BAC Information

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BAC

Clone NameB6Ng01-063A14
ChromosomeX (Build37)
Map Location 97,989,026 - 98,107,103
singlet/doubletdoublet
Overlap geneDlg3, Tex11
Upstream genePcna-ps1, EG620592, Eda, Dgat2l4, Otud6a, Igbp1, LOC668257, Dgat2l3, LOC620734, P2ry4, Arr3, Pdzd11, Kif4, Gdpd2
Downstream geneLOC668271, LOC100042392, Slc7a3, Snx12, Mllt7, Gm614, Il2rg, Med12, Nlgn3, LOC100042407, Gjb1, Zmym3, Nono, Itgb1bp2, LOC620837, Taf1, Ogt, LOC620865, LOC668291, Cxcr3, LOC632454, LOC668302, EG212753, 8030474K03Rik, LOC668308, LOC100042465, H3f3a-ps1, EG621083
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-063A14.bB6Ng01-063A14.g
ACCDH883255DH883256
length1,1581,063
definitionDH883255|Mus musculus domesticus DNA, BAC clone: B6Ng01-063A14, 5' end.DH883256|Mus musculus domesticus DNA, BAC clone: B6Ng01-063A14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(98,105,936 - 98,107,103)(97,989,026 - 97,990,090)
sequence
gaattcttccactggtatgtttaaactggagtgtctgtggaggtaaaatg
ctagaaagaggctattagatgtgaacaggaaagagaaacctcaaggaagg
agattagcaggatacatgtgatatgaaggcagaggagggaaatggggtga
ggatcaggacatcggggaaagaattaaccaaaactaaagatgggtgagaa
agtcctgtgaaaccctaccattttataagttaatggaaatgagtacaggc
atcttgcatgggtggctaatgctcctcccagaagccaaattaaatgaaag
tctcagtaccaggtttgggatacctccctatgagctgttggtaaagaaga
ctatagaatcccccagaacaatacaggttagtgccaacatcattttttgc
ctgccagaactagatcattgctaaagacaccacacttgggttgttctatt
tggccaccaaattaaatagtgaaacagtcaactatacctcagttgaaatt
cacactaaaagaagttgacaagtagtcactacatgaatttgtaatttcct
ttaatgttcatccctgcaaagagatcaatcacaaagttgaaactagtctg
agctacgtagtgagttcgcgccaggatgaagaacataaggggagccttaa
tgaacagggaggaggaagaggaagagataatctattactgaaaagatgtt
acatttttataaaagttgttaagtaatagtctactactttccaataaggc
aaatcttattctggactgcttagcacaaatttctgtagttgaggttgcaa
gtactccaatatccactttgtttaagcaaaatgattttattctattaaat
tttcttattaattttttagtttgagaattgaaatatgcatatgtgctttc
accaaatccaccttcctttcttcccctccatttcccctctttttcctccc
aactccatgtgctcttttataaatttatttttttgttatttaggatttca
tacatgattacactgtattttcatactttcaccctcttctgcttccaact
cctcctttatctcagtcacaccctgttaattcgtgactctagtcatggtg
tgtagtctatgtatgcatgtacaaactaagaactgagtgtgccttatttg
caggtatt
gaattctgatcttaaggcacactacgttccctgagaaatcctctttctgt
actggctgctgctcatgcgtctctggcttctttctccctgtgtgattagc
gctggtaaaagggacggaggaagcagactatgactcatcatggagatctt
tgtgggtcacaaatggttgggtttatctgaatgggaaaaatgaataaagc
gcactttaatagacttgagattttagtaatatgtgctgcttcttgaaagt
agcctatttgaagtggggccctctctcagaaggaagactggtcaagcagc
ttcctacgcagtgacttgggcctaagagatgccctccaaataatggctgc
tttactggtaagtggaacgggaggaacaatctcgggaagtcttagaattt
agcggttttataagtgaagcttttgtcttggggaaatatttaataatatt
aagagtcactgtcataagtccattccacatacattaatgttggaatgcct
ttgtctttcttctatataaagtatgttaagcagtccaggatgtagcttac
tggtaaaggggcttgtctgggcctctgttcctttcctagcactgtatatc
tattaactgggtgacaagtgggggttattaatgtcttaacagtgttgagt
agcctcagttgctcccaacagtaacccttggaactaaagtatcaactctc
gtgaactgcagttatggactgttgtgagctgtatgtgggtgctgggaatt
gaactggggtcctctgcaagagcagccagtgctcttaaccactgagccat
ctctccagcctcgtaatactttctttattacctttggaaatcctctgtga
agctggttggctatcagttaaacaaatcatttgctttatttgataacaga
tgcttccatttggacatttttcctcaacagtcatttagcacaagggtact
ttgtgtctagtggtcagtagtaagtatctagctagaagccagaacctgat
aaggagtgaaactctggggggtctctgaataaagaatatgaattacgcag
tcaagtacttgaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_98105936_98107103
seq2: B6Ng01-063A14.b_48_1205 (reverse)

seq1  AATACCTGCAAATAAGGGCAACATCAGTCTCTAGGTTTTGTACATGCATA  50
      ||||||||||||||| ||||   |||||   |||  ||||||||||||||
seq2  AATACCTGCAAATAA-GGCACACTCAGTTCTTAG--TTTGTACATGCATA  47

seq1  CATAGACTACACA-CATGACTAAGAGGTCACGAATTTAACAGGGTGTGAC  99
      ||||||||||||| ||||||| ||| |||||||| |||||||||||||||
seq2  CATAGACTACACACCATGACT-AGA-GTCACGAA-TTAACAGGGTGTGAC  94

seq1  TGGAGATAAAGGAGGAGTTGGAAGCAGGAAGAGGGTGAAAAGTATGAAAA  149
      | |||||||||||||||||||||||| |||||||||| ||||||||||||
seq2  T-GAGATAAAGGAGGAGTTGGAAGCA-GAAGAGGGTG-AAAGTATGAAAA  141

seq1  TACAGTGTAATCATGTATGAAATCCTAAATAACAAAAAAATAAATTTATA  199
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  TACAGTGTAATCATGTATGAAATCCTAAATAACAAAAAAATAAATTTAT-  190

seq1  AAAAGAGCACATGGAGTTGGGAGGAAAAAGAGGGGGAAATGGAGGGGAAG  249
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  AAAAGAGCACATGGAGTTGGGAGGAAAAAGA-GGGGAAATGGAGGGGAAG  239

seq1  AAAGGAAGGTGGATTTGGTGAAAGCACATATGCATATTTCAATTCTCAAA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGAAGGTGGATTTGGTGAAAGCACATATGCATATTTCAATTCTCAAA  289

seq1  CTAAAAAATTAATAAGAAAATTTAATAGAATAAAATCATTTTGCTTAAAC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAAAAATTAATAAGAAAATTTAATAGAATAAAATCATTTTGCTTAAAC  339

seq1  AAAGTGGATATTGGAGTACTTGCAACCTCAACTACAGAAATTTGTGCTAA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTGGATATTGGAGTACTTGCAACCTCAACTACAGAAATTTGTGCTAA  389

seq1  GCAGTCCAGAATAAGATTTGCCTTATTGGAAAGTAGTAGACTATTACTTA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTCCAGAATAAGATTTGCCTTATTGGAAAGTAGTAGACTATTACTTA  439

seq1  ACAACTTTTATAAAAATGTAACATCTTTTCAGTAATAGATTATCTCTTCC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACTTTTATAAAAATGTAACATCTTTTCAGTAATAGATTATCTCTTCC  489

seq1  TCTTCCTCCTCCCTGTTCATTAAGGCTCCCCTTATGTTCTTCATCCTGGC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCCTCCTCCCTGTTCATTAAGGCTCCCCTTATGTTCTTCATCCTGGC  539

seq1  GCGAACTCACTACGTAGCTCAGACTAGTTTCAACTTTGTGATTGATCTCT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGAACTCACTACGTAGCTCAGACTAGTTTCAACTTTGTGATTGATCTCT  589

seq1  TTGCAGGGATGAACATTAAAGGAAATTACAAATTCATGTAGTGACTACTT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCAGGGATGAACATTAAAGGAAATTACAAATTCATGTAGTGACTACTT  639

seq1  GTCAACTTCTTTTAGTGTGAATTTCAACTGAGGTATAGTTGACTGTTTCA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAACTTCTTTTAGTGTGAATTTCAACTGAGGTATAGTTGACTGTTTCA  689

seq1  CTATTTAATTTGGTGGCCAAATAGAACAACCCAAGTGTGGTGTCTTTAGC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTTAATTTGGTGGCCAAATAGAACAACCCAAGTGTGGTGTCTTTAGC  739

seq1  AATGATCTAGTTCTGGCAGGCAAAAAATGATGTTGGCACTAACCTGTATT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGATCTAGTTCTGGCAGGCAAAAAATGATGTTGGCACTAACCTGTATT  789

seq1  GTTCTGGGGGATTCTATAGTCTTCTTTACCAACAGCTCATAGGGAGGTAT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTGGGGGATTCTATAGTCTTCTTTACCAACAGCTCATAGGGAGGTAT  839

seq1  CCCAAACCTGGTACTGAGACTTTCATTTAATTTGGCTTCTGGGAGGAGCA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAAACCTGGTACTGAGACTTTCATTTAATTTGGCTTCTGGGAGGAGCA  889

seq1  TTAGCCACCCATGCAAGATGCCTGTACTCATTTCCATTAACTTATAAAAT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCCACCCATGCAAGATGCCTGTACTCATTTCCATTAACTTATAAAAT  939

seq1  GGTAGGGTTTCACAGGACTTTCTCACCCATCTTTAGTTTTGGTTAATTCT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAGGGTTTCACAGGACTTTCTCACCCATCTTTAGTTTTGGTTAATTCT  989

seq1  TTCCCCGATGTCCTGATCCTCACCCCATTTCCCTCCTCTGCCTTCATATC  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCCGATGTCCTGATCCTCACCCCATTTCCCTCCTCTGCCTTCATATC  1039

seq1  ACATGTATCCTGCTAATCTCCTTCCTTGAGGTTTCTCTTTCCTGTTCACA  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGTATCCTGCTAATCTCCTTCCTTGAGGTTTCTCTTTCCTGTTCACA  1089

seq1  TCTAATAGCCTCTTTCTAGCATTTTACCTCCACAGACACTCCAGTTTAAA  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAATAGCCTCTTTCTAGCATTTTACCTCCACAGACACTCCAGTTTAAA  1139

seq1  CATACCAGTGGAAGAATTC  1168
      |||||||||||||||||||
seq2  CATACCAGTGGAAGAATTC  1158

seq1: chrX_97989026_97990090
seq2: B6Ng01-063A14.g_68_1130

seq1  GAATTCTGATCTTAAGGCACACTACGTTCCCTGAGAAATCCTCTTTCTGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGATCTTAAGGCACACTACGTTCCCTGAGAAATCCTCTTTCTGT  50

seq1  ACTGGCTGCTGCTCATGCGTCTCTGGCTTCTTTCTCCCTGTGTGATTAGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGCTGCTGCTCATGCGTCTCTGGCTTCTTTCTCCCTGTGTGATTAGC  100

seq1  GCTGGTAAAAGGGACGGAGGAAGCAGACTATGACTCATCATGGAGATCTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGTAAAAGGGACGGAGGAAGCAGACTATGACTCATCATGGAGATCTT  150

seq1  TGTGGGTCACAAATGGTTGGGTTTATCTGAATGGGAAAAATGAATAAAGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGGTCACAAATGGTTGGGTTTATCTGAATGGGAAAAATGAATAAAGC  200

seq1  GCACTTTAATAGACTTGAGATTTTAGTAATATGTGCTGCTTCTTGAAAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTTTAATAGACTTGAGATTTTAGTAATATGTGCTGCTTCTTGAAAGT  250

seq1  AGCCTATTTGAAGTGGGGCCCTCTCTCAGAAGGAAGACTGGTCAAGCAGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTATTTGAAGTGGGGCCCTCTCTCAGAAGGAAGACTGGTCAAGCAGC  300

seq1  TTCCTACGCAGTGACTTGGGCCTAAGAGATGCCCTCCAAATAATGGCTGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTACGCAGTGACTTGGGCCTAAGAGATGCCCTCCAAATAATGGCTGC  350

seq1  TTTACTGGTAAGTGGAACGGGAGGAACAATCTCGGGAAGTCTTAGAATTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACTGGTAAGTGGAACGGGAGGAACAATCTCGGGAAGTCTTAGAATTT  400

seq1  AGCGGTTTTATAAGTGAAGCTTTTGTCTTGGGGAAATATTTAATAATATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCGGTTTTATAAGTGAAGCTTTTGTCTTGGGGAAATATTTAATAATATT  450

seq1  AAGAGTCACTGTCATAAGTCCATTCCACATACATTAATGTTGGAATGCCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGTCACTGTCATAAGTCCATTCCACATACATTAATGTTGGAATGCCT  500

seq1  TTGTCTTTCTTCTATATAAAGTATGTTAAGCAGTCCAGGATGTAGCTTAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCTTTCTTCTATATAAAGTATGTTAAGCAGTCCAGGATGTAGCTTAC  550

seq1  TGGTAAAGGGGCTTGTCTGGGCCTCTGTTCCTTTCCTAGCACTGTATATC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTAAAGGGGCTTGTCTGGGCCTCTGTTCCTTTCCTAGCACTGTATATC  600

seq1  TATTAACTGGGTGACAAGTGGGGGTTATTAATGTCTTAACAGTGTTGAGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAACTGGGTGACAAGTGGGGGTTATTAATGTCTTAACAGTGTTGAGT  650

seq1  AGCCTCAGTTGCTCCCAACAGTAACCCTTGGAACTAAAGTATCAACTCTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTCAGTTGCTCCCAACAGTAACCCTTGGAACTAAAGTATCAACTCTC  700

seq1  GTGAACTGCAGTTATGGACTGTTGTGAGCTGTATGTGGGTGCTGGGAATT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAACTGCAGTTATGGACTGTTGTGAGCTGTATGTGGGTGCTGGGAATT  750

seq1  GAACTGGGGTCCTCTGCAAGAGCAGCCAGTGCTCTTAACCACTGAGCCAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTGGGGTCCTCTGCAAGAGCAGCCAGTGCTCTTAACCACTGAGCCAT  800

seq1  CTCTCCAGCCTCGTAATAC-TTCTTTATTACCTTTGGAAATCCTCTGTGA  849
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  CTCTCCAGCCTCGTAATACTTTCTTTATTACCTTTGGAAATCCTCTGTGA  850

seq1  AGCTGG-TGGCTATCAGTTAAACAAATCATTTGCTTTATTTGATAACAGA  898
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGGTTGGCTATCAGTTAAACAAATCATTTGCTTTATTTGATAACAGA  900

seq1  TGCTTCCATTTGGACAGTTTTCCTCAACAGTCATTTAGCAC-AGGGTACT  947
      |||||||||||||||| |||||||||||||||||||||||| ||||||||
seq2  TGCTTCCATTTGGACATTTTTCCTCAACAGTCATTTAGCACAAGGGTACT  950

seq1  TTGTGTCTAGTGGTCAGTAGGTAAGTATCTAGCTAGAAGCCAGAAACTGA  997
      ||||||||||||||||||| ||||||||||||||||||||||||| ||||
seq2  TTGTGTCTAGTGGTCAGTA-GTAAGTATCTAGCTAGAAGCCAGAACCTGA  999

seq1  TAAGGAGTGAAACTCTGGGGGGTTCATCTGAATAAGAAAAGTGAATAACG  1047
      |||||||||||||||||||||||   |||||||||  ||  ||||| |||
seq2  TAAGGAGTGAAACTCTGGGGGGT--CTCTGAATAAAGAATATGAATTACG  1047

seq1  CAGTCCAAGGAACTTGAA  1065
      |||||  | | |||||||
seq2  CAGTC--AAGTACTTGAA  1063