BAC Information

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BAC

Clone NameB6Ng01-053K16
ChromosomeX (Build37)
Map Location 72,454,939 - 72,456,015
singlet/doubletsinglet
Overlap geneF8
Upstream geneFlna, Emd, LOC100041344, Rpl10, Snora70, Dnase1l1, Taz, B230340J04Rik, Atp6ap1, Gdi1, D0HXS9928E, Plxna3, Lage3, Ubl4, Slc10a3, 1810037C20Rik, G6pdx, Ikbkg, EG628456, LOC628465, LOC100041484, LOC674920, EG245472, Olfr1326-ps1, Olfr1325, EG434797, LOC385383, EG667379, LOC667382, LOC546321, LOC667387, EG628518, Olfr1327-ps1, LOC628637, LOC667413, LOC100041594, LOC627775, EG546325, LOC100041017, EG628573, LOC100041642, LOC667437, EG667446, LOC669291, Gab3, Dkc1, Mpp1, EG547412, 4930428E23Rik, EG667190
Downstream geneLOC572559, LOC667218, Fundc2, Mtcp1, Brcc3, LOC667496, Vbp1, Rab39b, EG635243, Pls3, LOC635275, EG635295, LOC667537, LOC385472
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-053K16.bB6Ng01-053K16.g
ACCDH876651DH876652
length1,1931,075
definitionDH876651|Mus musculus domesticus DNA, BAC clone: B6Ng01-053K16, 5' end.DH876652|Mus musculus domesticus DNA, BAC clone: B6Ng01-053K16, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaagagatggaaaaaaaaagtctcaggtgcagaagattccatata
aaacatggacacaacaatcaaagaaaatacaaaatgtaaaaagatcctaa
ctcaaaacatccaggaaatccaggacacaatcagaagaccaaacctacag
ataataggtatagatgagaatggagattttaaactaaaagggccagtaaa
tgtcttcaacaaaattatcgaagaaagcttccctaacctaaagaaagaga
tgcccctgaacatacaagaaacctacagaatagaatagactggaatagaa
aagaaattactcctgacacataataatcagaacaacaaatgcactaaata
aagaaaaaatattaaaagcagtaagggacatctggaataacaaaaaacct
aggatatcaaaaactcttctcaaggataaaagaacctctggtagaatcac
catgcctgacctaaagctttactacagagcaattgtgataaaaaactgca
tggtactggtatagtgacagacaagtagaccaatggaatagaattgaaga
ctcagaaatgaacccacacatctatggtcatttgatcttcgacaagggag
ctaaaaccatccagtggaagaaatttcaacaaagcattttcaacaaatgg
tgctggcacaactggttgttatcatgtagaagaatgcgaatcgatccatt
cctatctccttgtactaaggtcaaatctaagtggatcaaggaacttcaca
taaaaccagagacactgaaacttatagaggagaaagtagggaaagctttg
aagatatgggcacaggggaaaaattcctgaatagaacagcaattggcttg
cgctttaagatcgagaattgacaaatgggacctcatgaaactgcaaagct
tctgcaaggcaaagacaccgtcaataagacaaaggacgaccaacaaatgg
gaaagatctttacctatctaaatcagatagggactaatatccaatatatt
aaaggactcaggagtggcctccagaaaatccataacccattaaaatggag
cctcagactgaagaaagaattctctctgagaatggcataaaagcaccctg
taaaaaaatttcacatcctttatcttatgatgtctaatcgacacctggaa
ttcccctatacccatgtcgtattggctaaaatcaatattccgt
gaattcttagtcaaataaaggaggcagacaaacccttatgtacagtgata
agtgttgtagtatggttacaaagacagttgtggatttctcagagcaaata
atgacaaaggagattttattcaaatatcttcctcaggtgaatgatccaaa
acaatggttgcaagtggacttacaaaagacaatgaaagtcactggaataa
taacccagggagtgaaatctctctttaccagcatgtttgtgaaagagttc
cttatttccagcagtcaagatggccatcactggactcaaattttatacaa
tggcaaggtaaaggtatgttctcataagagaggcacagtgtttatggtga
ctcaagcctgtaaccctttcacacagccataggtcatgttgagtttaaag
actgagaccctgccttaaataaatgaacaaaagacataacacctgtcttt
gatcttgacatttagagatagaaccagattgatttgtgatcaccctctca
ggacacaatttattaagtacctacattaacaggacactgtgaacaacttt
atgagagaacacagtgacccccaacaggggagtaaaatttcaagggataa
aaaaaagtacagccaagaattgtttctcatattgaaagtcatacagaatg
attgccaaaaaattaaatacagagggttgcaatttaggtcttttttttct
tttcttttcttttctttctttctttctttctttctttctttctttctttc
tttctttctttcttctttggacaactgtttaatgatgctcttattctcac
tagcaatgctagacttccaaaccttactaactttaactatagtggcccat
cttaactgggatttctagcttattccacaaagtataccactataagcata
taacaagtcttagtatgccataaataatatgagtagcaatagtttacatc
atctttggtatttgtaattttttgtaatattttttaaccaagaataaacc
atgtggggtatgtcagctttctattacttaggacaaccatcttgaaataa
acaactctatatggacagtttgaag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_72454939_72456015
seq2: B6Ng01-053K16.g_70_1144 (reverse)

seq1  CATCAAACTGTCATTATA-AGTTGTTTATCTC-AGATGGTTGTCAT-AGT  47
      | ||||||||||  |||| |||||||||| || ||||||||||| | |||
seq2  CTTCAAACTGTCCATATAGAGTTGTTTATTTCAAGATGGTTGTCCTAAGT  50

seq1  AATGGAAAGCTGACATACCCCACCATGGTTAATTCTTTGTTTAAAAATAT  97
      ||| |||||||||||||||||| ||||||| |||||| ||| ||||||||
seq2  AATAGAAAGCTGACATACCCCA-CATGGTTTATTCTTGGTTAAAAAATAT  99

seq1  TACAAAAAAATTACAAAATACCAAAGATGATGTAAACTATTGCTACTCAT  147
      ||| |||||||||| |||||||||||||||||||||||||||||||||||
seq2  TAC-AAAAAATTAC-AAATACCAAAGATGATGTAAACTATTGCTACTCAT  147

seq1  ATTATTTATGGCATACTAAGACTTGTATTATGCTTATAGTTGGTATACTT  197
      ||||||||||||||||||||||||||  ||||||||||| ||||||||||
seq2  ATTATTTATGGCATACTAAGACTTGTTATATGCTTATAG-TGGTATACTT  196

seq1  TGTTGAATTAGCTAGAAAATCCAAGTTAAGATGGGCCACTATAGTTAAAG  247
      ||| |||| |||||| |||||| |||||||||||||||||||||||||||
seq2  TGTGGAATAAGCTAG-AAATCCCAGTTAAGATGGGCCACTATAGTTAAAG  245

seq1  TTAGTAAGGTTTGGAAGTCTAGCATTGCTAGTGAGAATAAGAGCATCATT  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTAAGGTTTGGAAGTCTAGCATTGCTAGTGAGAATAAGAGCATCATT  295

seq1  AAACAGTTGTCCAAAGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAA  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAGTTGTCCAAAGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAA  345

seq1  GAAAGAAAGAAAGAAAGAAAAGAAAAGAAAAGAAAAAAAAGACCTAAATT  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGAAAGAAAGAAAGAAAAGAAAAGAAAAGAAAAAAAAGACCTAAATT  395

seq1  GCAACCCTCTGTATTTAATTTTTTGGCAATCATTCTGTATGACTTTCAAT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAACCCTCTGTATTTAATTTTTTGGCAATCATTCTGTATGACTTTCAAT  445

seq1  ATGAGAAACAATTCTTGGCTGTACTTTTTTTTATCCCTTGAAATTTTACT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGAAACAATTCTTGGCTGTACTTTTTTTTATCCCTTGAAATTTTACT  495

seq1  CCCCTGTTGGGGGTCACTGTGTTCTCTCATAAAGTTGTTCACAGTGTCCT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTGTTGGGGGTCACTGTGTTCTCTCATAAAGTTGTTCACAGTGTCCT  545

seq1  GTTAATGTAGGTACTTAATAAATTGTGTCCTGAGAGGGTGATCACAAATC  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAATGTAGGTACTTAATAAATTGTGTCCTGAGAGGGTGATCACAAATC  595

seq1  AATCTGGTTCTATCTCTAAATGTCAAGATCAAAGACAGGTGTTATGTCTT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTGGTTCTATCTCTAAATGTCAAGATCAAAGACAGGTGTTATGTCTT  645

seq1  TTGTTCATTTATTTAAGGCAGGGTCTCAGTCTTTAAACTCAACATGACCT  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTCATTTATTTAAGGCAGGGTCTCAGTCTTTAAACTCAACATGACCT  695

seq1  ATGGCTGTGTGAAAGGGTTACAGGCTTGAGTCACCATAAACACTGTGCCT  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCTGTGTGAAAGGGTTACAGGCTTGAGTCACCATAAACACTGTGCCT  745

seq1  CTCTTATGAGAACATACCTTTACCTTGCCATTGTATAAAATTTGAGTCCA  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTATGAGAACATACCTTTACCTTGCCATTGTATAAAATTTGAGTCCA  795

seq1  GTGATGGCCATCTTGACTGCTGGAAATAAGGAACTCTTTCACAAACATGC  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATGGCCATCTTGACTGCTGGAAATAAGGAACTCTTTCACAAACATGC  845

seq1  TGGTAAAGAGAGATTTCACTCCCTGGGTTATTATTCCAGTGACTTTCATT  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTAAAGAGAGATTTCACTCCCTGGGTTATTATTCCAGTGACTTTCATT  895

seq1  GTCTTTTGTAAGTCCACTTGCAACCATTGTTTTGGATCATTCACCTGAGG  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTTTGTAAGTCCACTTGCAACCATTGTTTTGGATCATTCACCTGAGG  945

seq1  AAGATATTTGAATAAAATCTCCTTTGTCATTATTTGCTCTGAGAAATCCA  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATATTTGAATAAAATCTCCTTTGTCATTATTTGCTCTGAGAAATCCA  995

seq1  CAACTGTCTTTGTAACCATACTACAGCACTTATCACTGTACATAAGGGTT  1047
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  CAACTGTCTTTGTAACCATACTACAACACTTATCACTGTACATAAGGGTT  1045

seq1  TGTCTGCCTCCTTTATTTGACTAAGAATTC  1077
      ||||||||||||||||||||||||||||||
seq2  TGTCTGCCTCCTTTATTTGACTAAGAATTC  1075