BAC Information

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BAC

Clone NameB6Ng01-055C14
ChromosomeX (Build37)
Map Location 125,051,244 - 125,052,481
singlet/doubletsinglet
Overlap genenone
Upstream gene4930412D23Rik, LOC385523, LOC100040516, Mdm4-ps, EG237030
Downstream geneLOC100040538, LOC100040550, LOC100040562, LOC100040570, LOC669120
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-055C14.bB6Ng01-055C14.g
ACCDH877700DH877701
length1,2031,074
definitionDH877700|Mus musculus domesticus DNA, BAC clone: B6Ng01-055C14, 5' end.DH877701|Mus musculus domesticus DNA, BAC clone: B6Ng01-055C14, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagacttttgagaataatcttatcgaggaaagaaagaaagaaaga
aagaaagaaagaaagaaagaaaggaaggaaggaaggaaggaaggaaggaa
ggaaggaaggaaggaaggaaggaaggaaggaaggaaggaagctttcaaat
gctcatattccaatatctttatggtaacacgagcaaatcaggttttcctc
gtagtcacaaatgattatacgctaggctactttttaaaggctcatttcaa
tccttatgttcaagttctttgcacactcaattttctttattagccaagca
ttctgaatgaatagtttgcatttggaccttatgagttctgtttttggctg
tttatagttcagcacattcttgaatactgactatcataaagagtgttcaa
aaatcaatctacagaggcaattttgtgacatgcaacacttaacttcctag
ctggcttgattgctgttagtggtcattaattgattacatttctagtttta
attatggttctgtatttgtcaaatacctggacaaatcaagaagtactaag
atcctcctcatctttataattaacctgtcaaatgcagaacaaatatctta
catcaactctgtgggagttttagtcatttggatgataatttcccttccac
agaaacactcactgctggtgagattcaaaaaataatctactactgcattg
ttcctaaaaaagacagaacattttatatctaggtgaagtgacatgataaa
caaaaagtgtgttcctattcatgccatccatatgtgcttacccagcctat
attccagtatcataataaaagttaaaagttaatacatttctaaataatca
gaggtgtcataaatattcactgtggaggatttcctcaataggctgtcagc
atcctgtagattgctctgcagacacagtgtagccttacttacagatgagt
ctcttgagagcagtagagacaccctgaaagtagagagatgacattatata
aatgcggacatttcgcatttgctgattttgtaatcatctttttttatgat
ataatgattttatgagctattttccttcagcttcttcctaaatagagact
gaatttaaggtcaacatgaagaattctaaattcaatgctgttttatacac
cacaatccctcagttctgctgcattaaattcacgtctcgcctatgtgggg
att
gaattcctttccttcccagaactgtttgtttgtttgttttttaattaggt
attttcttcatttacatttcaagtgctgtcccaaaagtcccccataccct
cccccacccactcccctaccaacccactcctacttcttggccctggtgtt
cccctgtactgaggcatatgaggtttgcaagaccaaggagcctctcctct
tcccaatgatggctgactaggccatcttctactacatatgcagctagaga
cacgagttctggaagtactggttagttgatattattgttccacctatagg
gttgcagacccctttagctccttggtaatttcactagctcctccattggg
ggtcctgtgttccatccaatagccgactgtgagcatccacttctatgttt
gccaggcactggcctcgcctcacaacagacagctatatcagggtcctttc
agcaaaatcttgctggcatatgcgatggtgtctgtgtttgggggctgact
atgggatggatccccaggttcggcagtctctagatggtccatcttttcgt
ctcagctccaaactttgtctctgtaactccttccatgggtattttgttcc
caattctaagaaggggcaaagtgaccacactttggtcttcattcttcttg
agtttcatgtgttttccaacttgtaacttgggtattctaagtttctgggc
taatatccatttatcagtgaatacatatcatgtgagttcttttgtgattg
ggttacctcactcagggtgatacccgaaaggatctttacccatcctaaat
cagataggggactaatattcaatatatataaagaactcaaggaggtagac
tccagaaaatcaaattgccacagaccctctgggtcctttgtctgcataga
acgggtcttctgggcaggtcggcaaagcatcggcggtgggagacagacca
acacatgagcttgtgtggaatctgatgcatgccacaaagtgaccccagtt
ttttaatacagaaaatacaagggttggagtccatcagcaaggtacattga
agttcccaggtacaaaacaaggga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_125051244_125052481
seq2: B6Ng01-055C14.b_48_1250

seq1  GAATTCAGACTTTTGAGAATAATCTTATCGAGGAAAGAAAGAAAGAAAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGACTTTTGAGAATAATCTTATCGAGGAAAGAAAGAAAGAAAGA  50

seq1  AAGAAAGAAAGAAAGAAAGAAAGGAAGGAAGGAAGGAAGGAAGGAAGGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAAGAAAGAAAGAAAGAAAGGAAGGAAGGAAGGAAGGAAGGAAGGAA  100

seq1  GGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGCTTTCAAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGCTTTCAAAT  150

seq1  GCTCATATTCCAATATCTTTATGGTAACACGAGCAAATCAGGTTTTCCTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCATATTCCAATATCTTTATGGTAACACGAGCAAATCAGGTTTTCCTC  200

seq1  GTAGTCACAAATGATTATACGCTAGGCTACTTTTTAAAGGCTCATTTCAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGTCACAAATGATTATACGCTAGGCTACTTTTTAAAGGCTCATTTCAA  250

seq1  TCCTTATGTTCAAGTTCTTTGCACACTCAATTTTCTTTATTAGCCAAGCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTATGTTCAAGTTCTTTGCACACTCAATTTTCTTTATTAGCCAAGCA  300

seq1  TTCTGAATGAATAGTTTGCATTTGGACCTTATGAGTTCTGTTTTTGGCTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGAATGAATAGTTTGCATTTGGACCTTATGAGTTCTGTTTTTGGCTG  350

seq1  TTTATAGTTCAGCACATTCTTGAATACTGACTATCATAAAGAGTGTTCAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATAGTTCAGCACATTCTTGAATACTGACTATCATAAAGAGTGTTCAA  400

seq1  AAATCAATCTACAGAGGCAATTTTGTGACATGCAACACTTAACTTCCTAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCAATCTACAGAGGCAATTTTGTGACATGCAACACTTAACTTCCTAG  450

seq1  CTGGCTTGATTGCTGTTAGTGGTCATTAATTGATTACATTTCTAGTTTTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCTTGATTGCTGTTAGTGGTCATTAATTGATTACATTTCTAGTTTTA  500

seq1  ATTATGGTTCTGTATTTGTCAAATACCTGGACAAATCAAGAAGTACTAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATGGTTCTGTATTTGTCAAATACCTGGACAAATCAAGAAGTACTAAG  550

seq1  ATCCTCCTCATCTTTATAATTAACCTGTCAAATGCAGAACAAATATCTTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTCCTCATCTTTATAATTAACCTGTCAAATGCAGAACAAATATCTTA  600

seq1  CATCAACTCTGTGGGAGTTTTAGTCATTTGGATGATAATTTCCCTTCCAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCAACTCTGTGGGAGTTTTAGTCATTTGGATGATAATTTCCCTTCCAC  650

seq1  AGAAACACTCACTGCTGGTGAGATTCAAAAAATAATCTACTACTGCATTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAACACTCACTGCTGGTGAGATTCAAAAAATAATCTACTACTGCATTG  700

seq1  TTCCTAAAAAAGACAGAACATTTTATATCTAGGTGAAGTGACATGATAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTAAAAAAGACAGAACATTTTATATCTAGGTGAAGTGACATGATAAA  750

seq1  CAAAAAGTGTGTTCCTATTCATGCCATCCATATGTGCTTACCCAGCCTAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAAGTGTGTTCCTATTCATGCCATCCATATGTGCTTACCCAGCCTAT  800

seq1  ATTCCAGTATCATAATAAAAGTTAAAAGTTAATACATTTCTAAATAATCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCAGTATCATAATAAAAGTTAAAAGTTAATACATTTCTAAATAATCA  850

seq1  GAGGTGTCATAAATATTCACTGTGGAGGATTTCCTCAATAGGCTGTCAGC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTGTCATAAATATTCACTGTGGAGGATTTCCTCAATAGGCTGTCAGC  900

seq1  ATCCTGTAGATTGCTCTGCAGACACAGTGTAGCCTTACTTACAGATGAGT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTGTAGATTGCTCTGCAGACACAGTGTAGCCTTACTTACAGATGAGT  950

seq1  CTCTTGAGAGCAGTAGAGACACCCTGGAAAGTAGGAGGAGATGACATTAA  1000
      ||||||||||||||||||||||||| ||||||||   ||||||||||| |
seq2  CTCTTGAGAGCAGTAGAGACACCCT-GAAAGTAG--AGAGATGACATT-A  996

seq1  TATAAAATGCGGACATTTCGGCATTTTGCTGAATTTTGTAATCATCTTTT  1050
      ||| ||||||||||||||| ||| ||||||| ||||||||||||||||||
seq2  TAT-AAATGCGGACATTTC-GCA-TTTGCTG-ATTTTGTAATCATCTTTT  1042

seq1  TTTATGATATAAATGATTTTTATGAGCTATTTTTCTCTCAGCTTTCCTTC  1100
      |||||||||| ||||| |||||||||||||||| || |||||||  ||||
seq2  TTTATGATAT-AATGA-TTTTATGAGCTATTTTCCT-TCAGCTT--CTTC  1087

seq1  ACTAATAGAGACTTGAATTTTAGAGGTCAACATGAAGAATTCCTAAATTC  1150
         ||||||||| |||||||   |||||||||||||||||| ||||||||
seq2  CTAAATAGAGAC-TGAATTT--AAGGTCAACATGAAGAATT-CTAAATTC  1133

seq1  TAGTGCTGCTTTAATAAACAAACAAACAAAAAATACACTCCAGTTCTGCT  1200
       | ||||| ||| ||| ||  |||| |          |  ||||||||||
seq2  -AATGCTG-TTTTATACAC-CACAATC----------CCTCAGTTCTGCT  1170

seq1  GCATTTAAAATTCACGTCTCAGCTATATGTGGTGGATT  1238
      |||||  |||||||||||||  |  ||||||| |||||
seq2  GCATT--AAATTCACGTCTCGCC--TATGTGG-GGATT  1203