BAC Information

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BAC

Clone NameB6Ng01-062C16
ChromosomeX (Build37)
Map Location 152,792,346 - 152,793,533
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC667394, Ptchd1
Downstream gene4930503H13Rik, LOC640803, LOC434885, Phex
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-062C16.bB6Ng01-062C16.g
ACCDH882646DH882647
length1,2561,179
definitionDH882646|Mus musculus domesticus DNA, BAC clone: B6Ng01-062C16, 5' end.DH882647|Mus musculus domesticus DNA, BAC clone: B6Ng01-062C16, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgtttagcattgtacctatttttaacagggttatttggttct
ttggagtctaacttcttcagttctttgtacatatttgatattagccatcc
attgtatttaggataggtaaagatctttccccaatctgttggttgccatt
ttgtcttattgacagttttctatgccttacagaaggtttgcaagtttatg
agatcccatttgtctttgtcgatacttgatcttatagcacaggccattag
atttctgttctggaaattttcccctgtgcccatatatttgaggatctccc
caacattttcttctataagtttcagtgattctggttttttgtggaggtcc
ttgatccacttggacttgagctttgtacaaggagaggagaagggataaat
atgcatttttctacatcctaaccaccagttgaactagcactttttgttga
aaaagctgtctttttttccactgggtggttttagttcctttgtcaaagat
aaagtgaccataggtgtgtgggttaatttctggttcttcaattctgttaa
attgatccacttgcatttttttgtttgtttgtttatttgtttgtttttta
atttatcacaattgctctttattacagcttgaggtcagggatggtgattc
caccagtgattttgtttgtttgtttttgtttttgtttttgtttttgtttt
tgtttttgtttttgtttttgttttaattgttgagaatagttttcactatc
ctaggttttttattattccaaatgaatttgcaaattggtctttctcactc
tgtgaagaagggatttggaatttttatggggattacattgaatctgtaga
ttgttttcggcaagatggccattttttctatattaattctgccattccat
gagcatgtaagatctttccatttttctgagattttcttcagtttctttct
tcagagacttggaggttcttatcaaaaagaactgccacttcttggtaggg
ttatatcaaggtatttttatataatttgtgataatgggaagggggtattt
ccctatgatcttatcatgtgtttatcctttggtgagtgagtcactgattg
tgagtattaatcagctactcgatgaagtgttatacggttagagttctgcg
atttggagactagtaatatcataatcgaacgaatttgacttctcaattac
tgatctatgtagctcagatgctacttaactagaggacgactgatatgagt
tgatat
gaattcacagaactctctcagttattgcctctgcctcctgactgctgtga
ttaaatacgtgaaccaccatgctcagaatattccatgtttatgatgaaca
gaggataatcactgatgattaaagcatcgctatactgctaagatgaaata
tcagaagtcttgaggattaaaagagtttttgagagaccaatagtgataga
tatatgattttatgtagataaggttgaatacagcaaaaaagacattctaa
tgtgtcatagtctgctctctggggaagttagtggaggctagaaaagtttt
gaagagacaggagggaaagagctgaagggtgaagaagagatcttacctga
tgatgttttctatactaggtattttagtacttttgtaatttcatggctga
atattaagtctggaagatgcttagtaatcatttgacctttttaggtgatt
tataatgaaataactaaagaaattaaatggcaagctcagacaagagaaac
ccctgctttataagtcaacatattgccacctggtttagtgcactttgtga
aggtaatgcttatggcacagtgtactctatctagctcacactttgttaac
ataaacctgaaagacctataacttctatctgcatctacttgtggtctaga
taaactgtagaagatctcctcaacaagatagaagcaaggaagtgatcaaa
gatgcatatttctgagaatgcataggatgtagtttaagactcataaaacg
ttctaacgtaaacctcaatatttaaagaacatttattcattgtgttattt
agtacagaatcactaaaatttttccttataagtttactttacttctggat
ttaaaattcctttaaaggtagaggaattctacatgttgtatttttatcat
tagtgagtctatgttagacatttcatacatattatgcacaaatgtagaaa
catttgaatcagtcttttcaaaggcaaggttttaaacattgtattcaact
actccttaaaatattgggtgaaactaattaagttccatttaggtatcttt
atcctcactgaatgaattgaatgcttacttctaattccacgagataggca
ttaaaaatgaagccaaataaactcttacgtacttcaacttcattaatttt
aagtttcttgtcattaaagaattcttaca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_152792346_152793533
seq2: B6Ng01-062C16.g_68_1246 (reverse)

seq1  TGTAAGAAATTCTTTTATTAGCAGAAACTTATAAATTAATGTAGTTGACA  50
      |||||| |||||||| || |  ||||||||| ||||||||| |||||| |
seq2  TGTAAG-AATTCTTTAATGACAAGAAACTTA-AAATTAATGAAGTTGA-A  47

seq1  GTACTGTAAGAGTTTTATCTGGCTTCATTTTTAATG-CTATCTCGGTGCA  99
      |||| ||||||| ||||| ||||||||||||||||| ||||||| ||| |
seq2  GTAC-GTAAGAG-TTTATTTGGCTTCATTTTTAATGCCTATCTC-GTGGA  94

seq1  TTTAGAAGTAGCAATTCAAATCATTCAGTGAGGAT-AAGGTACCTAAATG  148
       |||||||||   |||||| ||||||||||||||| ||| ||||||||||
seq2  ATTAGAAGTAAGCATTCAATTCATTCAGTGAGGATAAAGATACCTAAATG  144

seq1  TGAACTTAATTAGTTTTCACACAATATTTTTAAGGGGTAGTTGAATTACA  198
       |||||||||||| |||||| ||||| |||||||| ||||||||| ||| 
seq2  -GAACTTAATTAG-TTTCACCCAATA-TTTTAAGGAGTAGTTGAA-TAC-  189

seq1  AATGTTTAAAACCTTGCCTTTGGAAAGACTGATTCAAAGTGTTTCTACAT  248
      |||||||||||||||||||||| ||||||||||||||| |||||||||||
seq2  AATGTTTAAAACCTTGCCTTTGAAAAGACTGATTCAAA-TGTTTCTACAT  238

seq1  TTGTGCATTAATATGTATGAATTGTCTAACATAGACTCACTAATGATAAA  298
      ||||||| ||||||||||||| ||||||||||||||||||||||||||||
seq2  TTGTGCA-TAATATGTATGAAATGTCTAACATAGACTCACTAATGATAAA  287

seq1  AATACAACATGTAGAATTCCTCTACCTTTAAAGG-ATTTTAAATCCAGAA  347
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  AATACAACATGTAGAATTCCTCTACCTTTAAAGGAATTTTAAATCCAGAA  337

seq1  GTAAAGTAAACTTATAAGG-AAAATTTTAGTGATTCTGTACTAAATAACA  396
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  GTAAAGTAAACTTATAAGGAAAAATTTTAGTGATTCTGTACTAAATAACA  387

seq1  CAATGAATAAATGTTCTTTAAATATTGAGGTTTACGTTAGAACGTTTTAT  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGAATAAATGTTCTTTAAATATTGAGGTTTACGTTAGAACGTTTTAT  437

seq1  GAGTCTTAAACTACATCCTATGCATTCTCAGAAATATGCATCTTTGATCA  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTCTTAAACTACATCCTATGCATTCTCAGAAATATGCATCTTTGATCA  487

seq1  CTTCCTTGCTTCTATCTTGTTGAGGAGATCTTCTACAGTTTATCTAGACC  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCTTGCTTCTATCTTGTTGAGGAGATCTTCTACAGTTTATCTAGACC  537

seq1  ACAAGTAGATGCAGATAGAAGTTATAGGTCTTTCAGGTTTATGTTAACAA  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGTAGATGCAGATAGAAGTTATAGGTCTTTCAGGTTTATGTTAACAA  587

seq1  AGTGTGAGCTAGATAGAGTACACTGTGCCATAAGCATTACCTTCACAAAG  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTGAGCTAGATAGAGTACACTGTGCCATAAGCATTACCTTCACAAAG  637

seq1  TGCACTAAACCAGGTGGCAATATGTTGACTTATAAAGCAGGGGTTTCTCT  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACTAAACCAGGTGGCAATATGTTGACTTATAAAGCAGGGGTTTCTCT  687

seq1  TGTCTGAGCTTGCCATTTAATTTCTTTAGTTATTTCATTATAAATCACCT  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTGAGCTTGCCATTTAATTTCTTTAGTTATTTCATTATAAATCACCT  737

seq1  AAAAAGGTCAAATGATTACTAAGCATCTTCCAGACTTAATATTCAGCCAT  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAGGTCAAATGATTACTAAGCATCTTCCAGACTTAATATTCAGCCAT  787

seq1  GAAATTACAAAAGTACTAAAATACCTAGTATAGAAAACATCATCAGGTAA  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATTACAAAAGTACTAAAATACCTAGTATAGAAAACATCATCAGGTAA  837

seq1  GATCTCTTCTTCACCCTTCAGCTCTTTCCCTCCTGTCTCTTCAAAACTTT  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTCTTCTTCACCCTTCAGCTCTTTCCCTCCTGTCTCTTCAAAACTTT  887

seq1  TCTAGCCTCCACTAACTTCCCCAGAGAGCAGACTATGACACATTAGAATG  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGCCTCCACTAACTTCCCCAGAGAGCAGACTATGACACATTAGAATG  937

seq1  TCTTTTTTGCTGTATTCAACCTTATCTACATAAAATCATATATCTATCAC  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTTTGCTGTATTCAACCTTATCTACATAAAATCATATATCTATCAC  987

seq1  TATTGGTCTCTCAAAAACTCTTTTAATCCTCAAGACTTCTGATATTTCAT  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGGTCTCTCAAAAACTCTTTTAATCCTCAAGACTTCTGATATTTCAT  1037

seq1  CTTAGCAGTATAGCGATGCTTTAATCATCAGTGATTATCCTCTGTTCATC  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGCAGTATAGCGATGCTTTAATCATCAGTGATTATCCTCTGTTCATC  1087

seq1  ATAAACATGGAATATTCTGAGCATGGTGGTTCACGTATTTAATCACAGCA  1146
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAACATGGAATATTCTGAGCATGGTGGTTCACGTATTTAATCACAGCA  1137

seq1  GTCAGGAGGCAGAGGCAATAACTGAGAGAGTTCTGTGAATTC  1188
      ||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGGAGGCAGAGGCAATAACTGAGAGAGTTCTGTGAATTC  1179