BAC Information

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BAC

Clone NameB6Ng01-060K13
ChromosomeX (Build37)
Map Location 67,077,512 - 67,078,633
singlet/doubletsinglet
Overlap geneAff2
Upstream geneLOC100040244, EG627927, LOC666882, LOC671950, LOC100040255, EG666577
Downstream gene1700020N15Rik, Ids, 1110012L19Rik, 4930567H17Rik, LOC100040304, LOC628002, LOC628012, BC023829, EG547447, LOC666981, LOC100040409, LOC628053, LOC100040432, EG280121, LOC666993
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-060K13.bB6Ng01-060K13.g
ACCDH881569DH881570
length1,2151,106
definitionDH881569|Mus musculus domesticus DNA, BAC clone: B6Ng01-060K13, 5' end.DH881570|Mus musculus domesticus DNA, BAC clone: B6Ng01-060K13, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcagttggaattttgatagggattgcactgaatctgtagattgctt
ttggcaagatggccatttttactgtattaatcctgccaatccatgatctt
tccctcttctggggtcttctttgatttctttcttcagagacttgaaattc
ttgtcatacagaactttcatttgcttggttagagtcacacataggtattt
tatattatttgggactattgtgaaggttgtccttttctctattttctttt
tcagtcagtttttcctttgaatagaggaaggctactgttttgtttgaatt
aattttatatccagccactttgctgaagttgtttattaggtttaagagtt
ttctagtggaatatttagggtcacttaaatgtactatcatataatctgct
aatagtgttattttaacttcttttccaatttatatccctttgacctcctt
ttgtagtctaattgctctagcgtgaacttcaattactatattgaatacat
agggtgatagtgggcagccttgtctagtcccttattttagttggattgct
tccagcttctctccatttagtttgattttggctactggtttgctgtatat
tgcttttattatgtttatgtatgggccttgagttccttatctttccaagg
cttttaacatgaagggatattaaattttttcaaattttttaaagcatcta
atgtgttttttctttgaatttgtttatgtagtggaatatgttgatggatt
tccatgtattgaaccatccctgcatccccaagatgaaacctacttgatca
tggtgaatgatcattttgatgcattatgggattcagtttttgaagtcttc
ttgcatatttttgcatcgatgttcataagggatctggtctgaagttctct
ttctttgttgggctttgtgtgacttagttatagattaattgtgccttcat
agatgaatgaacagtttccttctgttctatttcgggaatagttggagagt
attggtatagtcctccttgagggctgatgaactctggactactcactggg
tctgggctctttgtaggacttaagacgcttttttaggtaccactggatat
ctaatataaagtgccattcctctgattccatgtgaataggctttgatgga
atcaagattccgtattccagttggggaggctcgattcatttcagatttgg
attgagacaactcgg
gaattcactgtttgtattttttgttaagtttctaaagtattattcatgtt
gctattgttggatagtgagcatccatattcatagctgtaaaatggaagcg
gtatagtgtgtaagtgttggcatgcactaaaagggatacagggaaatttc
gataaatattggtgcagatataggcctaaagaaaattccaaactgaagtc
ccttcttattagaaggtgtccaataaaaactcttcaatgactgcttaaag
aaagcttaaaggggtgggggaaaagcaaagagaggctaaaaaaacaactc
ggtaagtaaagtatttggtatacaagcataagatgctgagtttggatata
tagcagctacagaaaaagctgggtatagtggaatacagtgtgtatctcca
atccctatgcttaggcaactgtgcaagggttgagacaaagacaggtactt
agatctgtagagcccactgcccagggtagctgtctagccaagtaaactac
ttttgggtttaatgatataccctgatagagagcaatgaaggacagccagt
gctaaactctggcctctacatgtgcaaacatgggtttcacccacccacat
gcgtgtatgcacccacacacaccctaacataagagcttaaattttagcat
atataataaattacagcaaacagccagctttttgttattaatggtggaaa
aaataattatggaaatgcatatgataccaacattgtgttttagcatatat
ttttcaaatttgtaacacattattttatttttcttccaatagcttatttc
atgattagccatgagtagattttagcctttgctgatcttcatggagtcca
ccagcagtatagatattattgggattccattagaaatgtagaaatcagat
cctgtcctcagcttccttaaatagaatctgacacactaacaagggtctcg
ggtgattctcatacacataaagttgagatacactagttaaaagaattata
tatagtacatatatatatgtaatatatatctccaaatgctcaattgtctc
tttaatctatgtatatatatctcactacaataaaatgtgagacttatggt
tgagtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_67077512_67078633
seq2: B6Ng01-060K13.g_67_1172

seq1  GAATTCACTGTTTGTATTTTTTGTTAAGTTTCTAAAGTATTATTCATGTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTGTTTGTATTTTTTGTTAAGTTTCTAAAGTATTATTCATGTT  50

seq1  GCTATTGTTGGATAGTGAGCATCCATATTCATAGCTGTAAAATGGAAGCG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTATTGTTGGATAGTGAGCATCCATATTCATAGCTGTAAAATGGAAGCG  100

seq1  GTATAGTGTGTAAGTGTTGGCATGCACTAAAAGGGATACAGGGAAATTTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATAGTGTGTAAGTGTTGGCATGCACTAAAAGGGATACAGGGAAATTTC  150

seq1  GATAAATATTGGTGCAGATATAGGCCTAAAGAAAATTCCAAACTGAAGTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAAATATTGGTGCAGATATAGGCCTAAAGAAAATTCCAAACTGAAGTC  200

seq1  CCTTCTTATTAGAAGGTGTCCAATAAAAACTCTTCAATGACTGCTTAAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCTTATTAGAAGGTGTCCAATAAAAACTCTTCAATGACTGCTTAAAG  250

seq1  AAAGCTTAAAGGGGTGGGGGAAAAGCAAAGAGAGGCTAAAAAAACAACTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCTTAAAGGGGTGGGGGAAAAGCAAAGAGAGGCTAAAAAAACAACTC  300

seq1  GGTAAGTAAAGTATTTGGTATACAAGCATAAGATGCTGAGTTTGGATATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAAGTAAAGTATTTGGTATACAAGCATAAGATGCTGAGTTTGGATATA  350

seq1  TAGCAGCTACAGAAAAAGCTGGGTATAGTGGAATACAGTGTGTATCTCCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCAGCTACAGAAAAAGCTGGGTATAGTGGAATACAGTGTGTATCTCCA  400

seq1  ATCCCTATGCTTAGGCAACTGTGCAAGGGTTGAGACAAAGACAGGTACTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCTATGCTTAGGCAACTGTGCAAGGGTTGAGACAAAGACAGGTACTT  450

seq1  AGATCTGTAGAGCCCACTGCCCAGGGTAGCTGTCTAGCCAAGTAAACTAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCTGTAGAGCCCACTGCCCAGGGTAGCTGTCTAGCCAAGTAAACTAC  500

seq1  TTTTGGGTTTAATGATATACCCTGATAGAGAGCAATGAAGGACAGCCAGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGGGTTTAATGATATACCCTGATAGAGAGCAATGAAGGACAGCCAGT  550

seq1  GCTAAACTCTGGCCTCTACATGTGCAAACATGGGTTTCACCCACCCACAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAAACTCTGGCCTCTACATGTGCAAACATGGGTTTCACCCACCCACAT  600

seq1  GCGTGTATGCACCCACACACACCCTAACATAAGAGCTTAAATTTTAGCAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGTGTATGCACCCACACACACCCTAACATAAGAGCTTAAATTTTAGCAT  650

seq1  ATATAATAAATTACAGCAAACAGCCAGCTTTTTGTTATTAATGGTGGAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAATAAATTACAGCAAACAGCCAGCTTTTTGTTATTAATGGTGGAAA  700

seq1  AAATAATTATGGAAATGCATATGATACCAACATTGTGTTTTAGCATATAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAATTATGGAAATGCATATGATACCAACATTGTGTTTTAGCATATAT  750

seq1  TTTTCAAATTTGTAACACATTATTTTATTTTTCTTCCAATAGCTTATTTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCAAATTTGTAACACATTATTTTATTTTTCTTCCAATAGCTTATTTC  800

seq1  ATGATTAGCCATGAGTAGATTTTAGCC-TTGCTGATCTCCATGGAGTCCA  849
      ||||||||||||||||||||||||||| |||||||||| |||||||||||
seq2  ATGATTAGCCATGAGTAGATTTTAGCCTTTGCTGATCTTCATGGAGTCCA  850

seq1  CCAGCAGTATAGATATCATTGGGATTCCATTAGAAATGTAGAAATCAGAT  899
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  CCAGCAGTATAGATATTATTGGGATTCCATTAGAAATGTAGAAATCAGAT  900

seq1  CCTG-CCTCAGGCTTCCTTAAATAGAATCTGACACACTAACAA-GGTCTC  947
      |||| ||||| |||||||||||||||||||||||||||||||| ||||| 
seq2  CCTGTCCTCA-GCTTCCTTAAATAGAATCTGACACACTAACAAGGGTCT-  948

seq1  CGGGTGATTCCCATACACAATAAAGTTTGAGATACACTAGTTAAAAGAAT  997
      |||||||||| ||||||| |||||| ||||||||||||||||||||||||
seq2  CGGGTGATTCTCATACAC-ATAAAG-TTGAGATACACTAGTTAAAAGAAT  996

seq1  TATATATATTACATATAATATATGTTATATTATATCTCCCAAATGCTCAC  1047
      |||||||| ||||||| |||||||| ||| ||||||| ||||||||||| 
seq2  TATATATAGTACATAT-ATATATGTAATA-TATATCT-CCAAATGCTCA-  1042

seq1  ATTGTCCTCTTTAAAATCTATGTAGTATATTATCCTCAACTTACAGATAA  1097
      ||||| ||||||  |||||||||| |||| ||| ||||   |||| || |
seq2  ATTGT-CTCTTT--AATCTATGTA-TATA-TAT-CTCA--CTACA-AT-A  1082

seq1  AAATGTGAGACTTAATGGTTGAGTG  1122
      ||||||||||||| |||||||||||
seq2  AAATGTGAGACTT-ATGGTTGAGTG  1106