BAC Information

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BAC

Clone NameB6Ng01-057G11
ChromosomeX (Build37)
Map Location 126,613,533 - 126,727,806
singlet/doubletdoublet
Overlap geneDiap2
Upstream geneLOC100040550, LOC100040562, LOC100040570, LOC669120
Downstream geneLOC100040092, LOC665773, LOC665799
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-057G11.bB6Ng01-057G11.g
ACCDH879282DH879283
length1,0481,168
definitionDH879282|Mus musculus domesticus DNA, BAC clone: B6Ng01-057G11, 5' end.DH879283|Mus musculus domesticus DNA, BAC clone: B6Ng01-057G11, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(126,726,753 - 126,727,806)(126,613,533 - 126,614,723)
sequence
gaattcactgcctgtaccataaagtttcaaatggaagaaaatacaagggg
tgtttaatagaagcatatacctaaggtatattggaaactgataaataaag
agtcatctaccttatgaaaaaatactgatttgcctttctacattaagaaa
atagtgtatgcttgagagtttcctctaagagtatatttacagagacatac
tgatattactattctttcctataaaatctgagctttttaacaatacaaat
gctataaaaaattgataatatttgggacacatataaattaacataatact
aacaaattcctggatccatagtcacaatttatgatcctgtaaataaaaaa
aaatggttcatctttgtgtctatgaatagatacttatgtattatagtata
tgggaactatacacataactaaggtggacagtgtatttttcaagtatttt
tttctgttacttccacttaatatgaatgaattccatggaaaggattttaa
tctctcaaaatgtagcttctagtggcaaaaacggaaaaattgtcaggatg
agggaacattaactctttcagacaaattaagtcttgtttcatgttctgaa
aaagatgatttcccagacaagtctcctgtggcttgaacgggtttatgcac
cctttaaccagcaatatattattttctcaccattaccatcacgctccaaa
tgtctatcaaattccctggacaatgtttgaaaaatgaagttcatgctcag
tgtaattttagactgaatttcaaatgagcaaggctcatcaaacagagaag
ttttgtgcacacagattccccaaagcataggctccattcaaagagttcct
tagaactaggcaatttctacagaagacttggcaaagtcttaattttaata
caggcactttaaaatcaaaacatagtaaaagactaacattaatgtagtat
taggtccttctttgggcaaccagaaggcccccagaaataaaaagtaaaaa
tcctcaatttcttgcccgagtgttaagttctattatttatagtaaact
gaattcccattaatatataaccccctagataaaatggagtctcatcaact
agggaaagatgagtgtcatacatgagattagttctttgatattgattaaa
atattactacctataagaaacaatgaaatccacaaaacggtagatatgtt
ttcacggatataaaataaaacttacctgagtcagaccctgtgttgtgagc
ttctctaaccttttgtttttctgaactgtcacaaccttgggcttgcatat
aatcacttgtaatcaactgggaggaaaaaaaaaaaggaagggattaaact
gaaacaaacaaaatcaagcaggagaccttccctctgtggaggcagacctc
ccagctagagggacatgctccttcctataccttctgtgatcaataatctt
catctttaaaggaatggattggctgcattgcttcccactgacttgtcctt
caacctacctcctacggaattgaatttggtacacacattgtaattatgtg
ctgtacctttactggaagaacagtacagatctttgaaagctctgacagtc
agaacccccagctggagcttttagatgcttccgagtgtgtttgcagctca
gctgctctcaaacctcagagctatggaaattcccacttgtcttgcactgg
ggacggaggcccatactgtgtatatctattaaactagcatgtctttcgga
ggaaagaaggcaataattagttctcttagtaatcagtacttttgtttttc
tgacttcaaaattacccatatttttcaattaaaaacattctcaagctata
atctagagggaaaaagatgttttgatagcttcgtagttgtaaatcattaa
tgaacagaacagattatgtgatattactgacagaacaatgctattttttt
cttacttcttctgcacaaataaatgaaggaaaagaagaattagaactgca
actataagcaacttttgctttattgtttaaagactgaaaaaaacctacga
cccttataaagaagctctaccaggtgaaaagaggactgggaaaagcttcc
attcccctctttattatatccaaagcagtagtttgaaggaaatggaggtt
tgagaataactcattctcgcgttggctttccttagagaagatccattttc
tccttttctggaaatctg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_126726753_126727806
seq2: B6Ng01-057G11.b_44_1091 (reverse)

seq1  AGTTTACTATATAATTATATGAAACTTAACACTCTGGCAAGGAAATGGAG  50
      ||||||||||| ||| |||   |||||||||||| ||||| ||||| |||
seq2  AGTTTACTATA-AATAATA--GAACTTAACACTCGGGCAA-GAAATTGAG  46

seq1  AATATTAACTTTTTA-TTCTGGGGTGGCCTCTGTTTGCCCAAAGAAGGAC  99
       || || |||||||| |||||||| | | |||| ||||||||||||||| 
seq2  GATTTTTACTTTTTATTTCTGGGG-GCCTTCTGGTTGCCCAAAGAAGGA-  94

seq1  CCTAATACCTACA-TAATGTTAGTCTTTTACTATGTTTTGATTTTAAAGT  148
      ||||||| ||||| ||||||||||||||||||||||||||||||||||||
seq2  CCTAATA-CTACATTAATGTTAGTCTTTTACTATGTTTTGATTTTAAAGT  143

seq1  GCCTGTATTAAAAATTAAGACTTTGCCAAGTCTTCTGTAGAAATTGCCTA  198
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGTATT-AAAATTAAGACTTTGCCAAGTCTTCTGTAGAAATTGCCTA  192

seq1  GTTCTAAGGAACTCTTTGAATGGAGCCTATGCTTTGGGGAATCTGTGTGC  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTAAGGAACTCTTTGAATGGAGCCTATGCTTTGGGGAATCTGTGTGC  242

seq1  ACAAAACTTCTCTGTTTGATGAGCCTTGCTCATTTGAAATTCAGTCTAAA  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAACTTCTCTGTTTGATGAGCCTTGCTCATTTGAAATTCAGTCTAAA  292

seq1  ATTACACTGAGCATGAACTTCATTTTTCAAACATTGTCCAGGGAATTTGA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACACTGAGCATGAACTTCATTTTTCAAACATTGTCCAGGGAATTTGA  342

seq1  TAGACATTTGGAGCGTGATGGTAATGGTGAGAAAATAATATATTGCTGGT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGACATTTGGAGCGTGATGGTAATGGTGAGAAAATAATATATTGCTGGT  392

seq1  TAAAGGGTGCATAAACCCGTTCAAGCCACAGGAGACTTGTCTGGGAAATC  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGGGTGCATAAACCCGTTCAAGCCACAGGAGACTTGTCTGGGAAATC  442

seq1  ATCTTTTTCAGAACATGAAACAAGACTTAATTTGTCTGAAAGAGTTAATG  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTTTTCAGAACATGAAACAAGACTTAATTTGTCTGAAAGAGTTAATG  492

seq1  TTCCCTCATCCTGACAATTTTTCCGTTTTTGCCACTAGAAGCTACATTTT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCTCATCCTGACAATTTTTCCGTTTTTGCCACTAGAAGCTACATTTT  542

seq1  GAGAGATTAAAATCCTTTCCATGGAATTCATTCATATTAAGTGGAAGTAA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGATTAAAATCCTTTCCATGGAATTCATTCATATTAAGTGGAAGTAA  592

seq1  CAGAAAAAAATACTTGAAAAATACACTGTCCACCTTAGTTATGTGTATAG  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAAAAAATACTTGAAAAATACACTGTCCACCTTAGTTATGTGTATAG  642

seq1  TTCCCATATACTATAATACATAAGTATCTATTCATAGACACAAAGATGAA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCATATACTATAATACATAAGTATCTATTCATAGACACAAAGATGAA  692

seq1  CCATTTTTTTTTATTTACAGGATCATAAATTGTGACTATGGATCCAGGAA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTTTTTTTTATTTACAGGATCATAAATTGTGACTATGGATCCAGGAA  742

seq1  TTTGTTAGTATTATGTTAATTTATATGTGTCCCAAATATTATCAATTTTT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTAGTATTATGTTAATTTATATGTGTCCCAAATATTATCAATTTTT  792

seq1  TATAGCATTTGTATTGTTAAAAAGCTCAGATTTTATAGGAAAGAATAGTA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGCATTTGTATTGTTAAAAAGCTCAGATTTTATAGGAAAGAATAGTA  842

seq1  ATATCAGTATGTCTCTGTAAATATACTCTTAGAGGAAACTCTCAAGCATA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCAGTATGTCTCTGTAAATATACTCTTAGAGGAAACTCTCAAGCATA  892

seq1  CACTATTTTCTTAATGTAGAAAGGCAAATCAGTATTTTTTCATAAGGTAG  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTATTTTCTTAATGTAGAAAGGCAAATCAGTATTTTTTCATAAGGTAG  942

seq1  ATGACTCTTTATTTATCAGTTTCCAATATACCTTAGGTATATGCTTCTAT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACTCTTTATTTATCAGTTTCCAATATACCTTAGGTATATGCTTCTAT  992

seq1  TAAACACCCCTTGTATTTTCTTCCATTTGAAACTTTATGGTACAGGCAGT  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACACCCCTTGTATTTTCTTCCATTTGAAACTTTATGGTACAGGCAGT  1042

seq1  GAATTC  1054
      ||||||
seq2  GAATTC  1048

seq1: chrX_126613533_126614723
seq2: B6Ng01-057G11.g_68_1235

seq1  GAATTCCCATTAATATATAACCCCCTAGATAAAATGGAGTCTCATCAACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCATTAATATATAACCCCCTAGATAAAATGGAGTCTCATCAACT  50

seq1  AGGGAAAGATGAGTGTCATACATGAGATTAGTTCTTTGATATTGATTAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGAAAGATGAGTGTCATACATGAGATTAGTTCTTTGATATTGATTAAA  100

seq1  ATATTACTACCTATAAGAAACAATGAAATCCACAAAACGGTAGATATGTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTACTACCTATAAGAAACAATGAAATCCACAAAACGGTAGATATGTT  150

seq1  TTCACGGATATAAAATAAAACTTACCTGAGTCAGACCCTGTGTTGTGAGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACGGATATAAAATAAAACTTACCTGAGTCAGACCCTGTGTTGTGAGC  200

seq1  TTCTCTAACCTTTTGTTTTTCTGAACTGTCACAACCTTGGGCTTGCATAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTAACCTTTTGTTTTTCTGAACTGTCACAACCTTGGGCTTGCATAT  250

seq1  AATCACTTGTAATCAACTGGGAGGAAAAAAAAAAAGGAAGGGATTAAACT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCACTTGTAATCAACTGGGAGGAAAAAAAAAAAGGAAGGGATTAAACT  300

seq1  GAAACAAACAAAATCAAGCAGGAGACCTTCCCTCTGTGGAGGCAGACCTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACAAACAAAATCAAGCAGGAGACCTTCCCTCTGTGGAGGCAGACCTC  350

seq1  CCAGCTAGAGGGACATGCTCCTTCCTATACCTTCTGTGATCAATAATCTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCTAGAGGGACATGCTCCTTCCTATACCTTCTGTGATCAATAATCTT  400

seq1  CATCTTTAAAGGAATGGATTGGCTGCATTGCTTCCCACTGACTTGTCCTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTTTAAAGGAATGGATTGGCTGCATTGCTTCCCACTGACTTGTCCTT  450

seq1  CAACCTACCTCCTACGGAATTGAATTTGGTACACACATTGTAATTATGTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACCTACCTCCTACGGAATTGAATTTGGTACACACATTGTAATTATGTG  500

seq1  CTGTACCTTTACTGGAAGAACAGTACAGATCTTTGAAAGCTCTGACAGTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTACCTTTACTGGAAGAACAGTACAGATCTTTGAAAGCTCTGACAGTC  550

seq1  AGAACCCCCAGCTGGAGCTTTTAGATGCTTCCGAGTGTGTTTGCAGCTCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACCCCCAGCTGGAGCTTTTAGATGCTTCCGAGTGTGTTTGCAGCTCA  600

seq1  GCTGCTCTCAAACCTCAGAGCTATGGAAATTCCCACTTGTCTTGCACTGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGCTCTCAAACCTCAGAGCTATGGAAATTCCCACTTGTCTTGCACTGG  650

seq1  GGACGGAGGCCCATACTGTGTATATCTATTAAACTAGCATGTC-TTCGGA  699
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  GGACGGAGGCCCATACTGTGTATATCTATTAAACTAGCATGTCTTTCGGA  700

seq1  GGAAAGAAGGCAATAATTAGTTCTCTTAGTAATCAGTACTTTTGTTTTTC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAGAAGGCAATAATTAGTTCTCTTAGTAATCAGTACTTTTGTTTTTC  750

seq1  TGACTTCAAAATTACCCATATTTTTCAATTAAAAACATTCTCAAGCTATA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTTCAAAATTACCCATATTTTTCAATTAAAAACATTCTCAAGCTATA  800

seq1  ATCTAGAGGGAAAAAGATGTTTTGATAGCTTCGTAGTTGTAAATCATTAA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTAGAGGGAAAAAGATGTTTTGATAGCTTCGTAGTTGTAAATCATTAA  850

seq1  TGAACAGAACAGATTATGTGATATTACTGACAGAACAATGCTATTTTTTT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACAGAACAGATTATGTGATATTACTGACAGAACAATGCTATTTTTTT  900

seq1  CTTACTTCTTCTGCACAAATAAATGAAGGAAAAAGAAGAATTAGAACTGC  949
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  CTTACTTCTTCTGCACAAATAAATGAAGG-AAAAGAAGAATTAGAACTGC  949

seq1  AACTATAAGCAACTTTTGCTTTAATTGTTTTAAAGACTGAAAAAAGAGCT  999
      |||||||||||||||||||||| |||| ||||||||||||||||  | | 
seq2  AACTATAAGCAACTTTTGCTTT-ATTG-TTTAAAGACTGAAAAA--AACC  995

seq1  TACAGACCCTAATAAAGAAAGCTTAACCAGGTGAAAAGGAGACTGGTAAA  1049
      ||| |||||| |||||| |||||  |||||||||||||  ||||||  ||
seq2  TAC-GACCCTTATAAAG-AAGCTCTACCAGGTGAAAAGAGGACTGG-GAA  1042

seq1  AAGCTTCCATCCCCCTCTTTATTATATCAAAAGCAAGTAGTTTAGAAGGA  1099
      |||||||||| ||||||||||||||||| ||||| |||||||| ||||||
seq2  AAGCTTCCATTCCCCTCTTTATTATATCCAAAGC-AGTAGTTT-GAAGGA  1090

seq1  AAATTGTAGGTTTTGTAAGTATTACATCATTTTCTGCGTTTGCATATTCA  1149
      ||  || |||||   | || || || ||||| || ||||| ||   ||| 
seq2  AA--TGGAGGTT---TGAGAATAAC-TCATTCTC-GCGTTGGC--TTTCC  1131

seq1  TTAGAAAAAAATCACATTTTTCTTCATTTTGCTGGAAATCTG  1191
      ||||| || |  ||   |||||| |  ||| |||||||||||
seq2  TTAGAGAAGATCCA---TTTTCTCC--TTTTCTGGAAATCTG  1168