BAC Information

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BAC

Clone NameB6Ng01-049F07
ChromosomeX (Build37)
Map Location 63,320,868 - 63,478,713
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC671840
Downstream geneSlitrk2, LOC666824, LOC627734, EG666828
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-049F07.bB6Ng01-049F07.g
ACCDH873628DH873629
length909105
definitionDH873628|Mus musculus domesticus DNA, BAC clone: B6Ng01-049F07, 5' end.DH873629|Mus musculus domesticus DNA, BAC clone: B6Ng01-049F07, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(63,477,936 - 63,478,713)(63,320,868 - 63,320,972)
sequence
gaattctctatttcagaaccatggaaaaagtaatttctattgtttaaacc
atctaggctgtgatactttgttgcagtagccttattaagctgtcagattg
tgtattatgtctattatctcacatacatcttctaagtcttagacaacatg
ttctgctttaagcatgtttcaaagttggttatcttagttctgtgtgcatt
ctgtgctatctacataagctatacttttcaggtatattttataccacctt
ctttactacattgaaagttttcaataagtcccgttctgctcagattttat
tgttagattgacacatggtagtgtcacacagaaagagtgaactataattg
agagattactttgatttgattggcctacagggatgtctgttggggggtat
tctcatgcttgataattgatatgggaaatatcagtcgaatgtgggtggta
catgcttaggctggtaggtttgagctatataagaaagctagttgagcatg
agccacagagaaatcaaggaagtaaacatttttatctattgtttatatta
cagttcctgccctgatgtctctcagtgttggatagtgacttggaaatgga
agacaaataaaaacagtgctttggtcagtgttttattacagcaagaaaga
agtaaaatagaagatcatgttcttactatcatgtgttttgttagaaagtt
aacataaattctggggattttattcctttttttaatgctttggtactgac
ttgaatgattttaaaattgtctgcttctgccttatttttttccatagtga
acttatattctatatgtgaagtgggaaaaagtgagctttcccagaaaata
tataattcattacagttgtatattgcagaataacaaggacaaacttggtg
ttttataca
agctcttggaagagcagattcctaatttggggggccagatttcatgtgtg
agaagtattcatctaacatccagtgtgtgtgtgtgtgtgtgtgtgtgtgt
gtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_63477936_63478713
seq2: B6Ng01-049F07.b_47_824 (reverse)

seq1  AGAAGCAGACAATTTTAAAATCATTCAAGTCAGTACCAAAGCATTAAAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGCAGACAATTTTAAAATCATTCAAGTCAGTACCAAAGCATTAAAAA  50

seq1  AAGGAATAAAATCCCCAGAATTTATGTTAACTTTCTAACAAAACACATGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAATAAAATCCCCAGAATTTATGTTAACTTTCTAACAAAACACATGA  100

seq1  TAGTAAGAACATGATCTTCTATTTTACTTCTTTCTTGCTGTAATAAAACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTAAGAACATGATCTTCTATTTTACTTCTTTCTTGCTGTAATAAAACA  150

seq1  CTGACCAAAGCACTGTTTTTATTTGTCTTCCATTTCCAAGTCACTATCCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACCAAAGCACTGTTTTTATTTGTCTTCCATTTCCAAGTCACTATCCA  200

seq1  ACACTGAGAGACATCAGGGCAGGAACTGTAATATAAACAATAGATAAAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTGAGAGACATCAGGGCAGGAACTGTAATATAAACAATAGATAAAAA  250

seq1  TGTTTACTTCCTTGATTTCTCTGTGGCTCATGCTCAACTAGCTTTCTTAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTACTTCCTTGATTTCTCTGTGGCTCATGCTCAACTAGCTTTCTTAT  300

seq1  ATAGCTCAAACCTACCAGCCTAAGCATGTACCACCCACATTCGACTGATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGCTCAAACCTACCAGCCTAAGCATGTACCACCCACATTCGACTGATA  350

seq1  TTTCCCATATCAATTATCAAGCATGAGAATACCCCCCAACAGACATCCCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCCATATCAATTATCAAGCATGAGAATACCCCCCAACAGACATCCCT  400

seq1  GTAGGCCAATCAAATCAAAGTAATCTCTCAATTATAGTTCACTCTTTCTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGGCCAATCAAATCAAAGTAATCTCTCAATTATAGTTCACTCTTTCTG  450

seq1  TGTGACACTACCATGTGTCAATCTAACAATAAAATCTGAGCAGAACGGGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGACACTACCATGTGTCAATCTAACAATAAAATCTGAGCAGAACGGGA  500

seq1  CTTATTGAAAACTTTCAATGTAGTAAAGAAGGTGGTATAAAATATACCTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATTGAAAACTTTCAATGTAGTAAAGAAGGTGGTATAAAATATACCTG  550

seq1  AAAAGTATAGCTTATGTAGATAGCACAGAATGCACACAGAACTAAGATAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGTATAGCTTATGTAGATAGCACAGAATGCACACAGAACTAAGATAA  600

seq1  CCAACTTTGAAACATGCTTAAAGCAGAACATGTTGTCTAAGACTTAGAAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAACTTTGAAACATGCTTAAAGCAGAACATGTTGTCTAAGACTTAGAAG  650

seq1  ATGTATGTGAGATAATAGACATAATACACAATCTGACAGCTTAATAAGGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTATGTGAGATAATAGACATAATACACAATCTGACAGCTTAATAAGGC  700

seq1  TACTGCAACAAAGTATCACAGCCTAGATGGTTTAAACAATAGAAATTACT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGCAACAAAGTATCACAGCCTAGATGGTTTAAACAATAGAAATTACT  750

seq1  TTTTCCATGGTTCTGAAATAGAGAATTC  778
      ||||||||||||||||||||||||||||
seq2  TTTTCCATGGTTCTGAAATAGAGAATTC  778

seq1: chrX_63320868_63320972
seq2: B6Ng01-049F07.g_73_177

seq1  AGCTCTTGGAAGAGCAGATTCCTAATTTGGGGGGCCAGATTTCATGTGTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCTTGGAAGAGCAGATTCCTAATTTGGGGGGCCAGATTTCATGTGTG  50

seq1  AGAAGTATTCATCTAACATCCAGTGTGTGTGTGTGTGTGTGTGTGTGTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGTATTCATCTAACATCCAGTGTGTGTGTGTGTGTGTGTGTGTGTGT  100

seq1  GTGTG  105
      |||||
seq2  GTGTG  105