BAC Information

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BAC

Clone NameB6Ng01-074K24
ChromosomeX (Build37)
Map Location 109,638,929 - 109,639,832
singlet/doubletsinglet
Overlap gene2010106E10Rik
Upstream geneRps6ka6, EG664791, D030011N01Rik, LOC100038989, Tex16, LOC622570, 4933403O08Rik, EG385407, Apool, Satl1, EG623341
Downstream geneZfp711, Pof1b, LOC623412, EG623428, LOC100039112, Chm, EG664918, Dach2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-074K24.bB6Ng01-074K24.g
ACCDH891461DH891462
length9041,069
definitionDH891461|Mus musculus domesticus DNA, BAC clone: B6Ng01-074K24, 5' end.DH891462|Mus musculus domesticus DNA, BAC clone: B6Ng01-074K24, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcataaggatgcataaggaataagagcaagatattgtcttctggcc
tccacagccccccccaaacacactcacacaaatgtacacacacacaaatg
cacacacttgtatacatacctgcaccggtatatatatgaatatgtacata
catgcacaaatttttgtttgtttgtttgtttgtttgtttgttttttgaga
cagggtttctctgtatagctgtggctgtcctggaactcactttgtagacc
aggctggcctcgaactcagaaattggcctgcctctgcctcccgagtgctg
ggattaaaggtgtgcaccaccacacctgactcacacaaaaaaattagatt
ccttcttctgcaacctttaacacttttaaaatatttaaaccacatatttg
gtaaggtttgtttctttgtcttgttttgttgtttcttgtttttgtttttc
tgcttcaaaaatgcaaattgtttgtagtaagtagtcaaaagctttgtaaa
ggagccataaggctctcaaggtcactaccccacaccccacaccctgtact
ctctggttcagtataagcatgctagctttaagcgaaacaccatgtacata
ttgcagtgtcctacactaatcctcaaaataaatttctgaatcttctacaa
catgcctcctctttgcctgatttcctcccacttagcccaacagtttatta
accgtgggatcattatttagtaataaaatagtctgagaaattgagaaagt
tttatgagttttagaaaagtatgattatgagaatatttatttactggttg
aaaagagtttaatgtatgagaagcagtttttttatttaattacgtctgtg
tgtgaatgtgcatgcatgagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg
tgtg
gaattctattgagtatttttgtatcaatattcataagtgaaattgatctg
aagttctctttctttgttgggtctttgtgtggtttaggtatcagagtaat
tatggcttcatagaataagtcaggtaatgttccttctgtttctatttaat
ggaatagttagaggtggtttggctcttctttgaaggcctggtagaattct
gttttaaagtcatctgggcctggactttttttttttttaatgggactgtt
tatatagtttgttgcagcctgatttaactttggcacatagtatctgtcta
gataatcatccatttcatctagatttttcagtttggttgagtaaaggctt
ttgtagtaagatctgatgattttttaaatttcctcattttctgttgttat
gtctccctttccatttctgattttttaaatttagatcctctctctattcc
cattagttagtttgggtaagggttaatgtatcttgttgattttctcaatg
aagcagttcctgattttgttgattctttgcattgttatcttagtttctac
tcggttaatttcagccctgagttggactatttcctgttattgtctcctct
tgggagtgtgtgcttctttttgttctagagctctcacctgtgatgttaag
tcaatattataggatctcaccaatttttttaagaaggcactttggcacta
tgaattttcctcttaacactgctttcattgtgtcccataagtttgggtat
gttgtgccttcattttcactgaattctagaaagtctttagtttctttatt
attttcttccctgacccagttatcactgagtagagagttgttccacttcc
atgtgtatgtgggttttctattgtttttgttgttattgacatcctgcctt
agtacatgggtgatctgatagaatgcatggcattatttcaatctttttgc
atctattggaggcctgttatatgatcctattatatgtttaaatttggaga
aagttatatgaagtgcctgaagaaggaggttaatatttctttttgaaggg
gggggggggttgacagtct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_109638929_109639832
seq2: B6Ng01-074K24.b_45_948 (reverse)

seq1  CACACACACACACACACACACACACACACACACACTCATGCATGCACATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACACACACACACACACACACACTCATGCATGCACATT  50

seq1  CACACACAGACGTAATTAAATAAAAAAACTGCTTCTCATACATTAAACTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACAGACGTAATTAAATAAAAAAACTGCTTCTCATACATTAAACTC  100

seq1  TTTTCAACCAGTAAATAAATATTCTCATAATCATACTTTTCTAAAACTCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCAACCAGTAAATAAATATTCTCATAATCATACTTTTCTAAAACTCA  150

seq1  TAAAACTTTCTCAATTTCTCAGACTATTTTATTACTAAATAATGATCCCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAACTTTCTCAATTTCTCAGACTATTTTATTACTAAATAATGATCCCA  200

seq1  CGGTTAATAAACTGTTGGGCTAAGTGGGAGGAAATCAGGCAAAGAGGAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGTTAATAAACTGTTGGGCTAAGTGGGAGGAAATCAGGCAAAGAGGAGG  250

seq1  CATGTTGTAGAAGATTCAGAAATTTATTTTGAGGATTAGTGTAGGACACT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTTGTAGAAGATTCAGAAATTTATTTTGAGGATTAGTGTAGGACACT  300

seq1  GCAATATGTACATGGTGTTTCGCTTAAAGCTAGCATGCTTATACTGAACC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAATATGTACATGGTGTTTCGCTTAAAGCTAGCATGCTTATACTGAACC  350

seq1  AGAGAGTACAGGGTGTGGGGTGTGGGGTAGTGACCTTGAGAGCCTTATGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGTACAGGGTGTGGGGTGTGGGGTAGTGACCTTGAGAGCCTTATGG  400

seq1  CTCCTTTACAAAGCTTTTGACTACTTACTACAAACAATTTGCATTTTTGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTTTACAAAGCTTTTGACTACTTACTACAAACAATTTGCATTTTTGA  450

seq1  AGCAGAAAAACAAAAACAAGAAACAACAAAACAAGACAAAGAAACAAACC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGAAAAACAAAAACAAGAAACAACAAAACAAGACAAAGAAACAAACC  500

seq1  TTACCAAATATGTGGTTTAAATATTTTAAAAGTGTTAAAGGTTGCAGAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACCAAATATGTGGTTTAAATATTTTAAAAGTGTTAAAGGTTGCAGAAG  550

seq1  AAGGAATCTAATTTTTTTGTGTGAGTCAGGTGTGGTGGTGCACACCTTTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAATCTAATTTTTTTGTGTGAGTCAGGTGTGGTGGTGCACACCTTTA  600

seq1  ATCCCAGCACTCGGGAGGCAGAGGCAGGCCAATTTCTGAGTTCGAGGCCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCAGCACTCGGGAGGCAGAGGCAGGCCAATTTCTGAGTTCGAGGCCA  650

seq1  GCCTGGTCTACAAAGTGAGTTCCAGGACAGCCACAGCTATACAGAGAAAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGGTCTACAAAGTGAGTTCCAGGACAGCCACAGCTATACAGAGAAAC  700

seq1  CCTGTCTCAAAAAACAAACAAACAAACAAACAAACAAACAAAAATTTGTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTCTCAAAAAACAAACAAACAAACAAACAAACAAACAAAAATTTGTG  750

seq1  CATGTATGTACATATTCATATATATACCGGTGCAGGTATGTATACAAGTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTATGTACATATTCATATATATACCGGTGCAGGTATGTATACAAGTG  800

seq1  TGTGCATTTGTGTGTGTGTACATTTGTGTGAGTGTGTTTGGGGGGGGCTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCATTTGTGTGTGTGTACATTTGTGTGAGTGTGTTTGGGGGGGGCTG  850

seq1  TGGAGGCCAGAAGACAATATCTTGCTCTTATTCCTTATGCATCCTTATGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGGCCAGAAGACAATATCTTGCTCTTATTCCTTATGCATCCTTATGA  900

seq1  ATTC  904
      ||||
seq2  ATTC  904