BAC Information

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BAC

Clone NameB6Ng01-053E03
ChromosomeX (Build37)
Map Location 87,001,199 - 87,001,736
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC667911, LOC100041707, EG436213, LOC667919, LOC100041727, LOC667934, Pet2, EG629419, 4932429P05Rik
Downstream geneLOC633246, Nanog-ps1, 4930415L06Rik, EG547215, Gm370, LOC194615, LOC629471
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-053E03.bB6Ng01-053E03.g
ACCDH876360DH876361
length1,242969
definitionDH876360|Mus musculus domesticus DNA, BAC clone: B6Ng01-053E03, 5' end.DH876361|Mus musculus domesticus DNA, BAC clone: B6Ng01-053E03, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaaggcccatacctaaacatgataaaagaaatctacaggaaacca
gtagtcaacatcaaagtaaatggtgagaagctggaagcaatcccactaaa
atcagggtctagacaaggctgcccaatttctccctacctattcaacattg
tacttcaagtcctagccagagcaattcaacaacaaaggagatcaagggga
tacaaattggaaaggaagaagtcaaaatatcactttttgcagatgatatg
atagtaatatataaatgaccctaaaaattccaccagagaacacctaaacc
tgataaacagctttggtgaagtagctggatataaaattaactcaaacaag
tcaatggcctttctctacccaaagaataaacaggctgagaaagaaattag
ggaaacaacgcccttctcaatagtcacaaatattataaaataccttggca
tgactctaactagggaagtgaaatatctgtatgataagaacttcaagtct
ctgaagaaagaaattaaaggagatctcagaagatagaaagatttcccatg
ctcattgattggcaggaacaacattgtaaaaatggctatcttgccaaaag
caatctagagattcaatgcaacccccatcaaaattccaactcaattctcc
agcgaattagaaagaacaatcttcaaattcatctggaaaaacaaaaaacc
taggatagcaaaaactcttctcaaggataaaaaaaaacctgggggaatca
ccatgcctgacctaaagctttactacagagtaactgtgataaaacaaagt
catggtattggtataatgacagaaaagtagaccaatggaatagaattgaa
gacccagaaatgaacccacacacctaaggtcacttgttcttcgacaaggg
acctaaaaccatccagtggaaagaagacagcattttcaacaaatggtgct
ggcacaactggtggttatcatgaagaagatgcgaattgatccattcctat
ctccttgcactaagtcaatcttagtgatcatgacaccacataaaaccaag
gacactgtatctatagaggagaaagtggagaaaatcctcgaagatattgc
acaaggggaatgcttgagtgatagcatggcctgtgctgaagatcttaatg
gcaaatggaactctgaacgcaagttccgtaccaaagacctcaattcaagg
ccacattgaagactttcattccttcagaagaccattactcat
gaattctgtgacttacttcaattctcttccttttttctatttttttaatt
agattttttttatttacattacaaatgctatcccgaaagtcacctatacc
caccccctgccccgctcccctacccacccactcccacttcttggccctgg
cattcccctgtactggggcatttaaactttgcaataccaagaggcctctc
ttcccagtgatggccgaataggccatcttctgctacatatgcagctagag
acactagctctgggggtacttgttattttgtattgtagttccaccaatag
ggttgcagaccccttcagctccatgggtgtttttctctagtttctccatt
ggggaccctgtgatccatccaatagctgactgtgagcatccattactgta
tttgccaggcattggcataggctcatacgagacagctatatcagggtcct
ttcagcaaaattttgctggcataagcaatagtgcccggttttggtggctg
attatgggatagatcccagggtgggggtagtctctggatagtccatcctt
tcgtcttatctccaaactttgtctctgtaattcctttcatgggtattttg
ttccctattctaaggaggaatgaagtatcctcattttggtcttccttctt
cttgtttttcttgtgttttgcaaattgtattttgagtattctaagtttct
gggctaatatccacttatcagtgagtgcataactagtgacttcttttgtg
attgggttacctcactcaggatgatatcctccagatacatccatttgctg
aagaatttcataaattcattgtttttaatagctaagtagttatccaatgt
gtaaatgtaccaaattttgtgtttcattcctctgttgagggacatatggg
ttctttcagcttcaggctattataataagtctgttatgaacatatggggc
atgtgttctattaccagtt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_87001199_87001736
seq2: B6Ng01-053E03.g_67_604

seq1  GAATTCTGTGACTTACTTCAATTCTCTTCCTTTTTTCTATTTTTTTAATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTGACTTACTTCAATTCTCTTCCTTTTTTCTATTTTTTTAATT  50

seq1  AGATTTTTTTTATTTACATTACAAATGCTATCCCGAAAGTCACCTATACC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTTTTTTTATTTACATTACAAATGCTATCCCGAAAGTCACCTATACC  100

seq1  CACCCCCTGCCCCGCTCCCCTACCCACCCACTCCCACTTCTTGGCCCTGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCCCCTGCCCCGCTCCCCTACCCACCCACTCCCACTTCTTGGCCCTGG  150

seq1  CATTCCCCTGTACTGGGGCATTTAAACTTTGCAATACCAAGAGGCCTCTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCCCCTGTACTGGGGCATTTAAACTTTGCAATACCAAGAGGCCTCTC  200

seq1  TTCCCAGTGATGGCCGAATAGGCCATCTTCTGCTACATATGCAGCTAGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCAGTGATGGCCGAATAGGCCATCTTCTGCTACATATGCAGCTAGAG  250

seq1  ACACTAGCTCTGGGGGTACTTGTTATTTTGTATTGTAGTTCCACCAATAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTAGCTCTGGGGGTACTTGTTATTTTGTATTGTAGTTCCACCAATAG  300

seq1  GGTTGCAGACCCCTTCAGCTCCATGGGTGTTTTTCTCTAGTTTCTCCATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGCAGACCCCTTCAGCTCCATGGGTGTTTTTCTCTAGTTTCTCCATT  350

seq1  GGGGACCCTGTGATCCATCCAATAGCTGACTGTGAGCATCCATTACTGTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGACCCTGTGATCCATCCAATAGCTGACTGTGAGCATCCATTACTGTA  400

seq1  TTTGCCAGGCATTGGCATAGGCTCATACGAGACAGCTATATCAGGGTCCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCCAGGCATTGGCATAGGCTCATACGAGACAGCTATATCAGGGTCCT  450

seq1  TTCAGCAAAATTTTGCTGGCATAAGCAATAGTGCCCGGTTTTGGTGGCTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGCAAAATTTTGCTGGCATAAGCAATAGTGCCCGGTTTTGGTGGCTG  500

seq1  ATTATGGGATAGATCCCAGGGTGGGGGTAGTCTCTGGA  538
      ||||||||||||||||||||||||||||||||||||||
seq2  ATTATGGGATAGATCCCAGGGTGGGGGTAGTCTCTGGA  538