BAC Information

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BAC

Clone NameB6Ng01-057G07
ChromosomeX (Build37)
Map Location 151,828,037 - 151,829,065
singlet/doubletsinglet
Overlap genenone
Upstream geneEG434879, LOC667313, 4930542N07Rik, EG434881, LOC100040899, LOC667331, LOC100040925, LOC100040937, Magea6, Magea3, LOC626034, Magea8, Magea2, Magea5, Magea1, 1700042B14Rik, LOC245676, Amd-ps1, LOC667369, Sat1, Acot9, LOC667383, Prdx4
Downstream geneLOC667394, Ptchd1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-057G07.bB6Ng01-057G07.g
ACCDH879276DH879277
length9381,019
definitionDH879276|Mus musculus domesticus DNA, BAC clone: B6Ng01-057G07, 5' end.DH879277|Mus musculus domesticus DNA, BAC clone: B6Ng01-057G07, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctctatttagctctgtaccccatttttaaattgggttttttgaat
tgttggtgtcaaatttcttgagttctttatatattttggatattatctca
ttgtcaaatgtagggttggtgaagatcttttcccagtctgtagcctgctg
ttttgttctgttgacagtgtcctttgccttacagaagattttcagcctca
tgaggtcccacttattaattgttgatcttagagcctgagccattggtgtt
ctgttcaggaaaatttcccctgggccaatgcatttgaggctctttcccac
cttctcttcttttgtattcagcgtatctggttttatgttgagatctttga
ttcacttgaacttgagctttgttcaaggtgatacatatagatcaatttac
agtcttctgcacgcagacatcagtttgaccagcaccatttgttggaagat
gttctctttttccatttgtatggctttaacttctttgacaaaaatcaagt
gtccataggtgtgtggttttatttcagtgtctttaattctactccattga
tcaacctgtctgtttctgtaccagtaatatgcagttcttatcactattgc
tctgtagtacaggttttggtcagggatggtgattctaccagaggttcttt
tattgtttaggatggtttttgctatcctgggttttttgatttttcatatg
aacttgagaattactcttttgaggtctgtaaaaaatgtgttggagttttg
atgggaattgcattgaatctgtacattgcttttggtaaggtagccatttt
tcactatgttaatccaaccattgactatgttacaaccaatccacaagtat
gggagatctttccatattctgaggtctttttcgatttcgtcattagagat
tgaaattcttggatacaagtctctggttggtaaaataa
gaattccatatttgtctttttatttttcaaaatgtgtcactagaatcctt
taaattagatttatggctcaaattatatttctcttgggtaacagtgggct
acatgttattaaagcagcacacaaatgggatttaaaaatactaaagtgat
gagcttagtgtctgcttattactatggggaggcgttgcaatgtttgattc
tgataaccattcttactgctaaattacttgaatctagaaatagccttagg
ctgctagaatataaaaaaaaattcctggttccttgctttgtactggacac
taatgacaaattgctctcccaattttaaaagtaaggcctgtattagaatc
tttgaccatatgtacatttattaatgggactctagaagttctatactccc
attatttatatttatcagcattctgaaattataccctccttttgccactg
ttttaaatatgaaatctgggactggagagatgatataggaaagatgttct
tgaagaaagcatctcaattcaattcagcatgcttataactgcatgtcact
ccagcttcagagaatctgatgcctctgatctctttggatacctgcactca
catgcctatagtcacacacaatcacataagtgtaattcaaaacaaatgct
aaagaaagctttacaaaaatgaagagtacagggggctggagagatggccc
agcagttaagagccctgatctcttttttctgagaaccaggattcaattcc
ccacacccacatggcagctcacaactacctgtgatccaagatctgacatt
ctcttgtgaggctacatcaggccctagcaaacatagaagtggatgctcac
agtcagctattggatggatcacagggcccccaatggaggagctagagaaa
gtacccagtagctgaggggtctgcatcctatagtgacaacatataactac
cagtaccccagagctctgtcttagctgcatatgttaaaagtgcctactcg
gcatcatggaagaaggtcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_151828037_151829065
seq2: B6Ng01-057G07.g_72_1082 (reverse)

seq1  TTCCAATGATGGCCGAGTAGGCCATCTTCTGATACATATGCAGCTAGAGA  50
      |||| ||||| |||||||||||  | ||     ||||||||||||| |||
seq2  TTCC-ATGAT-GCCGAGTAGGCACTTTT----AACATATGCAGCTA-AGA  43

seq1  CATGAGCTCTGGGGGTACTGGTTAGTTTATATTGTTGTTCCACCTATAGG  100
      || ||||||| |||||||||| ||| ||||| ||||||  || ||||| |
seq2  CA-GAGCTCT-GGGGTACTGG-TAG-TTATA-TGTTGT--CA-CTATA-G  84

seq1  GTTGCAGACCCCTTCAGCTACTTGGGTACTTTCTCTAGCTCCTCCATTGG  150
      | |||||||||| |||||||| ||||||||||||||||||||||||||||
seq2  GATGCAGACCCC-TCAGCTAC-TGGGTACTTTCTCTAGCTCCTCCATTGG  132

seq1  GGGCCCTGTGATCCATCCAATAGCTGACTGTGAGCATCCACTTCTATGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCCCTGTGATCCATCCAATAGCTGACTGTGAGCATCCACTTCTATGTT  182

seq1  TGCTAGGCCCTGATGTAGCCTCACAAGAGAATGTCAGATCTTGGATCACA  250
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTAGGGCCTGATGTAGCCTCACAAGAGAATGTCAGATCTTGGATCACA  232

seq1  GGTAGTTGTGAGCTGCCATGTGGGTGTGGGGAATTGAATCCTGGTTCTCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAGTTGTGAGCTGCCATGTGGGTGTGGGGAATTGAATCCTGGTTCTCA  282

seq1  GAAAGAAGGGATCAGGGCTCTTAACTGCTGGGCCATCTCTCCAGCCCCCT  350
      |||| ||| |||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAAAGAGATCAGGGCTCTTAACTGCTGGGCCATCTCTCCAGCCCCCT  332

seq1  GTACTCTTCATTTTTGTAAAGCTTTCTTTAGCATTTGTTTTGAATTACAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTCTTCATTTTTGTAAAGCTTTCTTTAGCATTTGTTTTGAATTACAC  382

seq1  TTATGTGATTGTGTGTGACTATAGGCATGTGAGTGCAGGTATCCAAAGAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGTGATTGTGTGTGACTATAGGCATGTGAGTGCAGGTATCCAAAGAG  432

seq1  ATCAGAGGCATCAGATTCTCTGAAGCTGGAGTGACATGCAGTTATAAGCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGAGGCATCAGATTCTCTGAAGCTGGAGTGACATGCAGTTATAAGCA  482

seq1  TGCTGAATTGAATTGAGATGCTTTCTTCAAGAACATCTTTCCTATATCAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGAATTGAATTGAGATGCTTTCTTCAAGAACATCTTTCCTATATCAT  532

seq1  CTCTCCAGTCCCAGATTTCATATTTAAAACAGTGGCAAAAGGAGGGTATA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCCAGTCCCAGATTTCATATTTAAAACAGTGGCAAAAGGAGGGTATA  582

seq1  ATTTCAGAATGCTGATAAATATAAATAATGGGAGTATAGAACTTCTAGAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCAGAATGCTGATAAATATAAATAATGGGAGTATAGAACTTCTAGAG  632

seq1  TCCCATTAATAAATGTACATATGGTCAAAGATTCTAATACAGGCCTTACT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCATTAATAAATGTACATATGGTCAAAGATTCTAATACAGGCCTTACT  682

seq1  TTTAAAATTGGGAGAGCAATTTGTCATTAGTGTCCAGTACAAAGCAAGGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAAATTGGGAGAGCAATTTGTCATTAGTGTCCAGTACAAAGCAAGGA  732

seq1  ACCAGGAATTTTTTTTTATATTCTAGCAGCCTAAGGCTATTTCTAGATTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGGAATTTTTTTTTATATTCTAGCAGCCTAAGGCTATTTCTAGATTC  782

seq1  AAGTAATTTAGCAGTAAGAATGGTTATCAGAATCAAACATTGCAACGCCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTAATTTAGCAGTAAGAATGGTTATCAGAATCAAACATTGCAACGCCT  832

seq1  CCCCATAGTAATAAGCAGACACTAAGCTCATCACTTTAGTATTTTTAAAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCATAGTAATAAGCAGACACTAAGCTCATCACTTTAGTATTTTTAAAT  882

seq1  CCCATTTGTGTGCTGCTTTAATAACATGTAGCCCACTGTTACCCAAGAGA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATTTGTGTGCTGCTTTAATAACATGTAGCCCACTGTTACCCAAGAGA  932

seq1  AATATAATTTGAGCCATAAATCTAATTTAAAGGATTCTAGTGACACATTT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATAATTTGAGCCATAAATCTAATTTAAAGGATTCTAGTGACACATTT  982

seq1  TGAAAAATAAAAAGACAAATATGGAATTC  1029
      |||||||||||||||||||||||||||||
seq2  TGAAAAATAAAAAGACAAATATGGAATTC  1011