BAC Information

Click to search

BAC

Clone NameB6Ng01-084F16
ChromosomeX (Build37)
Map Location 110,299,701 - 110,428,958
singlet/doubletdoublet
Overlap geneEG664918, Dach2
Upstream gene4933403O08Rik, EG385407, Apool, Satl1, EG623341, 2010106E10Rik, Zfp711, Pof1b, LOC623412, EG623428, LOC100039112, Chm
Downstream geneLOC237016, EG664945, EG634881, LOC100039201
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-084F16.bB6Ng01-084F16.g
ACCDH898339DH898340
length1,2291,104
definitionDH898339|Mus musculus domesticus DNA, BAC clone: B6Ng01-084F16, 5' end.DH898340|Mus musculus domesticus DNA, BAC clone: B6Ng01-084F16, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(110,427,724 - 110,428,958)(110,299,701 - 110,300,810)
sequence
gaattctctctccagaggtaactcttcaagtatatgtttaaaataccact
gctttcaacaagatcttgaatagagcaattattcttaggaaggaatctca
acgttgttgttttctgatatcagtttccttgaagtgtttatattatatca
ttgtactttcattcagctttttatttcatttttatttttggaaattatga
tatggatatatcatttctcccttacctttcctcccctcaaacactctcac
atcctccccttgctctttctcaaattcatggcttcttttattgctattgc
atatatatgtgcgtatatatttctaaatataacatgttcagtattctgta
ggttactcgtacaatttaaggactggccttttttaactggacaaccaatt
tgggttctctcccctagaaaaagactgtttctctaactcttagcattcct
tagatgcccatagttctttgtatagagttaaggccttttggatgttttcc
ctacccacttttgcatatctattggtgtcatcttaccaatgattcatgtt
gaataaaatcttcatttgaaggtttcatttcttcagacttgaaacattag
atgtgtgttggcatgtttctctccttttctttcttgcattagatattaag
gtccatttacctaaaaatattctcactatgatgttttgaattgtttttcc
taattgagatagcccagttttagtatattcatacatctttttccaatgct
aaataaaagggggaaacaagattttttttgaatccaatccaacagagcta
aaataaaattctaacaatggaattgccttttcacccttaaacaagagtct
taatagcagatgttactacatctggcttcccttgttattctccatctgca
gaaattaaaactcactcagaatccatgacagacctaatgggagtttgcaa
atgctgaccaaatccttcttcccaactactctgttaggatgccaggtgaa
cggctggacaagccccacagagcaaatttgtttcttaggtattagcaaga
ttaagataaaaggtcaccaactcttagctttcctcagcaatgatttacat
gaggaacctgattgaaagcttaattatttgctccatccatcaaacattca
agttcaagagccctgaaaggagaactattgtggagttttaaatggtaaca
tagagaacaggcttcttagtagcttcctt
gaattccaaagagcctcctagcaatgtaagttgcaacattaactttgctt
tagagatggaggtgagagtgggggactgggagtgtaaagagtattaaaga
atagtagacggttaataaatcttttgtttcagaatctgactttctgccaa
attaagaaaaacccaaacaagtttctcctacgacgttgcagagaaatgat
taaaataaaatagacttaatatagaaatgggtatatttgataagggagct
taagactgtctatgccaagcagttaatataactcttatgagcattttcaa
ggtctgtcagctcccattctaccttatttaaaaagtatgtttgtctgaaa
atagtaaagcaaaaaaataggcagaggggtacactggagtaagtaaagta
ctttttttaatctgaggaattattcctatagttatttccaagagtttcaa
aataaatttgaatgcaagatgtggtactgtgacaatcctttaaaccatct
actatctgggatgtcatctacttatcgttctccatacactgttttcttct
caatctctgtgacctccacactctagcttttccctcagcaaggaatgatc
tcctcaacttctaggtaatatgcttaataacaaggaagggatacattaaa
cattattaaagcattagctaatgtatatgtttcaaaagaacacatgattc
cacagaattatgcacaactctatgtatcagttaaaaataataaaataaag
gagagtatagaaatgtagcccaatatttaagatcacagactacacccata
tggcaagcttacaacctccaattccaagggatctaccatcctctcctggg
cctcccaggcaccatatgtacatactacacaaacacactgcacattagat
aaacagctttttagaataataaacataaaaagaaaagcaaaaactttggg
ggcaaagtaaacaaaattttagagtttctttttttttttttttttttagg
acaggtatcataaatgtaggttaaggcagcctaaaatgctcagcctttaa
gtcctgaaattacagatttaccgctagcaaaggctttgggaaacattaag
aaag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_110427724_110428958
seq2: B6Ng01-084F16.b_49_1277 (reverse)

seq1  AAGGAAGCTACTTAAGAAGCCCCTGCTCTA-GTTACCATTTTTAAAAACT  49
      ||||||||||| |||||||||  | ||||| ||||||||||   ||||||
seq2  AAGGAAGCTAC-TAAGAAGCCTGTTCTCTATGTTACCATTT---AAAACT  46

seq1  CCAC-ATAG-TCTCCTTTCAGGGGCTCTTTGACCTTGAATGTTTGAT-GA  96
      |||| |||| |||||||||| |||||| |||| |||||||||||||| ||
seq2  CCACAATAGTTCTCCTTTCA-GGGCTC-TTGAACTTGAATGTTTGATGGA  94

seq1  T-GAGCAAATAGTTAAGCTTTCAATCAGGTT-CTCATGTAAAATCATTGC  144
      | ||||||||| ||||||||||||||||||| ||||||| ||||||||||
seq2  TGGAGCAAATAATTAAGCTTTCAATCAGGTTCCTCATGT-AAATCATTGC  143

seq1  TGAGGAAAGCTAAGAAGTTGGTGACC-TCTATCTTAATTCTTTGCTAATT  193
      |||||||||||||| ||||||||||| | |||||||||   ||||||| |
seq2  TGAGGAAAGCTAAG-AGTTGGTGACCTTTTATCTTAAT--CTTGCTAA-T  189

seq1  ACCTAGGAAACAAATTTGCTCTGGTGGGGCTTGTCCAGCCGTTCACCTGG  243
      ||||| |||||||||||||||| |||||||||||||||||||||||||||
seq2  ACCTAAGAAACAAATTTGCTCT-GTGGGGCTTGTCCAGCCGTTCACCTGG  238

seq1  CATCCTAACAGAGTAGTTGGGAAGAAGGATTTGGTCAGCATTTGCAAACT  293
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCTAACAGAGTAGTTGGGAAGAAGGATTTGGTCAGCATTTGCAAACT  288

seq1  CCCATTAGGTCCTGTCATGGATTCTGAGTGAGTTTTAATTTCTGCAGATG  343
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  CCCATTAGGT-CTGTCATGGATTCTGAGTGAGTTTTAATTTCTGCAGATG  337

seq1  GAGAATAACAAGGGAAGCCAGATGTAGTAACATCTGCTATTAAGACTCTT  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAATAACAAGGGAAGCCAGATGTAGTAACATCTGCTATTAAGACTCTT  387

seq1  GTTTAAGGGTGAAAAGGCAATTCCATTGTTAGAATTTTATTTTAGCTCTG  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTAAGGGTGAAAAGGCAATTCCATTGTTAGAATTTTATTTTAGCTCTG  437

seq1  TTGGATTGGATTCAAAAAAAATCTTGTTTCCCCCTTTTATTTAGCATTGG  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGATTGGATTCAAAAAAAATCTTGTTTCCCCCTTTTATTTAGCATTGG  487

seq1  AAAAAGATGTATGAATATACTAAAACTGGGCTATCTCAATTAGGAAAAAC  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAGATGTATGAATATACTAAAACTGGGCTATCTCAATTAGGAAAAAC  537

seq1  AATTCAAAACATCATAGTGAGAATATTTTTAGGTAAATGGACCTTAATAT  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCAAAACATCATAGTGAGAATATTTTTAGGTAAATGGACCTTAATAT  587

seq1  CTAATGCAAGAAAGAAAAGGAGAGAAACATGCCAACACACATCTAATGTT  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATGCAAGAAAGAAAAGGAGAGAAACATGCCAACACACATCTAATGTT  637

seq1  TCAAGTCTGAAGAAATGAAACCTTCAAATGAAGATTTTATTCAACATGAA  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGTCTGAAGAAATGAAACCTTCAAATGAAGATTTTATTCAACATGAA  687

seq1  TCATTGGTAAGATGACACCAATAGATATGCAAAAGTGGGTAGGGAAAACA  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTGGTAAGATGACACCAATAGATATGCAAAAGTGGGTAGGGAAAACA  737

seq1  TCCAAAAGGCCTTAACTCTATACAAAGAACTATGGGCATCTAAGGAATGC  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAAAAGGCCTTAACTCTATACAAAGAACTATGGGCATCTAAGGAATGC  787

seq1  TAAGAGTTAGAGAAACAGTCTTTTTCTAGGGGAGAGAACCCAAATTGGTT  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAGTTAGAGAAACAGTCTTTTTCTAGGGGAGAGAACCCAAATTGGTT  837

seq1  GTCCAGTTAAAAAAGGCCAGTCCTTAAATTGTACGAGTAACCTACAGAAT  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCAGTTAAAAAAGGCCAGTCCTTAAATTGTACGAGTAACCTACAGAAT  887

seq1  ACTGAACATGTTATATTTAGAAATATATACGCACATATATATGCAATAGC  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGAACATGTTATATTTAGAAATATATACGCACATATATATGCAATAGC  937

seq1  AATAAAAGAAGCCATGAATTTGAGAAAGAGCAAGGGGAGGATGTGAGAGT  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAAAGAAGCCATGAATTTGAGAAAGAGCAAGGGGAGGATGTGAGAGT  987

seq1  GTTTGAGGGGAGGAAAGGTAAGGGAGAAATGATATATCCATATCATAATT  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGAGGGGAGGAAAGGTAAGGGAGAAATGATATATCCATATCATAATT  1037

seq1  TCCAAAAATAAAAATGAAATAAAAAGCTGAATGAAAGTACAATGATATAA  1093
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAAAAATAAAAATGAAATAAAAAGCTGAATGAAAGTACAATGATATAA  1087

seq1  TATAAACACTTCAAGGAAACTGATATCAGAAAACAACAACGTTGAGATTC  1143
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAACACTTCAAGGAAACTGATATCAGAAAACAACAACGTTGAGATTC  1137

seq1  CTTCCTAAGAATAATTGCTCTATTCAAGATCTTGTTGAAAGCAGTGGTAT  1193
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCTAAGAATAATTGCTCTATTCAAGATCTTGTTGAAAGCAGTGGTAT  1187

seq1  TTTAAACATATACTTGAAGAGTTACCTCTGGAGAGAGAATTC  1235
      ||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAACATATACTTGAAGAGTTACCTCTGGAGAGAGAATTC  1229

seq1: chrX_110299701_110300810
seq2: B6Ng01-084F16.g_69_1172

seq1  GAATTCCAAAGAGCCTCCTAGCAATGTAAGTTGCAACATTAACTTTGCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAAAGAGCCTCCTAGCAATGTAAGTTGCAACATTAACTTTGCTT  50

seq1  TAGAGATGGAGGTGAGAGTGGGGGACTGGGAGTGTAAAGAGTATTAAAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGATGGAGGTGAGAGTGGGGGACTGGGAGTGTAAAGAGTATTAAAGA  100

seq1  ATAGTAGACGGTTAATAAATCTTTTGTTTCAGAATCTGACTTTCTGCCAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTAGACGGTTAATAAATCTTTTGTTTCAGAATCTGACTTTCTGCCAA  150

seq1  ATTAAGAAAAACCCAAACAAGTTTCTCCTACGACGTTGCAGAGAAATGAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAGAAAAACCCAAACAAGTTTCTCCTACGACGTTGCAGAGAAATGAT  200

seq1  TAAAATAAAATAGACTTAATATAGAAATGGGTATATTTGATAAGGGAGCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATAAAATAGACTTAATATAGAAATGGGTATATTTGATAAGGGAGCT  250

seq1  TAAGACTGTCTATGCCAAGCAGTTAATATAACTCTTATGAGCATTTTCAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGACTGTCTATGCCAAGCAGTTAATATAACTCTTATGAGCATTTTCAA  300

seq1  GGTCTGTCAGCTCCCATTCTACCTTATTTAAAAAGTATGTTTGTCTGAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTGTCAGCTCCCATTCTACCTTATTTAAAAAGTATGTTTGTCTGAAA  350

seq1  ATAGTAAAGCAAAAAAATAGGCAGAGGGGTACACTGGAGTAAGTAAAGTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTAAAGCAAAAAAATAGGCAGAGGGGTACACTGGAGTAAGTAAAGTA  400

seq1  CTTTTTTTAATCTGAGGAATTATTCCTATAGTTATTTCCAAGAGTTTCAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTTTAATCTGAGGAATTATTCCTATAGTTATTTCCAAGAGTTTCAA  450

seq1  AATAAATTTGAATGCAAGATGTGGTACTGTGACAATCCTTTAAACCATCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAATTTGAATGCAAGATGTGGTACTGTGACAATCCTTTAAACCATCT  500

seq1  ACTATCTGGGATGTCATCTACTTATCGTTCTCCATACACTGTTTTCTTCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATCTGGGATGTCATCTACTTATCGTTCTCCATACACTGTTTTCTTCT  550

seq1  CAATCTCTGTGACCTCCACACTCTAGCTTTTCCCTCAGCAAGGAATGATC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATCTCTGTGACCTCCACACTCTAGCTTTTCCCTCAGCAAGGAATGATC  600

seq1  TCCTCAACTTCTAGGTAATATGCTTAATAACAAGGAAGGGATACATTAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCAACTTCTAGGTAATATGCTTAATAACAAGGAAGGGATACATTAAA  650

seq1  CATTATTAAAGCATTAGCTAATGTATATGTTTCAAAAGAACACATGATTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTATTAAAGCATTAGCTAATGTATATGTTTCAAAAGAACACATGATTC  700

seq1  CACAGAATTATGCACAACTCTATGTATCAGTTAAAAATAATAAAATAAAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGAATTATGCACAACTCTATGTATCAGTTAAAAATAATAAAATAAAG  750

seq1  GAGAGTATAGAAATGTAGCCCAATAATTAAGATCACAGACTACACCCATA  800
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  GAGAGTATAGAAATGTAGCCCAATATTTAAGATCACAGACTACACCCATA  800

seq1  TGGCAAGCTTACAACCTCCAATTCCAAGGGATCTACCATCCTCTCCT-GG  849
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  TGGCAAGCTTACAACCTCCAATTCCAAGGGATCTACCATCCTCTCCTGGG  850

seq1  CCTCCCAAGGCACCATATGTACATACTACACAAACACACTGCACATTAGA  899
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCC-AGGCACCATATGTACATACTACACAAACACACTGCACATTAGA  899

seq1  TAAACAAGCTTTTTAGAATAATAAACATAAAAAGAAAAGCAAAAAACTTT  949
      ||||| |||||||||||||||||||||||||||||||||| |||||||||
seq2  TAAAC-AGCTTTTTAGAATAATAAACATAAAAAGAAAAGC-AAAAACTTT  947

seq1  GGGGGCAAAGTAAACAAAATTTTAAGAGTTTCTTTTTTTTTTTTTTTTTT  999
      ||||||||||||||||||||||| |||||||| |||||||||||||||||
seq2  GGGGGCAAAGTAAACAAAATTTT-AGAGTTTC-TTTTTTTTTTTTTTTTT  995

seq1  TTAGGACAAGGTATCATAAATGTAGGTTAGGGCAGCCTAGAATGCTCAGC  1049
      ||||||| ||||||||||||||||||||| ||||||||| ||||||||||
seq2  TTAGGAC-AGGTATCATAAATGTAGGTTAAGGCAGCCTAAAATGCTCAGC  1044

seq1  TTTCTAAGTCCTGAAATTACAGATTTACAGCTAGCAAAGGCTTTGGGATA  1099
       || |||||||||||||||||||||||| ||||||||||||||||||| |
seq2  CTT-TAAGTCCTGAAATTACAGATTTACCGCTAGCAAAGGCTTTGGGAAA  1093

seq1  CTATAAGAAAG  1110
      |  ||||||||
seq2  CATTAAGAAAG  1104