BAC Information

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BAC

Clone NameB6Ng01-057E17
ChromosomeX (Build37)
Map Location 60,028,838 - 60,029,905
singlet/doubletsinglet
Overlap geneLOC671878
Upstream geneLOC654353, EG627299, LOC666654, LOC385367, LOC671741, 4933402E13Rik, 4931400O07Rik, 1700019B21Rik
Downstream geneLOC666695, EG627420
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-057E17.bB6Ng01-057E17.g
ACCDH879206DH879207
length1,1471,059
definitionDH879206|Mus musculus domesticus DNA, BAC clone: B6Ng01-057E17, 5' end.DH879207|Mus musculus domesticus DNA, BAC clone: B6Ng01-057E17, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctcaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggagtgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacctagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtattactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
gaaactcacacaatatgtactcactgataagtggatatttgccccaaacc
taggatacccaagatataagatataatttgctaaacacatgaaactcaag
aagaatgaagactgaagtgtggacactatgcccctccttagatttgggaa
caaaacacccatggaaggagttacagagacaaagtttggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttattgaaa
ggacccagatgtagctgtctcttgtgagactatgccggggctagcaaaca
cagaagtggatgctcacagtcagctaatggatggatcatagggctcccat
ggaggagctcgagaaagtagcaaaggagctaaaggatctgcaccccttag
gtggacacactatgaactaacagtaccccggacgcttgatcttagctgct
tgtataaagatggctatctgctactcggaagagaggccattgactgcact
tattgctcagtactggggaagcaggccaaagggagggtggtcgtatg
gaattccacaggacaatacagacgccccagctgttcttcatagagcgaca
gggcttcagtcaagttgacacagttcccctgtgtgaagtattttccatcc
tgtttcagaaccttcattgacaggtcgagaatcagtctgaggaaatccca
tgtggaatcttcttctggagatgtagagatagggacagctgtcaaatcat
taatcacataatcaaactctctcccttctttggcgtacatcttcagtact
gggatacagtcttctataagaacctgatagcagtctcctctaagattgtc
taagacatctccacatgttctccgcatgtatttcttacatccatcaatta
ccatttggtcaatctctaccatagtgaccatctttggtttcagtttgaca
atttcacacaatatgcctccatcgccgcctcccagaatcagtacatcttt
gccagtgtagtcttctttaccactgcccatgatggcacgggtatatgcca
agtcactctctgccaaattaacatccccgctgaggatgagaatattccca
aactgcttcgagtgtaggattttgatgttctgatatggtgaatcttcatc
atacaccacttcatctatgtcatactcaaccaggcgcccatcagcagtag
gccagtatctgtcaatggcccctccgcgaactatgggtggtaatcgcttc
acccgcccagtactgtcttgactcaattctttcattttttcttctatttt
gttcaaaaggctgtcagtttcttgtttgccttgcacatcactgtcgtaac
tctgaaggtccagcaacaccaatccatgtggataaattcgcaaattggca
aagctgccattcttgttcgtgtaagttgctaaatatccatggtcctgcca
gtgtgcacttgactctgtcatccctgcttctgaaaatggactgaaggctt
tcagaatggcctcaccatcaacttggcgccgaacttgaagtcaaactgtt
ggtctgctgctgcctattggggcaggcctctgtgcatgcctggggaggca
accgcagga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_60028838_60029905
seq2: B6Ng01-057E17.g_68_1126

seq1  GAATTCCACAGGACAATACAGACGCCCCAGCTGTTCTTCATAGAGCGACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCACAGGACAATACAGACGCCCCAGCTGTTCTTCATAGAGCGACA  50

seq1  GGGCTTCAGTCAAGTTGACACAGTTCCCCTGTGTGAAGTATTTTCCATCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCTTCAGTCAAGTTGACACAGTTCCCCTGTGTGAAGTATTTTCCATCC  100

seq1  TGTTTCAGAACCTTCATTGACAGGTCGAGAATCAGTCTGAGGAAATCCCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTCAGAACCTTCATTGACAGGTCGAGAATCAGTCTGAGGAAATCCCA  150

seq1  TGTGGAATCTTCTTCTGGAGATGTAGAGATAGGGACAGCTGTCAAATCAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGAATCTTCTTCTGGAGATGTAGAGATAGGGACAGCTGTCAAATCAT  200

seq1  TAATCACATAATCAAACTCTCTCCCTTCTTTGGCGTACATCTTCAGTACT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCACATAATCAAACTCTCTCCCTTCTTTGGCGTACATCTTCAGTACT  250

seq1  GGGATACAGTCTTCTATAAGAACCTGATAGCAGTCTCCTCTAAGATTGTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATACAGTCTTCTATAAGAACCTGATAGCAGTCTCCTCTAAGATTGTC  300

seq1  TAAGACATCTCCACATGTTCTCCGCATGTATTTCTTACATCCATCAATTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGACATCTCCACATGTTCTCCGCATGTATTTCTTACATCCATCAATTA  350

seq1  CCATTTGGTCAATCTCTACCATAGTGACCATCTTTGGTTTCAGTTTGACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTTGGTCAATCTCTACCATAGTGACCATCTTTGGTTTCAGTTTGACA  400

seq1  ATTTCACACAATATGCCTCCATCGCCGCCTCCCAGAATCAGTACATCTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCACACAATATGCCTCCATCGCCGCCTCCCAGAATCAGTACATCTTT  450

seq1  GCCAGTGTAGTCTTCTTTACCACTGCCCATGATGGCACGGGTATATGCCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGTGTAGTCTTCTTTACCACTGCCCATGATGGCACGGGTATATGCCA  500

seq1  AGTCACTCTCTGCCAAATTAACATCCCCGCTGAGGATGAGAATATTCCCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCACTCTCTGCCAAATTAACATCCCCGCTGAGGATGAGAATATTCCCA  550

seq1  AACTGCTTCGAGTGTAGGATTTTGATGTTCTGATATGGTGAATCTTCATC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGCTTCGAGTGTAGGATTTTGATGTTCTGATATGGTGAATCTTCATC  600

seq1  ATACACCACTTCATCTATGTCATACTCAACCAGGCGCCCATCAGCAGTAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACACCACTTCATCTATGTCATACTCAACCAGGCGCCCATCAGCAGTAG  650

seq1  GCCAGTATCTGTCAATGGCCCCTCCGCGAACTATGGGTGGTAATCGCTTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGTATCTGTCAATGGCCCCTCCGCGAACTATGGGTGGTAATCGCTTC  700

seq1  ACCCGCCCAGTACTGTCTTGACTCAATTCTTTCATTTTTTCTTCTATTTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCGCCCAGTACTGTCTTGACTCAATTCTTTCATTTTTTCTTCTATTTT  750

seq1  GTTCAAAAGGCTGTCAGTTTCTTGTTTGCCTTGCACATCACTGTCGTAAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCAAAAGGCTGTCAGTTTCTTGTTTGCCTTGCACATCACTGTCGTAAC  800

seq1  TCTGAAGGTCCAGCAACACCAATCCATGTGGATAAATTCGCAAATTGGCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAAGGTCCAGCAACACCAATCCATGTGGATAAATTCGCAAATTGGCA  850

seq1  AAGCTGCCATTCTTGTTCGTGTAAGTTGCTAAATATCCATGGTCCTGCCA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTGCCATTCTTGTTCGTGTAAGTTGCTAAATATCCATGGTCCTGCCA  900

seq1  GGTGTGCAC-TGACTCTGTCATCCCCTGCTCCTGAAAAATGGACTGAAGG  949
       |||||||| |||||||||||| ||||||| ||| |||||||||||||||
seq2  -GTGTGCACTTGACTCTGTCAT-CCCTGCTTCTG-AAAATGGACTGAAGG  947

seq1  CCTTTCAGAATGGCCTCACCATCAGCTTTGGCGCCGAGCTTGAAGTCGAG  999
       ||||||||||||||||||||||| | |||||||||| ||||||||| | 
seq2  -CTTTCAGAATGGCCTCACCATCAAC-TTGGCGCCGAACTTGAAGTCAAA  995

seq1  CGTGCTGTGTCTTGCTGCTGCCATAGTGTGGCGAGGCC-CTGTGCCATGC  1048
      | || || ||| |||||||||| || || ||| ||||| ||||| |||||
seq2  C-TGTTG-GTC-TGCTGCTGCC-TATTGGGGC-AGGCCTCTGTG-CATGC  1039

seq1  CTGGGGAGGCGACCGCAGGA  1068
      |||||||||| |||||||||
seq2  CTGGGGAGGCAACCGCAGGA  1059