	EG664923 (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149271374 GeneID:664923 MGI:3647245
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 ESTs, 5 Proteins product : predicted gene, EG664923 pseudo : _no_value transcript_id : XR_035656.1

name	EG664944 (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149271385 GeneID:664944 MGI:3647748
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 ESTs, 5 Proteins product : predicted gene, EG664944 pseudo : _no_value transcript_id : XR_035657.1

name	LOC664951 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149271392 GeneID:664951
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 6 ESTs, 1 Protein product : hypothetical LOC664951 pseudo : _no_value transcript_id : XR_033120.1

name	LOC100042087 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149271396 GeneID:100042087
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 ESTs, 5 Proteins product : similar to XMR pseudo : _no_value transcript_id : XR_033154.1

name	LOC100042122 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149271407 GeneID:100042122
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 ESTs, 5 Proteins product : similar to XMR pseudo : _no_value transcript_id : XR_033191.1

name	EG664989 (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149271421 GeneID:664989 MGI:3646492
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 ESTs, 5 Proteins product : predicted gene, EG664989 pseudo : _no_value transcript_id : XR_035658.1

clone name	MSMg01-195O18
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-055B17
singlet/doublet	singlet
plural/unique	plural

clone name	B6Ng01-324D22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-205J13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-308K17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-179K08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-269L14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-156O20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-147A19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-234B08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-184J18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-101N01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-052E21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-245C20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-048I18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-009O19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-015K01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-107A21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-322H03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-149N09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-045M06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-290H14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-338O07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-347J23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-198E03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-075I19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-229C13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-121C19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-122B17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-116P12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-198J21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-066E23
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-048I18.b	B6Ng01-048I18.g
ACC	DH873073	DH873074
length	1,038	1,191
definition	DH873073\|Mus musculus domesticus DNA, BAC clone: B6Ng01-048I18, 5' end.	DH873074\|Mus musculus domesticus DNA, BAC clone: B6Ng01-048I18, 3' end.
singlet/doublet	singlet	---
BLAST hit	unique	no hit data
sequence	gaattccatcaaatctccaaactcacaagttatcaatgagtagtccactg attcctatgtctttctgtggtgctttttaacaattggaaaagattgacaa tccatgtgtaatctctatcaatcatggtctaatctctcagtaagcaaaat gcatgagtggtatttggatactcagtctttatccactactatctttttac cttctatttttattttataccaaccccaattccccttctagcttttgcac cagtcacaatgtattatgatgcaatcctcctaaggccaatgatactcagg cttttatgtctccaggaacacacaattttaactgtttggtcttttgttac cttatctgcctaaaaattaataatcattatttcatatcaattggttctat ttatacacacactgtgcatatatgttatgtgattattattaaaaaaggca tattttttatattttcaaaggactctgttggataaaggtgaagattagat tcccccagaaatgatcttgtatgacacagtagaaatatactgagacttca atgtctccagctgtgccaaccaagttctctttcacacatagtctgtcttt ctatgtttccaaaatattttcatattcttttttcattggtcctttttttc ctttgttctgagatccagtgaagtcagaaaaatgttatttttcatcttta tttaaagagcatattattattattaccattatcattgttttatttacatc tcaaatactgtcctgctcctgcacccccttgcacagttcttcaccttatt ccctctcactttgcctctgagatgggtatcaccatgggcattcccccttc cctgggtccgcaactctacaaggattaggcagaaacctctcccactaagg ccagtcaaggcagtcaatgctaacattatattttggttgcctcagaccag actatttcctctttgattggtgactagtcttaggagctccagtgtaccac attagtgacactgtgtctcatgtgcacccttcagtttt	gaattcaaggcccatacctaaacataataagagcaagagacagcaaacca gtagccaacatcaaactaaatggtgagaaacttgaagcaatcctactaaa atcagggactagacaaggttgcccactttctccctacttattcaacatag tacttgaagtcctagccagaacaaatcaacaacaaaaggaaaacaaatga atacaaattgggaagatggcaaaatatcactatttccataagatatgata gcatgtatccgtgaccccaaaaattacactagataaatcctaaacctgat acacaacttcagtgcagtagctgaatataaaattaactcaaacatgtcag tggcctttccctacacaaagaataaagaggatgagaaagaaattagggat acaacacaattcacaacagtcaaaaaatataaaatacgttggtgtgactg taattaaggaagtgaaaagtctgtatgacaagaacttcaagtctctgaag aaagaaattgaagaactcagaaggtaaaatgatctcccatactcatggat tggcagggttaatatagtaaaaatgtctatttgccgaacaaaatctacat attcaatgcaatattcatcaaaattataactcaattcttcactgagttag aaaaggcaatttgcaaattcatctggaataacaaaacaaaacaaaacaga caaaaaacaaaaacaaaaactaggatagcaaaactatttcataataaaga acttctgggggaaacacaatggctgacctcaagcttgtaccacagaacaa ttgtgataaaaactgcatggtactggtaccgccacagacaggtagatcaa tggatttagaattgaatgcacagaaatgaatccaccctgaaattctacct ccaccagtcaaatggcttagatcaaaaatcagtaacagcagatgctggcc aggatgttggaaaagagaaccctccaccatgttgggttgcaagctgtcac tctggaatcagtctgcagttcctcaaaaaatccgacatagtactaccgaa gatcatgcaatttcctctctggcatatatccgaagatgttccaccaatag aaggtaacgtgctcccattgtttctaaagcttttataaataccgaagccg tgaatgaccccaatatctttccaccacgaaatgatacgaag
quality values	Open. 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Hide. 50 47 52 49 55 49 15 12 13 27 25 25 12 11 19 10 11 49 52 45 59 59 59 43 61 41 59 59 59 52 52 59 59 59 59 59 59 61 59 59 61 61 61 61 59 59 61 61 61 59 52 59 59 23 39 38 24 26 31 33 61 59 52 59 59 59 59 59 59 59 59 61 61 59 61 59 59 61 61 61 61 61 59 59 35 55 49 59 52 52 59 59 59 59 59 59 55 55 55 59 59 59 59 43 49 59 59 59 59 61 59 44 59 59 59 61 59 61 59 59 59 59 59 59 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 59 61 61 59 61 59 52 59 59 61 61 61 61 61 59 59 61 59 55 61 61 52 59 59 59 59 61 59 59 52 52 59 59 59 49 49 59 49 59 61 59 59 61 59 59 61 61 61 61 61 59 59 59 59 59 61 61 61 61 59 61 52 59 59 61 59 59 59 55 61 61 59 59 59 61 61 59 59 61 61 61 61 59 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 59 59 59 59 59 59 52 59 59 61 61 61 59 61 61 61 59 61 61 61 61 61 61 61 52 59 59 59 55 59 59 61 61 59 61 61 61 59 61 59 59 61 61 61 59 61 59 61 59 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 59 61 61 61 61 61 61 61 61 61 61 59 61 55 55 55 61 61 61 61 61 55 61 61 55 61 61 61 61 61 55 55 61 61 55 61 61 61 61 61 61 61 61 61 61 55 61 55 61 61 61 61 55 55 52 52 52 52 61 61 61 61 55 61 61 47 61 61 61 50 61 55 55 55 50 49 29 55 55 61 55 55 61 61 55 61 55 55 55 55 61 61 61 55 55 55 55 55 43 55 61 61 47 61 61 61 61 61 52 61 61 53 61 61 61 61 61 47 43 61 61 61 61 61 61 61 61 61 46 61 61 53 61 53 43 43 43 61 61 43 61 61 47 61 61 61 61 61 61 53 53 61 61 61 61 53 61 61 61 45 45 61 61 61 61 61 61 61 47 35 61 43 61 61 53 57 53 53 57 53 50 57 57 53 53 57 57 34 30 57 53 53 57 53 57 53 50 42 42 19 10 34 22 30 57 33 45 53 53 53 53 57 52 52 57 53 53 57 53 45 53 52 57 57 47 38 52 47 47 18 17 41 53 52 41 40 27 57 53 43 28 21 53 53 36 52 33 37 45 38 57 57 57 31 34 43 33 38 52 33 29 57 57 39 53 43 14 47 46 53 42 57 57 50 45 53 41 33 35 38 53 48 53 50 38 28 41 47 52 38 41 37 37 29 34 52 52 36 53 53 25 46 57 12 18 43 35 42 37 53 39 53 50 24 46 32 37 53 25 39 28 28 48 38 35 29 23 33 29 37 33 53 57 53 52 27 52 16 40 12 13 57 53 47 36 37 57 28 32 48 40 26 41 52 42 53 53 33 27 26 25 10 30 39 39 44 33 57 30 44 44 26 17 14 23 29 37 28 9 18 28 21 29 17 15 32 30 47 53 22 35 35 39 21 30 23 31 30 30 27 13 29 19 10 44 21 18 12 8 7 9 14 45 45 21 13 18 47 51 30 29 44 9 9 25 22 37 12 18 10 11 14 15 29 29 28 30 29 51 51 51 24 30 51 31 24 12 27 9 8 16 15 48 22 34 23 39 20 28 29 29 39 14 15 24 17 10 17 14 20 34 29 11 10 12 11 29 38 18 20 29 27 33 26 14 16 31 21 12 43 41 37 29 25 23 33 23 17 32 39 23 14 26 28 25 29 23 11 20 33 29 13 14 6 40 33 18 13 33 22 14 15 31 15 31 19 28 28 33 20 14 14 33 31 28 27 20 5 12 10 17 28 20 31 12 7 14 4 13 6 7 18 23 13 26 51 10 14 14 19 9 10 30 35 8 30 36 36 20 14 12 8 13 15 23 25 11 12 30 14 11 17 28 7 14 32 10 14 24 20 7 11 17 9 24 23 10 9 11 39 7 18 8 12 15 27 41 35 14 31 19 6 6 5 5 5 12 8 9 17 7 5 24 15 29 16 22 19 21 10 17 27 20 6 25 22 26 14 6 14 5 12 10 42 19 11 29 33 7 12 5 8 8 8 32 32 6 19 32 7 15 9 8 9 20 35 12 35 8 22 26 22 29 19 21 29 17 7 7 10 6 6 10 14 31 9 10 29 13 21 9 15 5 7 8 30 6 16 14 9 20 17 8 15 14 12 5 15 35 20 7 13 6 12 7 8 5 5 13 4 10 15 8 4 12 10 12 4 3 21 18 29 11 7 10 7 8 28 12 14 5 9 29 8 30 5 10 6 7 29 7 34 26 4 9 29 18 16 11 18 18 22 3 3 4 4 5 5 9 5 7 7 11 6 4 16 8 6 7 4 5 7 15 5 21 11 23 5 5 4 7 6 3 4 11 11 20 8 24 5 6 4 21 11 10 4 3 12 9 8 14 15 7 11 12 6 9 6 17 8 5 3 4 19 7 20 6 3 5 2 5 4 7 10 8 7 8 7 6 15 14 3 4 5 5 7 3 4 3 5 4 4 8 8 4 3 3 3 9 4 3 3 1 1 5 9 5 4 3 7 3 3

Alignment Information

BAC End 1

BAC End 2

seq1: chrX_28811002_28812048
seq2: B6Ng01-048I18.b_43_1080

seq1  GAATTCCATCAAATCTCCAAACTCACAAGTTATCAATGAGTAGTCCACTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATCAAATCTCCAAACTCACAAGTTATCAATGAGTAGTCCACTG  50

seq1  ATTCCTATGTCTTTCTGTGGTGCTTTTTAACAATTGGAAAAGATTGACAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCTATGTCTTTCTGTGGTGCTTTTTAACAATTGGAAAAGATTGACAA  100

seq1  TCCATGTGTAATCTCTATCAATCATGGTCTAATCTCTCAGTAAGCAAAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATGTGTAATCTCTATCAATCATGGTCTAATCTCTCAGTAAGCAAAAT  150

seq1  GCATGAGTGGTATTTGGATACTCAGTCTTTATCCACTACTATCTTTTTAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGAGTGGTATTTGGATACTCAGTCTTTATCCACTACTATCTTTTTAC  200

seq1  CTTCTATTTTTATTTTATACCAACCCCAATTCCCCTTCTAGCTTTTGCAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTATTTTTATTTTATACCAACCCCAATTCCCCTTCTAGCTTTTGCAC  250

seq1  CAGTCACAATGTATTATGATGCAATCCTCCTAAGGCCAATGATACTCAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCACAATGTATTATGATGCAATCCTCCTAAGGCCAATGATACTCAGG  300

seq1  CTTTTATGTCTCCAGGAACACACAATTTTAACTGTTTGGTCTTTTGTTAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTATGTCTCCAGGAACACACAATTTTAACTGTTTGGTCTTTTGTTAC  350

seq1  CTTATCTGCCTAAAAATTAATAATCATTATTTCATATCAATTGGTTCTAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATCTGCCTAAAAATTAATAATCATTATTTCATATCAATTGGTTCTAT  400

seq1  TTATACACACACTGTGCATATATGTTATGTGATTATTATTAAAAAAGGCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATACACACACTGTGCATATATGTTATGTGATTATTATTAAAAAAGGCA  450

seq1  TATTTTTTATATTTTCAAAGGACTCTGTTGGATAAAGGTGAAGATTAGAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTTTATATTTTCAAAGGACTCTGTTGGATAAAGGTGAAGATTAGAT  500

seq1  TCCCCCAGAAATGATCTTGTATGACACAGTAGAAATATACTGAGACTTCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCCAGAAATGATCTTGTATGACACAGTAGAAATATACTGAGACTTCA  550

seq1  ATGTCTCCAGCTGTGCCAACCAAGTTCTCTTTCACACATAGTCTGTCTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCTCCAGCTGTGCCAACCAAGTTCTCTTTCACACATAGTCTGTCTTT  600

seq1  CTATGTTTCCAAAATATTTTCATATTCTTTTTTCATTGGTCCTTTTTTTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGTTTCCAAAATATTTTCATATTCTTTTTTCATTGGTCCTTTTTTTC  650

seq1  CTTTGTTCTGAGATCCAGTGAAGTCAGAAAAATGTTATTTTTCATCTTTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGTTCTGAGATCCAGTGAAGTCAGAAAAATGTTATTTTTCATCTTTA  700

seq1  TTTAAAGAGCATATTATTATTATTACCATTATCATTGTTTTATTTACATC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAAGAGCATATTATTATTATTACCATTATCATTGTTTTATTTACATC  750

seq1  TCAAATACTGTCCTGCTCCTGCACCCCCTTGCACAGTTCTTCACCTTATT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAATACTGTCCTGCTCCTGCACCCCCTTGCACAGTTCTTCACCTTATT  800

seq1  CCCTCTCACTTTGCCTCTGAGATGGGTATCACCATGGGCA-TCCCCCTTC  849
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  CCCTCTCACTTTGCCTCTGAGATGGGTATCACCATGGGCATTCCCCCTTC  850

seq1  CCTGGGTCCGCAACTCTAC-AGGATTAGGCAG-AACCTCTCCCACTAAGG  897
      ||||||||||||||||||| |||||||||||| |||||||||||||||||
seq2  CCTGGGTCCGCAACTCTACAAGGATTAGGCAGAAACCTCTCCCACTAAGG  900

seq1  CCAGTCAAGGCAGTCCAATGCT-ACA-TATATTTTGGTGGCCTCAGACCA  945
      |||||||||||||| ||||||| ||| ||||||||||| |||||||||||
seq2  CCAGTCAAGGCAGT-CAATGCTAACATTATATTTTGGTTGCCTCAGACCA  949

seq1  GACTTATTTCCTCTTTGATTGGTGACCTAGTCTTTGGGAGCTCCCAGTGG  995
      ||| ||||||||||||||||||||| |||||| || |||||| |||||| 
seq2  GAC-TATTTCCTCTTTGATTGGTGA-CTAGTC-TTAGGAGCT-CCAGTGT  995

seq1  TACACATTAGTTGACACTGTTGGTCTTCCATGTTGCCAACCCCTTCAGTT  1045
        |||||||| |||||||||  ||||  |||| |||    ||||||||||
seq2  ACCACATTAG-TGACACTGT--GTCT--CATG-TGC---ACCCTTCAGTT  1036

seq1  TT  1047
      ||
seq2  TT  1038

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information