BAC Information

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BAC

Clone NameB6Ng01-075E09
ChromosomeX (Build37)
Map Location 123,534,822 - 123,535,746
singlet/doubletsinglet
Overlap genenone
Upstream geneEG626048, LOC100040410, LOC100039903, LOC665679, 4932411N23Rik, Gm381
Downstream geneLOC100040472, Gm382, 4921511C20Rik, 4930412D23Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-075E09.bB6Ng01-075E09.g
ACCDH891875DH891876
length1,143996
definitionDH891875|Mus musculus domesticus DNA, BAC clone: B6Ng01-075E09, 5' end.DH891876|Mus musculus domesticus DNA, BAC clone: B6Ng01-075E09, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcttacacacagattagtaattaagaaaaaatatggcaggtggaga
ttgttggagactttttaagggttgatgaggctacggaacttatggaggca
ctacaatccggcaaacctaccccagctaccattccaggaaatgcatatag
tattatggatttggaggattcttttcatattattcctttgcatcctgaag
acaataaaaactttgcatttagtgtccctgtttgtgattaaaaacaacaa
caacaacaacaacatgaagctatatcattagaaagttttgcctcaaggaa
tggctaatagccctacattatgtaaaaaaaaaaaaaaaaaaaaaaaagaa
aaaaagaaattgtcactgcttcaatataagtaaggacttggaagctttca
gtgcatattattcattatatggatggtattttcttatctgacctatttga
aagcattttactacatccctttgtgcatacacaacaagttttaaaatttg
gggagcagtagttgttccagaaaagattcaaatgcaatatatttttcaat
atttggaacattaattatatcctaaacaaagtatagcatagaaaattcaa
gtaagaaaagataatttacttactttaaatgattttcagaagttgttagg
aaatattaattggctaagacctcatcttaagcttaccacaggagaactta
aacctctgtttgatagtctcaaggggtatgcaaacactatttcccctcaa
cagttaactgatgagggatgaatagctttgcagaaagtagaagccattaa
ccaaaaacagatacattatatattgactatgaccaatttttggctgtttg
cctgcattattgctactaatgtgcccacagcagtttttttttttgttttt
gtgtgcgtgtgtttgttgttgatggttttgacaaaggaccattaatgtgg
atcatcttctttacctccaaaatgtttacaccctattataagctattgct
gtgtatacagaattgtaggtagacatggaatatttttggagactgatgag
tattatctatttcaatagcattgatgattattgcaaatactgatatgacc
atttgcatgttacaacttttcagcaaatggataatacaatccc
gaattcatatctctctttacacaacactggcccacaactaaatacagtaa
atttttgtgacttttaatatacaataactctctcttaatttttttatata
aaaaaagtattaagcttaggaatagttgggttaataacaataacaataac
aatagtaatagatacagtactacttatatccattcttctacccaaacaat
gaaaaaaaaacttgaaaaaagtaacatcatatataccaaacttatattgt
ctgtattcatgtagtagtcacactgaggcctaacccttactataagttat
taattcagggcagttaatttattttcttattatctgaaatagccactcat
aatctcttgttcctatcttgagacttccaagtatttcctaaatacagttt
tgattcatttaattgctatttatttatttatttgtaattggatattttct
ttatttatatttcaaatgttatccttttcttgtttctctccctcctagaa
acatcctgtcacaacctcccttcctgcttcaatgagagtattcctccatc
agtacactcacctactccaacctccctgccctcaattcccctatactagg
gcatctattgagccttcataggactaaggacctctcctctcattgacgca
tgacaagacgagcctctgctacacatgccgctggagccatgtgtactcat
ttgctgatggcttattccctgagagttctggggggtctaattggttgata
ttgttgttcttcctatggggttataaaccccttccactccttcagtcctt
tctctaactcctctattggggaacccatgctcagtctaatggtcttagaa
agatcaggagttcaaggcccataactaaatgtaataaaagcaatatacag
caaaaagtagctgtagtggctattcctggtgtcacttgacatatttggaa
tgaactacatccggattggaagctcacagtgaccctatctgagctt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_123534822_123535746
seq2: B6Ng01-075E09.g_70_994

seq1  GAATTCATATCTCTCTTTACACAACACTGGCCCACAACTAAATACAGTAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATATCTCTCTTTACACAACACTGGCCCACAACTAAATACAGTAA  50

seq1  ATTTTTGTGACTTTTAATATACAATAACTCTCTCTTAATTTTTTTATATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTGTGACTTTTAATATACAATAACTCTCTCTTAATTTTTTTATATA  100

seq1  AAAAAAGTATTAAGCTTAGGAATAGTTGGGTTAATAACAATAACAATAAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAGTATTAAGCTTAGGAATAGTTGGGTTAATAACAATAACAATAAC  150

seq1  AATAGTAATAGATACAGTACTACTTATATCCATTCTTCTACCCAAACAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGTAATAGATACAGTACTACTTATATCCATTCTTCTACCCAAACAAT  200

seq1  GAAAAAAAAACTTGAAAAAAGTAACATCATATATACCAAACTTATATTGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAAAAAACTTGAAAAAAGTAACATCATATATACCAAACTTATATTGT  250

seq1  CTGTATTCATGTAGTAGTCACACTGAGGCCTAACCCTTACTATAAGTTAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTATTCATGTAGTAGTCACACTGAGGCCTAACCCTTACTATAAGTTAT  300

seq1  TAATTCAGGGCAGTTAATTTATTTTCTTATTATCTGAAATAGCCACTCAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTCAGGGCAGTTAATTTATTTTCTTATTATCTGAAATAGCCACTCAT  350

seq1  AATCTCTTGTTCCTATCTTGAGACTTCCAAGTATTTCCTAAATACAGTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTCTTGTTCCTATCTTGAGACTTCCAAGTATTTCCTAAATACAGTTT  400

seq1  TGATTCATTTAATTGCTATTTATTTATTTATTTGTAATTGGATATTTTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTCATTTAATTGCTATTTATTTATTTATTTGTAATTGGATATTTTCT  450

seq1  TTATTTATATTTCAAATGTTATCCTTTTCTTGTTTCTCTCCCTCCTAGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTATATTTCAAATGTTATCCTTTTCTTGTTTCTCTCCCTCCTAGAA  500

seq1  ACATCCTGTCACAACCTCCCTTCCTGCTTCAATGAGAGTATTCCTCCATC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCCTGTCACAACCTCCCTTCCTGCTTCAATGAGAGTATTCCTCCATC  550

seq1  AGTACACTCACCTACTCCAACCTCCCTGCCCTCAATTCCCCTATACTAGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTACACTCACCTACTCCAACCTCCCTGCCCTCAATTCCCCTATACTAGG  600

seq1  GCATCTATTGAGCCTTCATAGGACTAAGGACCTCTCCTCTCATTGACGCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCTATTGAGCCTTCATAGGACTAAGGACCTCTCCTCTCATTGACGCA  650

seq1  TGACAAGACGAGCCTCTGCTACACATGCCGCTGGAGCCATGTGTACTCAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACAAGACGAGCCTCTGCTACACATGCCGCTGGAGCCATGTGTACTCAT  700

seq1  TTGCTGATGGCTTATTCCCTGAGAGTTCTGGGGGGTCTAATTGGTTGATA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTGATGGCTTATTCCCTGAGAGTTCTGGGGGGTCTAATTGGTTGATA  750

seq1  TTGTTGTTCTTCCTATGGGGTTATAAACCCCTTCCACTCCTTCAGTCCTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTGTTCTTCCTATGGGGTTATAAACCCCTTCCACTCCTTCAGTCCTT  800

seq1  TCTCTAACTCCTCTATTGGGGAACCCATGCTCAGTCTAATGGTCTTAGAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTAACTCCTCTATTGGGGAACCCATGCTCAGTCTAATGGTCTTAGAA  850

seq1  AGATCAGGAGTTCAAGGCCCATAACTAAATGTAATAAAAGCAATATACAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCAGGAGTTCAAGGCCCATAACTAAATGTAATAAAAGCAATATACAG  900

seq1  CAAAAAGTAGCTGTAGTGGCTATTC  925
      |||||||||||||||||||||||||
seq2  CAAAAAGTAGCTGTAGTGGCTATTC  925