BAC Information

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BAC

Clone NameB6Ng01-066E23
ChromosomeX (Build37)
Map Location 29,692,136 - 29,693,288
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100042071, LOC664958, LOC664964, LOC100042087, LOC100039171, LOC100042103, LOC100042109, LOC100042115, LOC100042122, LOC100042135, LOC100042144, LOC664982
Downstream geneLOC100039212, EG664989, LOC664996, LOC100039467, LOC100039481, LOC100039224, LOC100039500, LOC100040448, LOC100040458, LOC100040467, EG546176, LOC100040482, LOC629997
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-066E23.bB6Ng01-066E23.g
ACCDH885521DH885522
length1,140942
definitionDH885521|Mus musculus domesticus DNA, BAC clone: B6Ng01-066E23, 5' end.DH885522|Mus musculus domesticus DNA, BAC clone: B6Ng01-066E23, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccaaatttttgcacacttatatagcaagcttggcagctgtacagc
aggtactttattgtaaatgacctagtcataagccaggtatcttggccctg
agaacaaaaaattattaatctgagcaagctctcagataggaaaatggaaa
ctctactaccatattgatggactttgctatgatttttactactctgtcca
ctgcatgtatgtatgaacgataaagtctgcatcttaacactagaagagag
gatattaaaaacaaagagaatttattgaactttctagaggttattcgact
tatcctatgaactgtggtcctccactgccaggttgctgacctgactcccc
aacaaacaccccaaacacctatttatattctgatgacataacccaacctg
gtgccacctgagactccattgtaaagaagaaatatacagctcacatccac
aggttgatggaggacatcagaggcaaagatcattctcacacaaactactg
gaaagattgttggtaattgaccttcaccaggcatctggggtccatgcaac
tttctgagttactcagattaaagtacatttcacttaaactggacatcctg
gttcaagattatgccaggtttgtgttcaaataaatctaaaacagggagcc
cttacctaggaagggttccaaatatgaaataaacacctcagcaactttag
ggaaactgacttcagcaagctccatcctgccagggggtggaaaactttac
ttgctaggtttgcaggtaccttttgttgaggccggccagcagctcacatg
tatgggttcagcaatgcctctacaagaattatgccaattgtcacaccaca
atttgtgactcttagctatattgggagctagaggtcaccctcctcatctt
tattgtctctatggcctgatgaatcagaccaaaagccacaatatatactg
gaatgctttagaatgaaaattagtagctgccatctgcaccctcttggggg
caggatgcacacctggtacagtcagctgaaaggtgttgattgactgcttg
aaaacaaaatcaagacagtgaaagcaacgttaccagttttttttgtggag
ccaagtacttatcaggtgcattagcaacaatcaagctcag
gaattcccaagatacaactcatggagcaaatgaacctcaagcagaaggaa
gaccagtgtgaatgctttagccctacttagaaagggaaacaaaatactca
tgggaaataaagggtgaaagggactggaatgtaagagaaaaggggtaggt
gaaaaagagggaagaatcatatatcagaggagatggaggagatgtaatgt
gggtcaggagcctgaatagcactatctgaagccctgtctatctactggag
gtggatgctatttaagttcactttccccactgttgagcatatcactaatt
cctgagagtcttaactccaaggtccatggtactttctagagttccatggt
acctcaaccccaccctgtaacctgcatatttccactcattgttctaccac
tctgggcttctttcctgtcccacctaactgatcctcttcccatttctgtt
ccatctccccactcacacctaggttcctccttccccctgactcctatgat
tattttcttcaccctcaaatgttactgaagtatcctcacttgtgcctttc
tgttgttaaatttcttaagttcagtaggttgtatcctaggtattctgtac
tttttggctgatatccacttactcgtgagcacatactatgaatgtccttt
tgggtctgagatacttaactcatgatgataatttccagttctaaccattt
gcctgaaaaaactcatgattatctcattcttaatagctgaataatatttc
cattatgtaaagaaacccacattttctgtctctactcttctattgaggga
catctgggttatttcaagcttctgtctattgcatgtaaggctacatagtg
aatcacatggttctgtgtaatgtggggcttattttggatttttgctctaa
ttattcaactgtgttctcaggtagaactattccaaatttctg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_29692136_29693288
seq2: B6Ng01-066E23.b_47_1186

seq1  GAATTCCAAATTTTTGCACACTTATATAGCAAGCTTGGCAGCTGTACAGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAAATTTTTGCACACTTATATAGCAAGCTTGGCAGCTGTACAGC  50

seq1  AGGTACTTTATTGTAAATGACCTAGTCATAAGCCAGGTATCTTGGCCCTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTACTTTATTGTAAATGACCTAGTCATAAGCCAGGTATCTTGGCCCTG  100

seq1  AGAACAAAAAATTATTAATCTGAGCAAGCTCTCAGATAGGAAAATGGAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACAAAAAATTATTAATCTGAGCAAGCTCTCAGATAGGAAAATGGAAA  150

seq1  CTCTACTACCATATTGATGGACTTTGCTATGATTTTTACTACTCTGTCCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTACTACCATATTGATGGACTTTGCTATGATTTTTACTACTCTGTCCA  200

seq1  CTGCATGTATGTATGAACGATAAAGTCTGCATCTTAACACTAGAAGAGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCATGTATGTATGAACGATAAAGTCTGCATCTTAACACTAGAAGAGAG  250

seq1  GATATTAAAAACAAAGAGAATTTATTGAACTTTCTAGAGGTTATTCGACT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATTAAAAACAAAGAGAATTTATTGAACTTTCTAGAGGTTATTCGACT  300

seq1  TATCCTATGAACTGTGGTCCTCCACTGCCAGGTTGCTGACCTGACTCCCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCCTATGAACTGTGGTCCTCCACTGCCAGGTTGCTGACCTGACTCCCC  350

seq1  AACAAACACCCCAAACACCTATTTATATTCTGATGACATAACCCAACCTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAACACCCCAAACACCTATTTATATTCTGATGACATAACCCAACCTG  400

seq1  GTGCCACCTGAGACTCCATTGTAAAGAAGAAATATACAGCTCACATCCAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCCACCTGAGACTCCATTGTAAAGAAGAAATATACAGCTCACATCCAC  450

seq1  AGGTTGATGGAGGACATCAGAGGCAAAGATCATTCTCACACAAACTACTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTGATGGAGGACATCAGAGGCAAAGATCATTCTCACACAAACTACTG  500

seq1  GAAAGATTGTTGGTAATTGACCTTCACCAGGCATCTGGGGTCCATGCAAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGATTGTTGGTAATTGACCTTCACCAGGCATCTGGGGTCCATGCAAC  550

seq1  TTTCTGAGTTACTCAGATTAAAGTACATTTCACTTAAACTGGACATCCTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTGAGTTACTCAGATTAAAGTACATTTCACTTAAACTGGACATCCTG  600

seq1  GTTCAAGATTATGCCAGGTTTGTGTTCAAATAAATCTAAAACAGGGAGCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCAAGATTATGCCAGGTTTGTGTTCAAATAAATCTAAAACAGGGAGCC  650

seq1  CTTACCTAGGAAGGGTTCCAAATATGAAATAAACACCTCAGCAACTTTAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACCTAGGAAGGGTTCCAAATATGAAATAAACACCTCAGCAACTTTAG  700

seq1  GGAAACTGACTTCAGCAAGCTCCATCCTGCCAGGGGGTGGAAAACTTTAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAACTGACTTCAGCAAGCTCCATCCTGCCAGGGGGTGGAAAACTTTAC  750

seq1  TTGCTAGGTTTGCAGGTACCTTTTGTTGAGGCCGGCCAGCAGCTCACATG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTAGGTTTGCAGGTACCTTTTGTTGAGGCCGGCCAGCAGCTCACATG  800

seq1  TATGGGTTCAGCAATGCCTCTACAAGAATTATGCCAATTGTCACACCACA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGGTTCAGCAATGCCTCTACAAGAATTATGCCAATTGTCACACCACA  850

seq1  ATTTGTGACTCTTAGGCTATATTGGGAGCTAGAGGTCACCCTCCTCATCT  900
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  ATTTGTGACTCTTA-GCTATATTGGGAGCTAGAGGTCACCCTCCTCATCT  899

seq1  TTATTGTCTCTATGGCCTGATGAATCAGACCAAAAGCCACAATATATACT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTGTCTCTATGGCCTGATGAATCAGACCAAAAGCCACAATATATACT  949

seq1  GGAATGCTTTTAGAATGAAAATTAGTAGCTGCCATCTGCACACTCTTGGG  1000
      ||||||| ||||||||||||||||||||||||||||||||| ||||||||
seq2  GGAATGC-TTTAGAATGAAAATTAGTAGCTGCCATCTGCACCCTCTTGGG  998

seq1  GGCAGGGATGCACACCTGGTACAGTCAGGCTGAAGGGTGTTGATTGACCT  1050
      |||| |||||||||||||||||||||| |||||| |||||||||||| ||
seq2  GGCA-GGATGCACACCTGGTACAGTCA-GCTGAAAGGTGTTGATTGA-CT  1045

seq1  GCTTGAAAAACAAAATCCAGACAGTGAAAGGCAACAGTACACAG-TTTCT  1099
      ||||| ||||||||||| ||||||||||| |||||  ||| ||| ||| |
seq2  GCTTG-AAAACAAAATCAAGACAGTGAAA-GCAACGTTAC-CAGTTTTTT  1092

seq1  TTGTGGAAGCCCAGGTACTTTATTCAGTTGCAAATTAGCAACAATCAAGC  1149
      |||||||   ||| ||||||   |||| |||  |||||||||||||||||
seq2  TTGTGGA--GCCAAGTACTT--ATCAGGTGC--ATTAGCAACAATCAAGC  1136

seq1  TCAG  1153
      ||||
seq2  TCAG  1140