BAC Information

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BAC

Clone NameB6Ng01-073M04
ChromosomeX (Build37)
Map Location 38,622,765 - 38,623,186
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100039769
Downstream geneLOC385344, Gria3, LOC100039802, LOC676077, Thoc2, LOC665488, EG333830, LOC100039838, Birc4, Stag2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-073M04.bB6Ng01-073M04.g
ACCDH890792DH890793
length1,0471,099
definitionDH890792|Mus musculus domesticus DNA, BAC clone: B6Ng01-073M04, 5' end.DH890793|Mus musculus domesticus DNA, BAC clone: B6Ng01-073M04, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaattgcactgagcatctgaaaagaggcaaaaagcaatctgtgca
gctcgggatgacctttattgcagctttttctaaaccccctcattcttgca
cgctcgaagtaatttagaaggcaaaaactggcacaattatactctacttc
tttgttttcctaaactaaatgatattgatttctatgcatccatttaattg
attgtataattatatgcaaacaaaagtaattatcaaacgtccattctgtc
acagtgactaatcagtttctctgactcctgtaatttacagatcctggaaa
tgctgtgtcagggataatggttattaacacattcagcaaacgttgaatgg
tttacattaatggtcagataacctttataaatgagaagacttctactaca
ttgtttaataaaaccaataatcaataaggaaagcagtacaaaatagcaaa
cagcttttaaaaacttttctcacctgtttggataagatacaatttgcaaa
acatatgaaactcaggaagaacaaagaccaaagtgtggacactttgtgcc
tccttagaattgggaacaaaacacccatagaaggagtgacagagacaaag
tttggagctgagacgaaaggatggaccatctagagattgccatactcgtg
gatccatcccatcatcagcctccaaatgctgacaccattgcatacactag
caagattttgctgaaaggaccttgatatagctgtctcttgtgaggctatg
ccgggacctagcaagcacagaagtgtgctcacaatcagctattggatgga
tcacagggcgcccaatggaggagctagagaaagtacccaaggagctaaag
gggtctgcaaccctacaggtggaacaacaatatgaactaaccagtacccc
ggagctcgtgtctctagctgcatatgtatcagaagatggcttattagcca
tcagtggaaagagaggcccattggtcttgcaaactttatatgcctcagta
caggggaacgccagggccaagaagtggggagtgggttgggtaaggga
gaattctgtttagctctgtataccatttttcaattggtttatttaggttg
ttggtgtttaacttcttgaattcttaataaatttggggtactagtcttct
atcagatatagagctgatgaagatccttttctaatctctaggctgctgtt
ttgcccattgacagtgttctctgcctaacagaggcttttcaatttcctga
ggtccaatttatcaattattgatcttagggtctgagccattgatattctg
ttcaggaagttttctcctgtacaaatgctttgaagggaaattccatttcc
cacttccttttctgtgagatttagtatatcctgttttgtgtggaggtcct
taatccacttggacttgagttttgtgcatgatgatgaatatggacatttt
tttcattcttctacatagagacatcctattagagcagcaccatttgttga
agattctttcctatttccactgtatggttttggcttctatatcaaaaatc
aatagaccataggtgtgtagggttttttttctgggtcttcaatttaattg
ccttgatcaatatgcctgtttctgtataaataccatggagtttttttttt
tttttaatcactctacagtacagcttgaagttctgaagttcatttcctta
tgcaggattgttttgtctctcctgggttttttgtttttccatatgaggtt
gagaattgctctctgaaggtgtatcaaaaattgtttggggattttgattg
tgattgttttgaatatgtagattgcttttggtaaaatggcagttttcaca
atgtttatcttacctatccatgggcatggatgatctttccatcttctgac
atattctttgatagttttcttcaggaacttgaagttattgtatacagatc
ttttacttgctttgtgagatttacaccaagaaattttatattgttcatga
gtaaaggtgctgtttttgtatttttttctaggctgattatcattcataaa
ggaggctacagatgttcttgagttattttgtatcagacactttgctattc
tttgccagctgtaagggtctctgtagaatgtttgggtggtcatagtatc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_38622765_38623186
seq2: B6Ng01-073M04.b_674_1092 (reverse)

seq1  TCCCTCACCC-ACCCACT-CCCAATTCTTGGCCCTGGCGATCTCCTGTAC  48
      ||||| |||| ||||||| |||| ||||||||||||||| || |||||||
seq2  TCCCTTACCCAACCCACTCCCCACTTCTTGGCCCTGGCGTTCCCCTGTAC  50

seq1  TGAGGCATATAAAGTTTGCACGAACAATGGGGCTCTCTTTCCACTGATGG  98
      |||||||||||||||||||| || ||||||| ||||||||||||||||||
seq2  TGAGGCATATAAAGTTTGCAAGACCAATGGGCCTCTCTTTCCACTGATGG  100

seq1  CCGACTAGGCCAACTTCTGCTACATATGCAGCTAGAGACACGAGCTCTGA  148
       | | || |||| |||||| |||||||||||||||||||||||||||   
seq2  -CTAATAAGCCATCTTCTGATACATATGCAGCTAGAGACACGAGCTC--C  147

seq1  GGGGTACTGGTTAGTTCATATTGTCGTTCCACCTATAGGGTTGCAGAGCC  198
      |||||||||||||||||||||||| ||||||||| |||||||||||| ||
seq2  GGGGTACTGGTTAGTTCATATTGTTGTTCCACCTGTAGGGTTGCAGACCC  197

seq1  CTTTAGCTCCTTGGTTACTTTCTCTAGCTCCTCCATTGGGGGCCCTGTGA  248
      |||||||||||||| ||||||||||||||||||||||||| |||||||||
seq2  CTTTAGCTCCTTGGGTACTTTCTCTAGCTCCTCCATTGGGCGCCCTGTGA  247

seq1  TCCATCTAATAGCTGATTGTGAGCATCCACTTCTGTGTTTGCTAGGCCCT  298
      |||||| ||||||||||||||||||  |||||||||| |||||||| || 
seq2  TCCATCCAATAGCTGATTGTGAGCA--CACTTCTGTGCTTGCTAGGTCCC  295

seq1  GGCATAGTCTCACAAGAGACAGCTATATCAGGGTCCTTTCAGCATAATCT  348
      ||||||| |||||||||||||||||||||| ||||||||||||| |||||
seq2  GGCATAGCCTCACAAGAGACAGCTATATCAAGGTCCTTTCAGCAAAATCT  345

seq1  TGCTAGTGTATGCAATGATGTCAGCGTTTGGAAGCTGATCATGGGGTGGA  398
      ||||||||||||||||| ||||||| |||||| |||||| ||||| ||||
seq2  TGCTAGTGTATGCAATGGTGTCAGCATTTGGAGGCTGATGATGGGATGGA  395

seq1  TCCCTGGATATGGCAGTTTCTAGA  422
      |||  |  ||||||| | ||||||
seq2  TCCACGAGTATGGCAATCTCTAGA  419