BAC Information

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BAC

Clone NameB6Ng01-083C14
ChromosomeX (Build37)
Map Location 30,836,633 - 30,837,723
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC664996, LOC100039467, LOC100039481, LOC100039224, LOC100039500, LOC100040448, LOC100040458, LOC100040467, EG546176, LOC100040482, LOC629997, 1700017G21Rik, LOC665014, EG546205
Downstream geneLOC100040533, LOC100039328, LOC100040552, LOC100040575, LOC100040585, LOC100039362, LOC100040606, LOC100040612, LOC673784, LOC100040650, LOC100040662, LOC100039419, LOC100039429, LOC100040698, LOC630028, LOC100040722
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-083C14.bB6Ng01-083C14.g
ACCDH897504DH897505
length1,0751,129
definitionDH897504|Mus musculus domesticus DNA, BAC clone: B6Ng01-083C14, 5' end.DH897505|Mus musculus domesticus DNA, BAC clone: B6Ng01-083C14, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctctaacttcttggaattctttcttatttcaaccctgaccaagta
tcattcagcagaaagtttttcagttttcatgagtatgtggtctttctgtt
gttttggttgttattgacatctagccttatcctgatgttatctgatagaa
tgcatgagagtattcccattttcttgtatctgttgatgcttgttttatga
ccaattatattatcagttttggggaatgttccatgaggaactcagaagaa
tgtatattctcttgttttggcatgaagtgttctattgatatctattaaat
ccatttgggtcaagacttctgttagtttcactgtgtctctgttattttgt
ttttctttttttctctctctctttttttttttttttgggatgacctgttt
ctgcaccttagcactggtggtctcagctagaagacttgaagactggccag
cacacagatataggcatttctaattttatgtacttgcaacttgatcatac
agcatgcaagaatgtgttagagccaatgagatttcaaaaaatataattga
aaaaataaacaaaggcaattaagtacacaactgtgttcagaatttattat
tgacgggtacttgagttcaggagttaaaaattcatttgatgaacttttac
cttgggtttttttttatactactcaaatcaggcctatcaatttgtattca
agtgaggttgttttgcatgtgtgttgacactcagcatccccctctacaga
gacacagtggctgccttactccagaaggatctgtgtctaatttagttcat
atttctttctttcttttttttcccatttttattaggtatttagctcattt
acatttctaatgctataccaaaagtcccccatacccacccacaccactcc
cctacccacccactccccctttttggccctggcattccctgtactgggca
tataaagtttgcaagtcaatggcctctcatgcagtgatgtcgactagcat
cttttgaaacatatgcagctagagtcagagctccaggtactgctagtcat
attgtgtccacctataggttgcagt
gaattcctgatctttccaacacttttatcatgaatgggtgttggatcttg
tcgaatgctttttctgcatctaacgagatgatcatgtggtttttgtcttt
gagtttgtttatataatggattacattgatggattttcgtatattaaacc
atccctgcatccctggaataaaacctacttggtcaggatggatgattgct
ttaatgtgttcttggattcggttagcgagaattttattgaggatttttgc
atcgatattcataatagaaattggtctgaagttctctatctttgttgggt
ctttctgtggtttaggtatcagagtaatagtggcttcataaaatgaattg
ggtagagtaccttctacttctattttgtgaaatagtttgtgcagaactgg
aattagatcttctttgaaggtctgatagaactctgcactaaacccgtctg
gtcctgggctttttttggctaggagtctattgataactgcttctatttct
ttaggtgatatgggactgtttagatggtcaacttgatcctgattcaactt
tggtacctggtatctgtccagaaatttgtccatttcgtccaggttttcca
gttttgttgagtatagccttttgtagaaggatctgatggtgttttggatt
tcttcaggatctgttgttatgtctcccttttcattttctgattttgttaa
tttgggattttgtccctgttgcccttttagtgagtctagctaagggttta
tctatctttgttgatttttttcatgaaccaactcatcgtttggttaattc
tttgaatagtttcttgtttccactttggttgatttcacccctgagttttg
attattttcctgccgtctactctcttggggtgaattttgcttcctttttt
tctagagctttagatgtgttgtcaagctgctagttatgctctctcccgtt
tctcttggagcactcagagctatgagtttccttctagaaatgctcatgtg
cccaatagtttgggtacgtgtgctcattttcataactctaaaagcttaaa
ttctttctttattctccttgaccaagtacttgaaagagttgttgttcgtt
tcattgaattttgcttttccataataaag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_30836633_30837723
seq2: B6Ng01-083C14.b_45_1119

seq1  GAATTCTCTAACTTCTTGGAATTCTTTCTTATTTCAACCCTGACCAAGTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTAACTTCTTGGAATTCTTTCTTATTTCAACCCTGACCAAGTA  50

seq1  TCATTCAGCAGAAAGTTTTTCAGTTTTCATGAGTATGTGGTCTTTCTGTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTCAGCAGAAAGTTTTTCAGTTTTCATGAGTATGTGGTCTTTCTGTT  100

seq1  GTTTTGGTTGTTATTGACATCTAGCCTTATCCTGATGTTATCTGATAGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTGGTTGTTATTGACATCTAGCCTTATCCTGATGTTATCTGATAGAA  150

seq1  TGCATGAGAGTATTCCCATTTTCTTGTATCTGTTGATGCTTGTTTTATGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATGAGAGTATTCCCATTTTCTTGTATCTGTTGATGCTTGTTTTATGA  200

seq1  CCAATTATATTATCAGTTTTGGGGAATGTTCCATGAGGAACTCAGAAGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATTATATTATCAGTTTTGGGGAATGTTCCATGAGGAACTCAGAAGAA  250

seq1  TGTATATTCTCTTGTTTTGGCATGAAGTGTTCTATTGATATCTATTAAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATATTCTCTTGTTTTGGCATGAAGTGTTCTATTGATATCTATTAAAT  300

seq1  CCATTTGGGTCAAGACTTCTGTTAGTTTCACTGTGTCTCTGTTATTTTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTTGGGTCAAGACTTCTGTTAGTTTCACTGTGTCTCTGTTATTTTGT  350

seq1  TTTTCTTTTTTTCTCTCTCTCTTTTTTTTTTTTTTTGGGATGACCTGTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTTTTTTTCTCTCTCTCTTTTTTTTTTTTTTTGGGATGACCTGTTT  400

seq1  CTGCACCTTAGCACTGGTGGTCTCAGCTAGAAGACTTGAAGACTGGCCAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCACCTTAGCACTGGTGGTCTCAGCTAGAAGACTTGAAGACTGGCCAG  450

seq1  CACACAGATATAGGCATTTCTAATTTTATGTACTTGCAACTTGATCATAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACAGATATAGGCATTTCTAATTTTATGTACTTGCAACTTGATCATAC  500

seq1  AGCATGCAAGAATGTGTTAGAGCCAATGAGATTTCAAAAAATATAATTGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATGCAAGAATGTGTTAGAGCCAATGAGATTTCAAAAAATATAATTGA  550

seq1  AAAAATAAACAAAGGCAATTAAGTACACAACTGTGTTCAGAATTTATTAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATAAACAAAGGCAATTAAGTACACAACTGTGTTCAGAATTTATTAT  600

seq1  TGACGGGTACTTGAGTTCAGGAGTTAAAAATTCATTTGATGAACTTTTAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACGGGTACTTGAGTTCAGGAGTTAAAAATTCATTTGATGAACTTTTAC  650

seq1  CTTGGGTTTTTTTTTATACTACTCAAATCAGGCCTATCAATTTGTATTCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGGTTTTTTTTTATACTACTCAAATCAGGCCTATCAATTTGTATTCA  700

seq1  AGTGAGGTTGTTTTGCATGTGTGTTGACACTCAGCATCCCCCTCTACAGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGAGGTTGTTTTGCATGTGTGTTGACACTCAGCATCCCCCTCTACAGA  750

seq1  GACACAGTGGCTGCCTTACTCCAGAAGGATCTGTGTCTAATTTAGTTCAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACAGTGGCTGCCTTACTCCAGAAGGATCTGTGTCTAATTTAGTTCAT  800

seq1  ATTTCTTTCTTTCTTTTTTTTCCCATTTTTATTAGGTATTTAGCTCATTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTTTCTTTCTTTTTTTTCCCATTTTTATTAGGTATTTAGCTCATTT  850

seq1  ACATTTCTAATGCTATACCAAAAGTCCCCCATACCCACCCACACCCACTC  900
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  ACATTTCTAATGCTATACCAAAAGTCCCCCATACCCACCCACA-CCACTC  899

seq1  CCCTACCCACCCACTCCCCCTTTTTGGCCCTGGCATTCCCCTGTACTGGG  950
      ||||||||||||||||||||||||||||||||||||| ||||||||| ||
seq2  CCCTACCCACCCACTCCCCCTTTTTGGCCCTGGCATT-CCCTGTACT-GG  947

seq1  GCATATAAAGTTTGCAAGTCCAATGGGCCTCTCATTGCAGTGATGGCCGA  1000
      ||||||||||||||||||| |||| ||||||||| ||||||||| | |||
seq2  GCATATAAAGTTTGCAAGT-CAAT-GGCCTCTCA-TGCAGTGAT-GTCGA  993

seq1  CTAGGCCATCTTTTGATACATATGCAGCTAGAGTCAAGAGCTCCAGGGTA  1050
      ||||  |||||||||| |||||||||||||||||| ||||||||| ||||
seq2  CTAG--CATCTTTTGAAACATATGCAGCTAGAGTC-AGAGCTCCA-GGTA  1039

seq1  CTGCTTAGTTCATATTGTTGTTCCACCTATAGGGTTGCAGT  1091
      |||| ||| |||||||||   |||||||||| |||||||||
seq2  CTGC-TAG-TCATATTGT--GTCCACCTATA-GGTTGCAGT  1075