BAC Information

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BAC

Clone NameB6Ng01-077G04
ChromosomeX (Build37)
Map Location 47,255,562 - 47,367,248
singlet/doubletdoublet
Overlap geneLOC100040344, Olfr1323
Upstream geneLOC100040295, Enox2, 1100001E04Rik, LOC100041697, Olfr1320, Olfr1321, Igsf1, Olfr1322
Downstream geneEG665816, Olfr1324, LOC100041788, 6720401G13Rik, 2610018G03Rik, LOC100040422, Rap2c
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-077G04.bB6Ng01-077G04.g
ACCDH893376DH893377
length1,225956
definitionDH893376|Mus musculus domesticus DNA, BAC clone: B6Ng01-077G04, 5' end.DH893377|Mus musculus domesticus DNA, BAC clone: B6Ng01-077G04, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(47,366,021 - 47,367,248)(47,255,562 - 47,256,326)
sequence
gaattctcaactgaggaataccgaatggctgagaagcacctaaaaaacat
tcaacattcttaatcctcagggaaatgcaaatcaaaacaacgctgagatt
ccacctcacatcagtcagaatggctaagatcaaaaattcacgtgacagca
gatactgccgaggttttggagaaagaggaacactcttccattgttggtgg
aactgcaagttaaatattcttatttccaccttttgattagtaaatgggct
tcagagaggtggatcaatttgttcagtgatgttgttaggatatgactaga
tctttggaaaagcattttgtattttaaggtcaggagaatattttgaaaac
acccctttcctggttttgtctcagtggtctttagtgacttgcaagaagtg
caaataccaatagaacatttctggtattgagggaagacagggcactaaaa
ggcagaaaggtttgtagagcacagatgcacattaccatcgaaatttgctc
ttgctacatcccttcatcagatattgagaatggctggtgtcctttgaacg
gtatgactcacagagccatgggaaattagagcgcaaagctgcaaagagct
tcagcgatcaccaagtttaactgttctgttttaatgatgcaagaactagg
accctcaacaagcaagcaatttgcttccaatcatattagttgaaagagag
ggacagagttaccttccagtcattgctaaagggatgaatgcagcaaagga
gaaggtccctatagaataatttccacaaacaagttaagaataaatcaaaa
tggtattatatgaagagtcactgcatcgggccataatatctgggtttcaa
caccagcagtaccactcattcactgaattcgtaactacattatttgtcct
ctctggatgcttgtttcttactttaaaaattagcacattggaagagatga
cttttagaagcctgacacttagtaaacactcaaaacattttagtgaagtc
ttctttacatttcaaatgcttccttattcttagcagagtcaccatgaact
gcctaactgaagaactggaaaaggtaatgaactttttgaagaataggtac
tgtaaatgttggatgcctgcatggacagccacaggaatgcattaaaaaaa
atatccgtaaagtccctcttccaacaaacaggagcgcctgagtagttcaa
caagtaaattccagacacaatcatc
gaattctttgtttagctctgtaccccattttttaatagggatatttggtt
ttctagagtctaacttcttgagttctttatatatattggaaattagtccc
ctatcagatttaggattggtaaatattctttcccaatctgttggaggcct
ttctgtattattgacagtgtcctttgccttatagaaactttacaatttta
tgaggtcccatttgtagattcttgacttttttcttttcttttctttcttt
tttaaattttttattatttttttatatatttttattaggcatttacttca
tttacatttctaatgctatctgaaaagtaccccacacgcttccccaccca
ctcactccctcacgcactcactcccacttcttggccctggcgttcccctg
tactgaggcagataaagtttgcacaagcaatgggcttctctttccactga
tggcctactaggccagcttctgatacatatgcagctagagacacgagctg
tggggagtactgggtagttcatattattgttccacctatagggttgcaga
tccatttagctccttgttacttctctagctcctcctttggaggccctgtg
atccattcaatagctaactgtgtgccacacttctgtgtttgctaggcccc
ggcacagtctcacaagagacatccatatcagagttctttcagcaaaatct
tgctagtgtatgcaatggtgtcagtgtttggaggctgattatgggatgga
tccctggatatggcagtctacagatggcccaacctttcgtctcagctcca
actgtgtctctgtaactccttccatgggtgttttgttcccaattctaaga
agaggcaaactgtccacacttttgtctttgttcttcttgggttccatgtg
tttggcaaatatatcttatatcttggtatctagtttctgggctatatcca
ctatta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_47366021_47367248
seq2: B6Ng01-077G04.b_46_1270 (reverse)

seq1  GATGA-TGTGTCTTGGATATTTACTTGTTGAAACTACTCAGGCGCTCCTG  49
      ||||| |||||| |||| |||||||||||| |||||||||||||||||||
seq2  GATGATTGTGTC-TGGA-ATTTACTTGTTG-AACTACTCAGGCGCTCCTG  47

seq1  TTTGTTGAAGAAGTGACCTTTTACGGGTATTTTTTTTAATGCATTCCTGT  99
      ||||||| |  || |||  ||||||| |||||||||||||||||||||||
seq2  TTTGTTGGAAGAGGGAC--TTTACGGATATTTTTTTTAATGCATTCCTGT  95

seq1  GCTTGTCCATGCAGGCAT-CTACATTTACAGTACCTATTCTTCAAAAAGT  148
      |  ||||||||||||||| | |||||||||||||||||||||||||||||
seq2  GGCTGTCCATGCAGGCATCCAACATTTACAGTACCTATTCTTCAAAAAGT  145

seq1  TCATTACCTTTTCCAGTTCTTCAGTTAGGCAGTTCATGGTGACTCTGCTA  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTACCTTTTCCAGTTCTTCAGTTAGGCAGTTCATGGTGACTCTGCTA  195

seq1  AGAATAAGGAAGCATTTGAAATGTAAAGAAGACTTCACTAAAATGTTTTG  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATAAGGAAGCATTTGAAATGTAAAGAAGACTTCACTAAAATGTTTTG  245

seq1  AGTGTTTACTAAGTGTCAGGCTTCTAAAAGTCATCTCTTCCAATGTGCTA  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTTTACTAAGTGTCAGGCTTCTAAAAGTCATCTCTTCCAATGTGCTA  295

seq1  ATTTTTAAAGTAAGAAACAAGCATCCAGAGAGGACAAATAATGTAGTTAC  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTAAAGTAAGAAACAAGCATCCAGAGAGGACAAATAATGTAGTTAC  345

seq1  GAATTCAGTGAATGAGTGGTACTGCTGGTGTTGAAACCCAGATATTATGG  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTGAATGAGTGGTACTGCTGGTGTTGAAACCCAGATATTATGG  395

seq1  CCCGATGCAGTGACTCTTCATATAATACCATTTTGATTTATTCTTAACTT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCGATGCAGTGACTCTTCATATAATACCATTTTGATTTATTCTTAACTT  445

seq1  GTTTGTGGAAATTATTCTATAGGGACCTTCTCCTTTGCTGCATTCATCCC  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGTGGAAATTATTCTATAGGGACCTTCTCCTTTGCTGCATTCATCCC  495

seq1  TTTAGCAATGACTGGAAGGTAACTCTGTCCCTCTCTTTCAACTAATATGA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGCAATGACTGGAAGGTAACTCTGTCCCTCTCTTTCAACTAATATGA  545

seq1  TTGGAAGCAAATTGCTTGCTTGTTGAGGGTCCTAGTTCTTGCATCATTAA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAAGCAAATTGCTTGCTTGTTGAGGGTCCTAGTTCTTGCATCATTAA  595

seq1  AACAGAACAGTTAAACTTGGTGATCGCTGAAGCTCTTTGCAGCTTTGCGC  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGAACAGTTAAACTTGGTGATCGCTGAAGCTCTTTGCAGCTTTGCGC  645

seq1  TCTAATTTCCCATGGCTCTGTGAGTCATACCGTTCAAAGGACACCAGCCA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAATTTCCCATGGCTCTGTGAGTCATACCGTTCAAAGGACACCAGCCA  695

seq1  TTCTCAATATCTGATGAAGGGATGTAGCAAGAGCAAATTTCGATGGTAAT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCAATATCTGATGAAGGGATGTAGCAAGAGCAAATTTCGATGGTAAT  745

seq1  GTGCATCTGTGCTCTACAAACCTTTCTGCCTTTTAGTGCCCTGTCTTCCC  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCATCTGTGCTCTACAAACCTTTCTGCCTTTTAGTGCCCTGTCTTCCC  795

seq1  TCAATACCAGAAATGTTCTATTGGTATTTGCACTTCTTGCAAGTCACTAA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATACCAGAAATGTTCTATTGGTATTTGCACTTCTTGCAAGTCACTAA  845

seq1  AGACCACTGAGACAAAACCAGGAAAGGGGTGTTTTCAAAATATTCTCCTG  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCACTGAGACAAAACCAGGAAAGGGGTGTTTTCAAAATATTCTCCTG  895

seq1  ACCTTAAAATACAAAATGCTTTTCCAAAGATCTAGTCATATCCTAACAAC  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTAAAATACAAAATGCTTTTCCAAAGATCTAGTCATATCCTAACAAC  945

seq1  ATCACTGAACAAATTGATCCACCTCTCTGAAGCCCATTTACTAATCAAAA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACTGAACAAATTGATCCACCTCTCTGAAGCCCATTTACTAATCAAAA  995

seq1  GGTGGAAATAAGAATATTTAACTTGCAGTTCCACCAACAATGGAAGAGTG  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGAAATAAGAATATTTAACTTGCAGTTCCACCAACAATGGAAGAGTG  1045

seq1  TTCCTCTTTCTCCAAAACCTCGGCAGTATCTGCTGTCACGTGAATTTTTG  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTCTTTCTCCAAAACCTCGGCAGTATCTGCTGTCACGTGAATTTTTG  1095

seq1  ATCTTAGCCATTCTGACTGATGTGAGGTGGAATCTCAGCGTTGTTTTGAT  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTAGCCATTCTGACTGATGTGAGGTGGAATCTCAGCGTTGTTTTGAT  1145

seq1  TTGCATTTCCCTGAGGATTAAGAATGTTGAATGTTTTTTAGGTGCTTCTC  1198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCATTTCCCTGAGGATTAAGAATGTTGAATGTTTTTTAGGTGCTTCTC  1195

seq1  AGCCATTCGGTATTCCTCAGTTGAGAATTC  1228
      ||||||||||||||||||||||||||||||
seq2  AGCCATTCGGTATTCCTCAGTTGAGAATTC  1225

seq1: chrX_47255562_47256326
seq2: B6Ng01-077G04.g_69_833

seq1  GAATTCTTTGTTTAGCTCTGTACCCCATTTTTTAATAGGGATATTTGGTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGTTTAGCTCTGTACCCCATTTTTTAATAGGGATATTTGGTT  50

seq1  TTCTAGAGTCTAACTTCTTGAGTTCTTTATATATATTGGAAATTAGTCCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAGAGTCTAACTTCTTGAGTTCTTTATATATATTGGAAATTAGTCCC  100

seq1  CTATCAGATTTAGGATTGGTAAATATTCTTTCCCAATCTGTTGGAGGCCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCAGATTTAGGATTGGTAAATATTCTTTCCCAATCTGTTGGAGGCCT  150

seq1  TTCTGTATTATTGACAGTGTCCTTTGCCTTATAGAAACTTTACAATTTTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGTATTATTGACAGTGTCCTTTGCCTTATAGAAACTTTACAATTTTA  200

seq1  TGAGGTCCCATTTGTAGATTCTTGACTTTTTTCTTTTCTTTTCTTTCTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGTCCCATTTGTAGATTCTTGACTTTTTTCTTTTCTTTTCTTTCTTT  250

seq1  TTTAAATTTTTTATTATTTTTTTATATATTTTTATTAGGCATTTACTTCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAATTTTTTATTATTTTTTTATATATTTTTATTAGGCATTTACTTCA  300

seq1  TTTACATTTCTAATGCTATCTGAAAAGTACCCCACACGCTTCCCCACCCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACATTTCTAATGCTATCTGAAAAGTACCCCACACGCTTCCCCACCCA  350

seq1  CTCACTCCCTCACGCACTCACTCCCACTTCTTGGCCCTGGCGTTCCCCTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACTCCCTCACGCACTCACTCCCACTTCTTGGCCCTGGCGTTCCCCTG  400

seq1  TACTGAGGCAGATAAAGTTTGCACAAGCAATGGGCTTCTCTTTCCACTGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGAGGCAGATAAAGTTTGCACAAGCAATGGGCTTCTCTTTCCACTGA  450

seq1  TGGCCTACTAGGCCAGCTTCTGATACATATGCAGCTAGAGACACGAGCTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCTACTAGGCCAGCTTCTGATACATATGCAGCTAGAGACACGAGCTG  500

seq1  TGGGGAGTACTGGGTAGTTCATATTATTGTTCCACCTATAGGGTTGCAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGAGTACTGGGTAGTTCATATTATTGTTCCACCTATAGGGTTGCAGA  550

seq1  TCCATTTAGCTCCTTGTTACTTCTCTAGCTCCTCCTTTGGAGGCCCTGTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATTTAGCTCCTTGTTACTTCTCTAGCTCCTCCTTTGGAGGCCCTGTG  600

seq1  ATCCATTCAATAGCTAACTGTGTGCCACACTTCTGTGTTTGCTAGGCCCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCATTCAATAGCTAACTGTGTGCCACACTTCTGTGTTTGCTAGGCCCC  650

seq1  GGCACAGTCTCACAAGAGACATCCATATCAGAGTTCTTTCAGCAAAATCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCACAGTCTCACAAGAGACATCCATATCAGAGTTCTTTCAGCAAAATCT  700

seq1  TGCTAGTGTATGCAATGGTGTCAGTGTTTGGAGGCTGATTATGGGATGGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTAGTGTATGCAATGGTGTCAGTGTTTGGAGGCTGATTATGGGATGGA  750

seq1  TCCCTGGATATGGCA  765
      |||||||||||||||
seq2  TCCCTGGATATGGCA  765