BAC Information

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BAC

Clone NameB6Ng01-068J03
ChromosomeX (Build37)
Map Location 105,188,596 - 105,189,408
singlet/doubletsinglet
Overlap genenone
Upstream geneP2ry10, A630033H20Rik, Gpr174, LOC668502, LOC622613, LOC385404, Itm2a, 4933401B06Rik, Tbx22, 2610002M06Rik, Gm732
Downstream geneGm378, LOC668516, Gm379, Brwd3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-068J03.bB6Ng01-068J03.g
ACCDH887119DH887120
length9271,218
definitionDH887119|Mus musculus domesticus DNA, BAC clone: B6Ng01-068J03, 5' end.DH887120|Mus musculus domesticus DNA, BAC clone: B6Ng01-068J03, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcaaatgaggaataccaaacggctgagaagcacctgaaaaaact
ttcaagatccttaatcatcagagaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctcagatcaaaacttcaggtgatagc
agatgctggcaaagaagtggagaaagaggaaaactcctccattgctggtg
ggattgcatgcttgtacaaccactctggaaatcagtctgttggttcctca
gaaaattggacatagtactactggaggatcctgcaatacctctcctgggc
atatatccagaagatatccacttgtaataaggacacatgctccaccatgt
tcatagcagccttacttagaatagccagtgttgtgagctgtccagtggct
cacaaggacgggtacacctgaacagcaggccggtgctgaaaaagaaggaa
actaggtgatgagaggaagatggaatcaaggcagggttctgatcaaggtt
caaattttaatgttggggaatactccttttaaaagagggggggcgggaat
tccattcctaccagttcatccttggagcctggaaccagctgcaggtgatg
atgtacagaataggacaccttagcccagtggttgccctttctgcaccagg
gacaaattctcgacacctttgttcttaggacaattacttttgatgatcca
aactttcacacttaaatcatgcattattccctcatttccactagaacatt
gcttgtaaggcagtcccttgcgaagcagcacaagatggcccgatgtctgt
gcaaagatggacatatctcaccaaatctgtttatcctttgtgtggctgga
tagcagtgcaacacattgcgttagcattctcataagccaatgcaaatgaa
aggacttcccgagcagattttcaaggg
gaattcagctcacactttctagttctttctgaattctgactgactggttt
ccctcaggtcgtcttgtgaaactcctctccaagctgattgatccaatctg
gtttctctcatctcactgaattgctctgtttggtctcaaactaactctgg
cactttgttctaagcttcttgctgcttcttattcactggcttcaactgca
tctgctgacctacactgatctgtatgaactcatgcacaaatgaactcaac
tctactgcactgatgcccaactgactgaaatgaattcaactgattgaaca
ggaattactcctgaatgctaggattaaaggcatgtaccaccatgcctcta
gacatagcttttctttacctgaaacatgctctatatcaggctggccttga
attcagagatctgcttgcctctgtctactaggattaaaagtatgtctgta
ttgcagccagggcaactatgttgctggattaaaattcctatacaaaatac
atctagcattcatctgcttagatattgtatggatgacatgttcaattgtg
agaataaggaatttatgtctcccactatcaatgtgtgaaagtcaatatgt
gatttaaactatagtagtgattcttttaaaaaaaaactggttgtccttat
gtctgtgacatagatattaaagacctcaagctgtattacagagcaattgt
gattaaaaactgcatggtactggtacagcgacagacaggcagatcaatgg
aatacaattgaagacccagagatgaacccacatacctatggtcacctgat
ctttgacaagggagctaaaaccatccagtagaaaagacagcattttcaac
aaatggtgctggcacaactggcgtttatcatgtagaagaatacaaattga
ttcattcttatttcttgtacaaagctcaagtctagtggatcaaagaactc
acaaaaaacagagaactgaaatttataaagaagaagtgggaaaactgaag
atatgggcacaagggtaaatctgaacgaaagcatgtctttaacttgaatc
agaatcaacaaatggactcataaatgcaagcttctgtaagaacaagaatg
ggtcatagacaaagctcccgcgatgggagatttccaattacctgaaagca
tttgcattataggtagctgtccgattcaatgcttatgtgcgctaacgatt
ctcttggaatacattgca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_105188596_105189408
seq2: B6Ng01-068J03.b_162_970

seq1  GAATGGCTCAGATCAAAACTTCAGGTGATAGCAGATGCTGGCAAAGAAGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGGCTCAGATCAAAACTTCAGGTGATAGCAGATGCTGGCAAAGAAGT  50

seq1  GGAGAAAGAGGAAAACTCCTCCATTGCTGGTGGGATTGCATGCTTGTACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAAAGAGGAAAACTCCTCCATTGCTGGTGGGATTGCATGCTTGTACA  100

seq1  ACCACTCTGGAAATCAGTCTGTTGGTTCCTCAGAAAATTGGACATAGTAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACTCTGGAAATCAGTCTGTTGGTTCCTCAGAAAATTGGACATAGTAC  150

seq1  TACTGGAGGATCCTGCAATACCTCTCCTGGGCATATATCCAGAAGATATC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGGAGGATCCTGCAATACCTCTCCTGGGCATATATCCAGAAGATATC  200

seq1  CACTTGTAATAAGGACACATGCTCCACCATGTTCATAGCAGCCTTACTTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTGTAATAAGGACACATGCTCCACCATGTTCATAGCAGCCTTACTTA  250

seq1  GAATAGCCAGTGTTGTGAGCTGTCCAGTGGCTCACAAGGACGGGTACACC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATAGCCAGTGTTGTGAGCTGTCCAGTGGCTCACAAGGACGGGTACACC  300

seq1  TGAACAGCAGGCCGGTGCTGAAAAAGAAGGAAACTAGGTGATGAGAGGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACAGCAGGCCGGTGCTGAAAAAGAAGGAAACTAGGTGATGAGAGGAA  350

seq1  GATGGAATCAAGGCAGGGTTCTGATCAAGGTTCAAATTTTAATGTTGGGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGAATCAAGGCAGGGTTCTGATCAAGGTTCAAATTTTAATGTTGGGG  400

seq1  AATACTCCTTTTAAAAGAGGGGGGGCGGGAATTCCATTCCTACCAGTTCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACTCCTTTTAAAAGAGGGGGGGCGGGAATTCCATTCCTACCAGTTCA  450

seq1  TCCTTGGAGCCTGGAACCAGCTGCAGGTGATGATGTACAGAATAGGACAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTGGAGCCTGGAACCAGCTGCAGGTGATGATGTACAGAATAGGACAC  500

seq1  CTTAGCCCAGTGGTTGCCCTTTCTGCACCAGGGACAAATTCTCGACACCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGCCCAGTGGTTGCCCTTTCTGCACCAGGGACAAATTCTCGACACCT  550

seq1  TTGTTCTTAGGACAATTACTTTTGATGATCCAAACTTTCACACTTAAATC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTCTTAGGACAATTACTTTTGATGATCCAAACTTTCACACTTAAATC  600

seq1  ATGCATTATTCCCTCATTTCCACTAGAACATTGCTTGTAAGGCAGTCCCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCATTATTCCCTCATTTCCACTAGAACATTGCTTGTAAGGCAGTCCCT  650

seq1  TGCGAAGCAGCACAAGATGGCCCGATGTCTGTGCAAAGATGGACATATCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  TGCGAAGCAGCACAAGATGGCCCGATGTCTGTGCAAAGATGGACATATCT  700

seq1  CACCAAATCTGTTTATCCTTTGTGTGGCTGGATAGCAGTGCAACACATTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCAAATCTGTTTATCCTTTGTGTGGCTGGATAGCAGTGCAACACATTG  750

seq1  CGTTAGCATTCTCATAAGCCAATTGCAAAATGAAAGGACTTCCCGAGTCA  800
      |||||||||||||||||||||| ||| |||||||||||||||||||| ||
seq2  CGTTAGCATTCTCATAAGCCAA-TGC-AAATGAAAGGACTTCCCGAG-CA  797

seq1  GATTTTCCAAGGG  813
      |||||| ||||||
seq2  GATTTT-CAAGGG  809