BAC Information

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BAC

Clone NameB6Ng01-053D14
ChromosomeX (Build37)14 (Build37)
Map Location 64,051,647 - 64,052,141100,374,239 - 100,375,342
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneLOC671840, Slitrk2, LOC666824
Downstream geneLOC627734, EG666828, Gm1140, LOC666842
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-053D14.bB6Ng01-053D14.g
ACCDH876336DH876337
length1,0121,090
definitionDH876336|Mus musculus domesticus DNA, BAC clone: B6Ng01-053D14, 5' end.DH876337|Mus musculus domesticus DNA, BAC clone: B6Ng01-053D14, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(64,051,647 - 64,052,141)(100,374,239 - 100,375,342)
sequence
gaattctactggacagcctccagtgactttctttcctacccagaacgatg
ttctgcccccacaaacacttccttctccgtaaacttctttttttcctccc
cattttagctccagctgcttcttgctactgatgggaacccccggtgtcta
gatcacacagccagtgcagagcctctgcatctgttgtttgctgtcattgt
tatgacccttgccccaaatagaaacaaaccagctcatgtacaagcatctt
cctagtcctccaggttccacttctacacaatcattcccaggatagctttc
ctcacctccattgcttcttttctcatttttttaaaattaagtatttattt
catttacatttccaatgcgatcccaaaagttccccacacgctccccactc
actcccccacccacccactcccactttttggccctggctttcccctgtac
tgaggcatataaagtttgaacgaccaatgggcctctctttcaactgatgg
ccgactaggcaatcttctgatacatatgcagctggagacatgagctccgg
ggttgcagacccctttagctccttggttactttctctagctcctccattg
ggggccctgtaatccatccaatggctaactgtgagcatccacttctgtat
ttgctaggccccagcatagtctcacaagagacagctatatatgggccctt
tcagcaaaatcttgctagtgtatgcaatggagtcagcatttggaagctga
ttatgggatggatccccaaatatggcagtctctacatggtccatcctttc
atctcagctccaaactttgtctctgtaactccttccatgggtgttttatt
cccaattctaagaaggagcaaagtgtccacactttggtcttcgctcttct
tgagtttcatgtgttagcaaattgtatattatatcttgggtattctaagt
ttctgggctaatatccccttatcagtgagtacatattgtgtaagttcttt
tgtgattgtgtt
gaattcactacatatacctttcaaagatgtgagtaatttaagactgttga
agagatagctggcaagattttggaaacctcacatttgtttcaaagtcgct
gctgactggaagtctgagtaaaaatggcaatgttcaagtttttactaagt
aaatgtattttcaaaatccaaggtcgttttcaggctcaaaaggatggcac
actttcaacttaataatgatttcgttttcccttgtatgatctctagcttg
gctgggtacacttcctattatacaacctttcctggcttgctgattttact
tagatgataagcccataaaaaagaaaaataattttagccatacaatgaaa
tatatccagaaagaaacacactgaagacttattgatctcctgattgaaaa
acaagtcatatttttctgtaatcaattttcactatattttattgaataaa
agcagaaagttctctgtatttaaaatttatggaattagtttaatgcctgc
tgtgatggctcagctggtgatctgagttccgtcaccaggaagtacatggt
agaaagagagagttaacatctgtacattgtcctttgatctccacacatgg
gacatgacaaccagacacagacacagacacagacacacacagacacacac
agacacacacacacacacacacacacagacacacacactacaaaaaccac
taaatgtttaaaaatagcttttgtatttgcaagtaacaatgagttatttg
actataaaacaaaacagacaatggctacattctcctcctgctaggtcata
tcatggagacttcatcttcaacggccggggaacaggtgcagtctcatttt
atttatatttttgttactgctacagcacatagctacataaatcttgaagt
tagttggggtgggggaggcaatggtatattctgttggtttgcataccaga
gaggttagtcaggttaatttgcactttatagatggaagtacttatatgtc
cagacttggttaaggcagctagatgggtatctgctagatctttcatctta
gaattcctctttctataaatgaacttctaaatagtcagga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_64051647_64052141
seq2: B6Ng01-053D14.b_500_958 (reverse)

seq1  ACACATGAAACTCAAGAAGAATGAAGACTGAAGTGTGGACACTATGCCCC  50
      ||||||||||||||||||||  ||||||  ||||||||||||| ||| ||
seq2  ACACATGAAACTCAAGAAGAGCGAAGACCAAAGTGTGGACACTTTGCTCC  50

seq1  TCCTTAGAATTGGGAACAAAACACCCATGGAAGGAGTTACAGAGACAAAG  100
      | |||||||||||||| |||||||||||||||||||||||||||||||||
seq2  TTCTTAGAATTGGGAATAAAACACCCATGGAAGGAGTTACAGAGACAAAG  100

seq1  TTTGGAGCTGAGATGAAAGGATGGACCATGTAGAGACTGCCATATCCAGG  150
      |||||||||||||||||||||||||||||||||||||||||||||   ||
seq2  TTTGGAGCTGAGATGAAAGGATGGACCATGTAGAGACTGCCATATTTGGG  150

seq1  GATCCACCCCATAATCAGCATCCAAACGCTGACACCATTGCATACACTAG  200
      |||||| |||||||||||| |||||| |||||| ||||||||||||||||
seq2  GATCCATCCCATAATCAGCTTCCAAATGCTGACTCCATTGCATACACTAG  200

seq1  CAAGATTTTATTGAAAGGACCCAGATGTAGCTGTCTCTTGTGAGACTATG  250
      |||||||||  ||||||| |||| || |||||||||||||||||||||||
seq2  CAAGATTTTGCTGAAAGGGCCCATATATAGCTGTCTCTTGTGAGACTATG  250

seq1  CCAGGGCCTAGCAAACACAGAAGTGGATGCTCACAGTCAGCTAATGGATG  300
      |  |||||||||||| ||||||||||||||||||||| ||| | ||||||
seq2  CTGGGGCCTAGCAAATACAGAAGTGGATGCTCACAGTTAGCCATTGGATG  300

seq1  GATCACAGGGCTCCCAATGGAGGAGCTAGAGAAAGTACCCAAGGAGCTAA  350
      ||| ||||||| ||||||||||||||||||||||||| ||||||||||||
seq2  GATTACAGGGCCCCCAATGGAGGAGCTAGAGAAAGTAACCAAGGAGCTAA  350

seq1  AGGGATCTGCAACCCTATAGGTGGAACAACATTATGAACTAACCAGTACC  400
      |||| ||||||                                    |||
seq2  AGGGGTCTGCA------------------------------------ACC  364

seq1  CCGGAGCTCTTGACTCTAGCTGCATATGTATCAAAAGATGGCCTAGTCAG  450
      ||||||||| || ||| |||||||||||||||| ||||| |||||||| |
seq2  CCGGAGCTCATGTCTCCAGCTGCATATGTATCAGAAGATTGCCTAGTCGG  414

seq1  CCATCACTGGAAAGAGAGGCCCATTGGACTTGCAAACTTTATATG  495
      |||||| | |||||||||||||||||| | | |||||||||||||
seq2  CCATCAGTTGAAAGAGAGGCCCATTGGTCGTTCAAACTTTATATG  459

seq1: chr14_100374239_100375342
seq2: B6Ng01-053D14.g_68_1157

seq1  GAATTCACTACATATACCTTTCAAAGATGTGAGTAATTTAAGACTGTTGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTACATATACCTTTCAAAGATGTGAGTAATTTAAGACTGTTGA  50

seq1  AGAGATAGCTGGCAAGATTTTGGAAACCTCACATTTGTTTCAAAGTCGCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGATAGCTGGCAAGATTTTGGAAACCTCACATTTGTTTCAAAGTCGCT  100

seq1  GCTGACTGGAAGTCTGAGTAAAAATGGCAATGTTCAAGTTTTTACTAAGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGACTGGAAGTCTGAGTAAAAATGGCAATGTTCAAGTTTTTACTAAGT  150

seq1  AAATGTATTTTCAAAATCCAAGGTCGTTTTCAGGCTCAAAAGGATGGCAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGTATTTTCAAAATCCAAGGTCGTTTTCAGGCTCAAAAGGATGGCAC  200

seq1  ACTTTCAACTTAATAATGATTTCGTTTTCCCTTGTATGATCTCTAGCTTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTCAACTTAATAATGATTTCGTTTTCCCTTGTATGATCTCTAGCTTG  250

seq1  GCTGGGTACACTTCCTATTATACAACCTTTCCTGGCTTGCTGATTTTACT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGGTACACTTCCTATTATACAACCTTTCCTGGCTTGCTGATTTTACT  300

seq1  TAGATGATAAGCCCATAAAAAAGAAAAATAATTTTAGCCATACAATGAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATGATAAGCCCATAAAAAAGAAAAATAATTTTAGCCATACAATGAAA  350

seq1  TATATCCAGAAAGAAACACACTGAAGACTTATTGATCTCCTGATTGAAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATCCAGAAAGAAACACACTGAAGACTTATTGATCTCCTGATTGAAAA  400

seq1  ACAAGTCATATTTTTCTGTAATCAATTTTCACTATATTTTATTGAATAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGTCATATTTTTCTGTAATCAATTTTCACTATATTTTATTGAATAAA  450

seq1  AGCAGAAAGTTCTCTGTATTTAAAATTTATGGAATTAGTTTAATGCCTGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGAAAGTTCTCTGTATTTAAAATTTATGGAATTAGTTTAATGCCTGC  500

seq1  TGTGATGGCTCAGCTGGTGATCTGAGTTCCGTCACCAGGAAGTACATGGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGATGGCTCAGCTGGTGATCTGAGTTCCGTCACCAGGAAGTACATGGT  550

seq1  AGAAAGAGAGAGTTAACATCTGTACATTGTCCTTTGATCTCCACACATGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGAGAGAGTTAACATCTGTACATTGTCCTTTGATCTCCACACATGG  600

seq1  GACATGACAACCAGACACAGACACAGACACAGACACACACAGACACACAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATGACAACCAGACACAGACACAGACACAGACACACACAGACACACAC  650

seq1  AGACACACACACACACACACACACACAGACACACACACTACAAAAACCAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACACACACACACACACACACACACAGACACACACACTACAAAAACCAC  700

seq1  TAAATGTTTAAAAATAGCTTTTGTATTTGCAAGTAACAATGAGTTATTTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATGTTTAAAAATAGCTTTTGTATTTGCAAGTAACAATGAGTTATTTG  750

seq1  ACTATAAAACAAAACAGACAATGGCTACATTCTCCTCCTGCTAGGTCATA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATAAAACAAAACAGACAATGGCTACATTCTCCTCCTGCTAGGTCATA  800

seq1  TCATGGAGACTTCATCTTCAACGGCCGGGGAACAGGTGCAGTCTCATTTT  850
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  TCATGGAGACTTCATCTTCAACGGCCGGGGAACAGGTGCAGTCTCA-TTT  849

seq1  TATTTATATTTTTGTTACTGCTACAGCACATAGCTACATAAATCTTGAAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTATATTTTTGTTACTGCTACAGCACATAGCTACATAAATCTTGAAG  899

seq1  TTAGTTGGGGTGGGGGAAGGCAATGGTATATTCTGTTGGTTTTGCATACC  950
      |||||||||||||||| |||||||||||||||||||||| ||||||||||
seq2  TTAGTTGGGGTGGGGG-AGGCAATGGTATATTCTGTTGG-TTTGCATACC  947

seq1  AGGAGAGGTTAGTCAGGTTAATTTGCAC-TTATAGATGGAAGGTACCTAT  999
      | |||||||||||||||||||||||||| |||||||||||| |||| |||
seq2  A-GAGAGGTTAGTCAGGTTAATTTGCACTTTATAGATGGAA-GTACTTAT  995

seq1  ATGTCCCAGACTTTGCTAAGGCAGCTAGAATGGGTATCTTGCTAAGATC-  1048
      |||| |||||||| | |||||||||||| ||||||||| |||| ||||| 
seq2  ATGT-CCAGACTTGGTTAAGGCAGCTAG-ATGGGTATC-TGCT-AGATCT  1041

seq1  TTCATCTTAAGAATTCCTCTTTTCTATATTTAATGAAACCTTTCTAAGAG  1098
      |||||||| |||||||||| ||||||||   ||||||  |||   || ||
seq2  TTCATCTT-AGAATTCCTC-TTTCTATA---AATGAA--CTTCTAAATAG  1084

seq1  TCAGGA  1104
      ||||||
seq2  TCAGGA  1090