BAC Information

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BAC

Clone NameB6Ng01-077C20
ChromosomeX (Build37)
Map Location 77,242,182 - 77,243,034
singlet/doubletsinglet
Overlap genenone
Upstream geneEG629116, LOC636082, EG667736, LOC100041373, EG636104, 2410003J06Rik, LOC667749, LOC211702, LOC667755
Downstream geneLOC211705, LOC654474, LOC629153, LOC546338, LOC100042229, LOC667776, EG629182
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-077C20.bB6Ng01-077C20.g
ACCDH893222DH893223
length1,253856
definitionDH893222|Mus musculus domesticus DNA, BAC clone: B6Ng01-077C20, 5' end.DH893223|Mus musculus domesticus DNA, BAC clone: B6Ng01-077C20, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttctttatgtcctctaccatcatcatgagatatgcttttaaat
ccaggtctaccttttcaggtgtgttagggtgtcctggattgggcgaagtg
ggcgttctgggttctgatgatggtgagtggtcctggcttctgttagtagg
attcttacgtttacctttcgccatctggcaatctctggagttagttgtta
tagttgtctttgttaagagattgttcctctgttgattttgttaccctcta
tcagcaggcgtgggagacaagctctcttctctgagtttcagtggtcagag
cagtctctgtaggcaagctctcctctttcagggaaggtgtacagttatct
ggtgtttggacctcctcctggctgaaggtgaaggcccaaaacaggatctt
tcccagaagctgtgttgctttggccaggaaggtggccagttgtctggagt
cgaagatgtcgccgcctcagaagctctgtggctcttgtccggaaggaggc
cgaccgtctggagctgaagatggtgccgccccagaatctctgtgactctc
tcgcccgtcccagaaatggctggcactctgtattccacagggtcacccgt
gcagcctgcccttcgcggagtctcggagccaagaaggttcccgccggcgc
ctgtgccacaaacctctcaggccgggcagacccccgtgctctcaccagga
aggtggcccggctatctggagctgaagatggcgccgccccagaagctctg
cgactctcgcccgtcccagaaatggctggcactctgtattccacccggtc
acccgtgcagcctgccctccgcggagtcccggagccaagaaaggctcctg
ccggcgcctgtgccacaaaccttctcaggcggggcagacccccgtgcttc
tcaccaggaaaggtggccggctttctggaagcttgagatggcgcctgcct
ccagaagctctgcgactcttgcccgtcccagaaatggctggcactctgta
ttccacacggtcacccgtgcagctctgtccttccgtggagtctcggagcc
aagaaggttctgcccggcgcttgtgtcataaacctctcagcgggcagaac
tcccgtgctctcaccagaatgggtgctgtctatctgtggagctgaaatat
ggctcctgtctctgaagctctggtaactctgctctggtcgaatgtctgca
tctctgaatctcactcggataacatcctaggcacctgacgtgctctcctg
ctg
gaattcatagtggtgagaggctctatttgtgcagtgagtgtgggaaagcc
tttgtctatatgtccaaatttgatacaaacaagaaagttcaaaccaaagc
aacactggtccaagtagaaaattcttcagtagaaactcttagccacatcc
accacaggtataacactggagtaagattgcatgtgtttagcagatgtggg
acccagatcttaaaattagaacagcttggtgactgtgctatccattaagt
tcctttcaaagcagtccagagcttagaagaaatagaatgcactatattct
ttacaatatactatgtctttagtaattgtttggggagtttttgagtgttt
taagcctacaagggctccttgttccttcacttttgttggcttttacataa
gcacgcctatactcctgctgaaatcacctgagctgtgatctgttgcaagt
gtcagagacttcaattttcatggcctcttgactatatttgacagccatga
tgtatttctccagcctataaactggcacacctgtgaatttttttctatac
tggcctgatttgtgaaatggcttctttccttgcttgctgtttaatcttta
ttattattattattattattattattattattagttttttaatatctgga
gatagatgattggtaaaagaattcttattttctcagcagtaaggtatggg
atccttcgtgtgagaggtaactcagaactttgtatgttaaagagaatagc
aaaggatcagagagtagtttgaatattctttggtgtaattgtcaatttcc
ttgtaagcttttttagacaaattataggctttaatatgaacatctttgtt
tcacat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_77242182_77243034
seq2: B6Ng01-077C20.g_69_924 (reverse)

seq1  ATGTG-AACAAAGATGTTCATATTAAAGCCTATAATTTGTCTAATAAAGC  49
      ||||| |||||||||||||||||||||||||||||||||||||| |||||
seq2  ATGTGAAACAAAGATGTTCATATTAAAGCCTATAATTTGTCTAAAAAAGC  50

seq1  TTACAA-GAAATTGACAATTACACCAAAGAATATTCAAACTACTCTCTGA  98
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAAGGAAATTGACAATTACACCAAAGAATATTCAAACTACTCTCTGA  100

seq1  TCCTTTGCTATTCTCTTTAACATACAAAGTTCTGAGTTACCTCTCACACG  148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTTGCTATTCTCTTTAACATACAAAGTTCTGAGTTACCTCTCACACG  150

seq1  AAGGATCCCATACCTTACTGCTGAG-AAATAAGAATTCTTTTACCAATCA  197
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  AAGGATCCCATACCTTACTGCTGAGAAAATAAGAATTCTTTTACCAATCA  200

seq1  TCTATCTCCAGATATTAAAAAACTAATAATAATAATAATAATAATAATAA  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATCTCCAGATATTAAAAAACTAATAATAATAATAATAATAATAATAA  250

seq1  TAATAATAAAGATTAAACAGCAAGCAAGGAAAGAAGCCATTTCACAAATC  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAATAAAGATTAAACAGCAAGCAAGGAAAGAAGCCATTTCACAAATC  300

seq1  AGGCCAGTATAGAAAAAAATTCACAGGTGTGCCAGTTTATAGGCTGGAGA  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCAGTATAGAAAAAAATTCACAGGTGTGCCAGTTTATAGGCTGGAGA  350

seq1  AATACATCATGGCTGTCAAATATAGTCAAGAGGCCATGAAAATTGAAGTC  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACATCATGGCTGTCAAATATAGTCAAGAGGCCATGAAAATTGAAGTC  400

seq1  TCTGACACTTGCAACAGATCACAGCTCAGGTGATTTCAGCAGGAGTATAG  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGACACTTGCAACAGATCACAGCTCAGGTGATTTCAGCAGGAGTATAG  450

seq1  GCGTGCTTATGTAAAAGCCAACAAAAGTGAAGGAACAAGGAGCCCTTGTA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGTGCTTATGTAAAAGCCAACAAAAGTGAAGGAACAAGGAGCCCTTGTA  500

seq1  GGCTTAAAACACTCAAAAACTCCCCAAACAATTACTAAAGACATAGTATA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTAAAACACTCAAAAACTCCCCAAACAATTACTAAAGACATAGTATA  550

seq1  TTGTAAAGAATATAGTGCATTCTATTTCTTCTAAGCTCTGGACTGCTTTG  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTAAAGAATATAGTGCATTCTATTTCTTCTAAGCTCTGGACTGCTTTG  600

seq1  AAAGGAACTTAATGGATAGCACAGTCACCAAGCTGTTCTAATTTTAAGAT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGAACTTAATGGATAGCACAGTCACCAAGCTGTTCTAATTTTAAGAT  650

seq1  CTGGGTCCCACATCTGCTAAACACATGCAATCTTACTCCAGTGTTATACC  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGTCCCACATCTGCTAAACACATGCAATCTTACTCCAGTGTTATACC  700

seq1  TGTGGTGGATGTGGCTAAGAGTTTCTACTGAAGAATTTTCTACTTGGACC  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGTGGATGTGGCTAAGAGTTTCTACTGAAGAATTTTCTACTTGGACC  750

seq1  AGTGTTGCTTTGGTTTGAACTTTCTTGTTTGTATCAAATTTGGACATATA  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTTGCTTTGGTTTGAACTTTCTTGTTTGTATCAAATTTGGACATATA  800

seq1  GACAAAGGCTTTCCCACACTCACTGCACAAATAGAGCCTCTCACCACTAT  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAAAGGCTTTCCCACACTCACTGCACAAATAGAGCCTCTCACCACTAT  850

seq1  GAATTC  853
      ||||||
seq2  GAATTC  856