MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-085N05
Chromosome	X (Build37)
Map Location	142,546,194 - 142,547,406
singlet/doublet	singlet
Overlap gene	none
Upstream gene	Zcchc16, LOC623591, Lhfpl1, Amot, EG434860, LOC100039313, LOC623697, LOC623731, LOC237096
Downstream gene	LOC100039558, EG666730, EG245663, Htr2c
Link	Open Mouse BAC browser

Click to get alignment info.

name	Zcchc16 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:619287 MGI:3588192
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC623591 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:623591
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 25 Proteins pseudo : _no_value

name	Lhfpl1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:237091 MGI:1891214
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Amot (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:27494 MGI:108440
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG434860 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:434860 MGI:3646381
definition	note : predicted gene, EG434860 pseudo : _no_value

name	LOC100039313 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039313
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	LOC623697 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:623697
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 11 Proteins pseudo : _no_value

name	LOC623731 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:623731
definition	note : ribosomal RNA processing 15 homolog (S. cerevisiae) pseudogene pseudo : _no_value

name	LOC237096 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:237096
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 Proteins pseudo : _no_value

name	LOC100039558 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039558
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 293 ESTs, 27 Proteins pseudo : _no_value

name	EG666730 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:666730 MGI:3647364
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 86 ESTs, 4 Proteins pseudo : _no_value

name	EG245663 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:245663 MGI:3646769
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 13 Proteins pseudo : _no_value

name	Htr2c (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:15560 MGI:96281
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Zcchc16 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142361727 GeneID:619287 MGI:3588192
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : zinc finger, CCHC domain containing 16 transcript_id : NM_001033795.3

name	Lhfpl1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:34328432 GeneID:237091 MGI:1891214
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : lipoma HMGIC fusion partner-like 1 transcript_id : NM_178358.3

name	Amot (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:125346195 GeneID:27494 MGI:108440
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : angiomotin transcript_id : NM_153319.2

name	Htr2c (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142373665 GeneID:15560 MGI:96281
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : 5-hydroxytryptamine (serotonin) receptor 2C transcript_id : NM_008312.3

name	Zcchc16 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124486592 GeneID:619287 MGI:3588192
definition	GO_function : GO:0008270 - zinc ion binding [Evidence IEA] codon_start : 1 note : gag-like protein; zinc finger CCHC domain containing 16 product : zinc finger, CCHC domain containing 16 protein_id : NP_001028967.2

name	Lhfpl1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30387618 CCDS:CCDS30458.1 GeneID:237091 MGI:1891214
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] codon_start : 1 product : lipoma HMGIC fusion partner-like 1 protein_id : NP_848135.1

name	Amot (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:125346196 GeneID:27494 MGI:108440
definition	GO_component : GO:0005884 - actin filament [Evidence ISS]; GO:0031410 - cytoplasmic vesicle [Evidence ISS]; GO:0030139 - endocytic vesicle [Evidence ISS]; GO:0009897 - external side of plasma membrane [Evidence ISS]; GO:0030027 - lamellipodium [Evidence ISS] [Evidence IDA]; GO:0001726 - ruffle [Evidence ISS] GO_function : GO:0043532 - angiostatin binding [Evidence ISS]; GO:0004872 - receptor activity [Evidence ISS] GO_process : GO:0042074 - cell migration involved in gastrulation [Evidence IMP]; GO:0006935 - chemotaxis [Evidence IMP]; GO:0001701 - embryonic development (sensu Mammalia) [Evidence IMP]; GO:0010003 - gastrulation (sensu Mammalia) [Evidence IMP]; GO:0016525 - negative regulation of angiogenesis [Evidence ISS]; GO:0045766 - positive regulation of angiogenesis [Evidence ISS]; GO:0043536 - positive regulation of blood vessel endothelial cell migration [Evidence ISS]; GO:0040019 - positive regulation of embryonic development [Evidence IMP]; GO:0030334 - regulation of cell migration [Evidence ISS]; GO:0001570 - vasculogenesis [Evidence IMP] codon_start : 1 product : angiomotin protein_id : NP_695231.2

name	Htr2c (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31542977 CCDS:CCDS30459.1 GeneID:15560 MGI:96281
definition	GO_component : GO:0009897 - external side of plasma membrane [Evidence ISS]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0001584 - rhodopsin-like receptor activity [Evidence IEA]; GO:0004993 - serotonin receptor activity [Evidence ISS]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IEA]; GO:0048016 - inositol phosphate-mediated signaling [Evidence ISS]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 exception : mismatches in translation note : 5-HT2C receptor; snoRNA MBI-36 product : 5-hydroxytryptamine (serotonin) receptor 2C protein_id : NP_032338.2

name	LOC623591 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:623591
definition	number : 4 pseudo : _no_value

name	LOC623591 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:623591
definition	number : 3 pseudo : _no_value

name	LOC623591 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:623591
definition	number : 2 pseudo : _no_value

name	LOC623591 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:623591
definition	number : 1 pseudo : _no_value

name	LOC100039313 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039313
definition	number : 1 pseudo : _no_value

name	LOC100039313 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039313
definition	number : 2 pseudo : _no_value

name	LOC100039313 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039313
definition	number : 3 pseudo : _no_value

name	LOC623697 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:623697
definition	number : 1 pseudo : _no_value

name	LOC237096 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:237096
definition	number : 1 pseudo : _no_value

name	EG245663 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:245663
definition	number : 1 pseudo : _no_value

name	EG245663 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:245663
definition	number : 2 pseudo : _no_value

name	LOC100039558 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149272428 GeneID:100039558
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 293 ESTs, 27 Proteins product : similar to high-mobility group box 1 pseudo : _no_value transcript_id : XR_030948.1

name	EG666730 (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149272429 GeneID:666730 MGI:3647364
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 86 ESTs, 4 Proteins product : predicted gene, EG666730 pseudo : _no_value transcript_id : XR_001912.2

clone name	MSMg01-052M02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-134L12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-417C19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-370N03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-450F04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-524H01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-509I19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-297G24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-505L04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-324N09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-407G01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-132J17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-339A20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-423F09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-502A19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-052L20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-136D20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-412H07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-089P06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-477L18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-544J16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-485L15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-053C10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-133B17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-492B22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-053M16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-455F23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-276D15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-058H20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-082F03
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-081I18
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-542I02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-178E12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-445C09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-495P21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-532C15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-435E17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-124D10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-165H01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-075O04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-080G23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-358G05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-425I24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-506I09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-500H15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-464P15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-269J19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-351B05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-525L16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-088O04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-159E17
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-360F20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-532L19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-483A11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-423C12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-498L21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-482I05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-103J02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-388A24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-109F17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-144B22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-340F10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-123M07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-210H22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-034P11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-040B19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-166L10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-152M14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-202M01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-257L02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-262N08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-180D10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-039P12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-227B15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-203G10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-024A17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-283P02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-050P03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-083O03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-160O18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-173K06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-228E15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-118P20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-081E07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-079L05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-085N05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-237K16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-282P19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-238A02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-264G08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-144F16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-324P21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-046G10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-289J04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-105K01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-298C06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-289L16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-190O15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-209G08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-288L12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-307J15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-139H23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-318J12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-235H03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-265M05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-318B02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-333P15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-011L05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-100L12
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-085N05.b	B6Ng01-085N05.g
ACC	DH899388	DH899389
length	1,217	1,249
definition	DH899388\|Mus musculus domesticus DNA, BAC clone: B6Ng01-085N05, 5' end.	DH899389\|Mus musculus domesticus DNA, BAC clone: B6Ng01-085N05, 3' end.
singlet/doublet	singlet	---
BLAST hit	unique	no hit data
sequence	gaattctatgaaaataccatttgtgtaagcaaaaaaagcacaattctaca acaaagcacattttacaggaagccttaagccttaaaccattggaatgatt gcctggagataatgagaactagaaatagacagaaacaaataagcaaggat ataagcatcagtgttctaccacctgatagatatgaatagctcaagcctcc gcaacagaaattcaataatccaatagcaatgctcttaaaatagcaagaac tctgtttataagtatcctctccgtattctggaatataactatagttgtag tctctgttactcagatcaactgtgcaattttttccaaatatgtacataac aattttggcttgcatcttcaggtcctccctttaggtaaagatgtagttat tgccttaaactgacacatcttaatgtaacaagcagaaaacagcacattat cccaaccatagacttagactgtttgagttgcattaacaaaatctttacat cacctaatattaaaacaaaagaaggagttttattaatcataagtcttgaa actgggaagtataagtacataatactagaagtatgctcatgtgaatttct ctcaaatttattaataacaccctgtttctcatcttacatggtcaaagagt tgaaaaatatcccaaaagtttcttctgtggaagtagtgatccagttcata aaaaagtagtaagccttgtgactcaatcatttccttaaacataaacatct tcagaaaaacatattggagagggaatttcagtcttatggattaggaagaa aagagtagagacattcactctgtagtatagggtgttcatcagtttccttt caaacactaaactcacaaagatccatcttgtatttgtgtacggcaaccaa gtgttctaactcctaactatcttaacatcacatttgactcataataggac taatgaaaacatttttgtcactgcatgttaaatgtcttttgcattgaaat tatgaaacatttatagattctatgcaagtgtgttgatctttcattgcata gaaactaataaacaaatagcatattttgggcttagaattcatctattgga gaatatagtaatctttgaacaccaggttatgaacggaattcttaaaatcc tcatgataaattctccaatggttagaaaggactaaatttttgtaggtact ttgaaaattccaagaag	gaattctcctctgaagaaacagactgggaggaagaagcagctcattatga gaaaaaagggtaccagccaggtaaagtgctagctaatcagttaaggaagc caaaagcggctggcgaaggccagtttgctgattggcctcagggcagtcgg cttcaaggtccgccctatgcggagcccccgccctgcgtagtgcgtcagca atgcgcagagaggcaatgcgcagagagatgcgcagagaggcagtgcgcag agaggcagtgcgcagactcattcattcccagagaggaacaaaggaaaata caacaggcatttccagtctttgaaggagccgagggtgggcgtgtccacgc tccggtagaatacttacaaattaaagaactcgccgagtcggtccgtaaat acggaaccaatgctaattttaccttggtgcagttagacaggctcgccggc atggcactaactcctgctgactggcaaacggttgtaaaagccgctctccc tagtatgggcaaatatatggaatggagagcgctttggcacgaagctgcac aagcgcaggcccgagcaaacgcagctgctttgactccagagcagagagat tggacttttgacttgttaacgggtcagggagcttattctgctgatcaaac aaactaccattggggagcttatgcccagattttcttccacggctattagg gcctggaaggcgctctcccgagcaggtgaaaccactggtcaattaacaaa agttgtccagggacctcaggaatccttctcagattttgtggccagaatga cagaggcagcagagcgtatttttggagagtcagagcaagctgcgctctga tagaacagctaatctatgagcaagccacaaaggagtgccgagcggccata gccccaagaaagaacaaggcttacagactggctcagggtctgtcgagagc tgggggacctctcacaatgcaggcttagcggcgccatcttcaatctcaga ccgctccatgggcagaaataatcagagacatgtttttactggcgaaagct gggcattttaagaagatgcaagctccagaataacagggaggactcttcac tctttgtctctaggtggcaaaggtattctaggcttgaacatgtcgctctg taaggaattaaaggcaaaatagagttcccactgatgtctatcactgaagt gtcaaaaccggtcctccggggtccttcggtcctcagggctcccctagga
quality values	Open. Hide. 61 47 55 38 61 61 61 55 49 61 61 61 55 61 61 55 61 43 59 61 61 61 59 59 43 38 26 27 19 26 23 24 26 31 24 59 61 59 61 59 61 61 61 59 61 55 59 52 61 59 59 59 59 59 61 61 61 61 61 61 61 59 55 59 59 59 59 59 61 61 59 59 59 61 59 59 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 59 55 61 61 61 61 61 61 61 61 61 61 61 61 59 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 59 59 59 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 59 61 61 61 61 61 59 61 61 59 61 61 61 59 61 61 61 59 59 61 61 59 59 61 61 59 61 61 61 61 61 59 59 61 59 59 61 59 44 55 61 61 59 61 61 61 61 61 59 59 59 59 59 61 61 61 61 61 61 61 61 59 61 59 61 59 59 59 61 59 59 61 59 59 59 59 59 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 59 59 59 61 59 61 59 61 61 61 61 61 61 61 59 52 61 61 61 59 59 61 61 61 61 61 61 61 61 59 55 59 61 59 59 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 59 59 61 61 61 61 61 55 61 61 61 61 61 61 61 55 52 55 55 55 55 55 61 55 61 61 61 61 55 55 61 61 61 55 55 61 61 61 61 61 61 61 61 61 61 61 55 61 55 55 52 52 55 55 55 61 61 61 61 61 55 55 61 55 55 61 61 61 61 55 55 61 61 55 55 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 55 55 61 61 55 61 61 50 61 61 61 61 55 49 61 61 61 61 61 61 61 61 61 61 61 50 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 50 50 50 50 50 53 53 50 50 37 47 53 61 61 61 61 61 61 53 61 50 61 47 53 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 52 52 46 47 47 61 61 61 57 57 53 57 53 57 52 57 43 52 47 47 45 53 57 47 53 53 47 46 53 57 57 57 53 53 53 47 47 46 53 53 52 52 57 53 57 57 53 47 57 57 50 53 50 53 50 34 53 57 47 57 53 50 47 53 53 53 53 52 57 46 42 52 37 34 47 57 53 57 57 45 53 45 32 47 50 50 53 53 53 42 52 57 47 43 47 30 57 57 50 57 30 50 57 53 53 57 57 57 50 45 45 45 39 26 24 28 45 57 57 33 53 57 53 50 30 53 40 53 52 33 53 38 39 57 38 41 39 30 52 57 38 42 30 16 21 34 52 53 42 33 41 32 57 57 57 57 53 38 38 53 42 48 53 47 37 39 41 35 47 57 37 53 52 34 52 35 32 40 50 42 40 44 53 44 34 34 37 21 11 57 39 50 34 47 39 52 34 38 28 53 40 42 44 37 28 35 57 57 44 52 40 45 28 40 44 37 40 53 37 53 30 52 25 57 52 32 26 12 57 32 37 33 30 37 37 34 37 40 40 45 53 35 24 48 40 8 26 33 40 31 48 57 57 53 28 53 34 34 37 34 53 37 30 29 25 40 35 34 23 26 32 29 29 39 27 34 28 32 30 30 29 33 46 30 18 27 12 30 29 25 31 30 30 15 14 46 30 28 30 28 46 31 29 29 30 27 26 19 29 28 28 45 34 21 38 37 19 29 20 31 30 21 28 31 23 29 21 28 28 31 31 31 17 37 28 51 48 27 21 33 24 24 13 18 23 10 29 18 12 17 19 27 29 29 34 17 29 29 29 31 34 33 29 21 34 30 34 28 28 28 34 35 33 30 41 34 19 22 16 29 28 21 24 18 24 46 28 25 28 26 35 28 19 27 21 28 31 27 33 16 28 22 21 26 28 20 35 31 51 41 20 16 21 33 51 51 51 21 19 22 29 19 19 18 23 23 20 16 28 19 30 19 51 33 12 8 6 13 14 51 51 28 25 22 23 23 27 24 36 5 6 13 20 28 23 33 28 51 19 16 9 7 5 5 10 10 20 19 38 21 31 12 5 10 22 33 27 17 29 13 7 6 7 21 15 20 19 17 13 9 6 36 8 6 14 8 6 5 8 9 31 10 6 8 39 30 14 14 14 5 5 20 35 6 6 5 28 23 7 12 6 33 21 13 11 6 44 34 7 20 37 31 21 20 31 10 5 6 17 17 26 11 8 7 10 4 5 5 12 10 5 7 5 12 4 6 12 8 14 12 7 10 5 7 14 7 14 18 29 17 12 10 4 7 7 6 24 30 13 9 30 12 15 19 13 18 10 10 20 23 6 14 8 5 5 5 34 36 20 3 3 5 5 16 10 12 13 5 6 15 31 21 8 7 6 7 7 5 6 5 25 12 14 7 13 16 5 8 7 4 4 3 9 4 6 6 30 17 7 36 32 24 5 7 4 5 3 13 4 14 15 6 26 16 10 10 5 4 9 3 4 5 6 6 16 6 9 15 7	Open. Hide. 61 61 37 49 36 36 33 29 28 28 22 27 27 21 59 52 61 61 61 61 59 59 61 61 59 61 61 59 59 59 61 59 55 59 61 61 61 61 59 59 61 59 61 61 61 61 61 61 61 61 59 61 61 61 59 59 59 59 59 61 61 61 61 61 59 61 59 61 61 61 61 61 61 61 61 61 59 61 61 61 59 59 61 61 61 61 61 61 59 61 61 61 59 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 59 61 59 59 59 52 61 59 59 61 59 59 59 61 61 61 61 59 52 59 59 59 59 59 59 61 61 61 61 61 61 59 61 61 61 61 61 59 61 61 61 59 59 59 52 59 59 59 59 59 61 61 61 59 61 61 59 59 59 44 44 55 52 59 59 59 59 61 59 59 59 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 59 61 61 59 61 61 59 61 61 61 61 61 61 61 61 59 61 59 52 61 61 61 61 59 59 61 61 59 61 61 52 59 61 61 61 61 61 59 59 61 61 59 59 59 59 45 61 61 61 59 59 61 61 61 59 61 59 59 61 59 49 61 61 59 59 59 59 61 61 59 61 61 61 59 59 59 61 61 59 61 61 61 61 61 61 59 59 61 61 55 55 59 61 61 61 61 61 59 61 61 61 59 61 61 61 61 59 59 59 59 49 59 61 61 61 61 61 61 61 61 61 61 61 59 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 59 59 59 45 59 52 61 59 59 61 59 61 61 61 61 61 59 52 59 59 59 59 59 61 59 59 61 61 61 61 61 61 52 59 55 52 55 55 52 52 55 55 61 61 55 61 55 55 49 52 55 52 49 61 61 55 55 52 61 52 61 61 61 55 55 41 55 55 61 55 55 52 61 61 61 61 52 52 52 52 52 52 61 55 55 61 61 55 50 61 61 55 50 55 61 50 55 61 55 55 55 50 50 55 50 61 55 55 61 61 61 55 61 61 55 55 55 49 50 50 50 49 55 55 55 55 61 61 61 61 61 61 50 55 55 55 47 61 61 61 61 61 61 61 61 50 43 50 50 43 47 53 52 47 47 50 50 45 43 61 61 61 61 53 61 47 50 43 50 53 61 61 61 52 61 61 61 61 61 61 61 61 61 33 50 50 38 50 45 50 50 50 53 47 50 45 52 38 45 50 34 43 47 47 53 45 46 39 47 50 53 52 53 52 32 61 47 46 47 43 61 50 53 47 47 52 52 34 47 35 38 45 47 47 45 45 42 52 53 47 47 53 52 47 38 38 46 27 57 57 40 57 22 37 47 35 32 57 57 53 47 27 53 53 53 45 45 50 45 50 50 57 38 50 45 45 47 34 47 47 35 50 50 40 53 53 52 45 53 53 30 45 52 53 40 38 38 26 32 38 29 47 21 22 52 37 17 5 47 47 47 36 38 33 43 33 29 41 52 47 47 47 52 39 50 53 47 30 25 47 34 25 45 35 35 37 24 57 57 12 32 37 35 23 37 36 42 35 43 37 42 42 45 41 37 21 43 47 32 37 30 47 37 52 39 12 46 13 30 38 37 36 42 37 34 29 22 29 27 38 42 31 57 24 53 35 36 36 32 31 27 34 37 46 38 31 38 32 40 30 30 29 37 36 16 32 37 36 25 17 53 36 28 28 38 28 31 57 39 32 26 38 40 37 21 24 48 36 29 30 20 33 28 57 20 18 25 37 20 41 32 53 53 32 32 21 29 20 15 28 29 27 39 32 30 31 27 33 24 26 30 5 37 23 27 32 30 24 8 44 7 34 28 14 18 36 51 51 51 39 27 30 32 22 30 25 15 11 14 16 30 11 30 30 29 32 30 29 29 32 23 24 5 9 11 17 29 27 29 17 31 28 27 19 27 29 29 12 30 27 24 25 20 25 24 29 11 29 24 29 26 28 29 21 29 28 30 24 26 24 29 10 16 24 32 14 8 20 20 25 27 22 23 28 12 30 26 25 24 33 17 15 7 18 15 26 39 31 19 29 25 22 17 17 6 23 17 29 23 21 9 9 13 21 15 34 38 30 12 29 17 16 24 51 28 9 11 19 24 18 20 11 19 18 29 19 21 32 15 51 46 51 29 29 23 12 22 18 21 23 18 36 5 18 16 28 16 18 25 24 19 13 38 20 15 19 19 22 15 6 7 20 11 19 31 14 38 18 19 13 9 5 12 10 8 6 30 6 12 13 12 16 9 24 15 16 26 35 16 6 7 16 23 35 15 17 14 20 6 4 8 6 10 15 6 9 8 7 13 10 37 39 28 8 7 6 17 15 14 6 9 7 29 19 5 20 10 26 29 22 6 5 8 19 31 12 21 15 8 26 22 5 13 29 25 10 11 6 7 5 5 9 20 8 5 14 8 6 15 20 5 5 13 31 25 14 17 15 4 8 11 5 6 9 5 5 13 15 12 6 8 8 15 8 4 7 9 17 25 5 5 4 7 9 6 13 26 12 9 12 23 6 14 6 3 2 3 4 2 2 4 5 6 9 5 7 4 3 7 8 9 7 16 13 8 4 6 6 5 4 5 20 6 7 7 6 10 5 1 4 13 3 3 9 1 8 12 4 4 4 4 8 4 13 29 4 4 11 4 20 20 6 4 9 3 1 3 4 7 17 9 6 5 9 6 8 8 7 1 3 6 25 24 21 3 4 11 14 4 6 4 4 4 5 3 8 19 16 2 4 2 5 3 3 4 3 3 7 15 4 4 3 13 15 7 4 4 4 25 5 3 4 2 1 1 3

Alignment Information

BAC End 1

BAC End 2

seq1: chrX_142546194_142547406
seq2: B6Ng01-085N05.b_49_1265 (reverse)

seq1  CTTCTTTGGATTTATCAAAGTACCTACAAAAATTTAGTTCTGTCTTAACA  50
      |||| ||||| || |||||||||||||||||||||||| || ||| | ||
seq2  CTTC-TTGGAATTTTCAAAGTACCTACAAAAATTTAGTCCTTTCTAACCA  49

seq1  ATTGAG-ATTTATCATGAGATTTTTATGAATTTCGTTCATTACCTGTGTG  99
       | ||| ||||||||||||  ||||| ||||| ||||||| ||||| |||
seq2  TTGGAGAATTTATCATGAGGATTTTAAGAATTCCGTTCATAACCTG-GTG  98

seq1  -TCAAGGA-TACTATA-TCTC--ATAGATGAA-TCTAAGCCCAAATTATG  143
       |||| || ||||||| ||||  ||||||||| |||||||||||| ||||
seq2  TTCAAAGATTACTATATTCTCCAATAGATGAATTCTAAGCCCAAAATATG  148

seq1  CTTATTTGTTTA-TAGTTTCTATGCATTG-AAGATCAACACACTTGCATA  191
      | |||||||||| ||||||||||||| || ||||||||||||||||||||
seq2  C-TATTTGTTTATTAGTTTCTATGCAATGAAAGATCAACACACTTGCATA  197

seq1  GAATCTATTACATGTTTCATAATATTCAATGCAAAAGACATTTAACATGC  241
      ||||||| || |||||||||||| ||||||||||||||||||||||||||
seq2  GAATCTA-TAAATGTTTCATAAT-TTCAATGCAAAAGACATTTAACATGC  245

seq1  AGTGACAAAAATGTTTTCATTAGTCCTATTATGAGTCAAATGTGATGTTA  291
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGACAAAAATGTTTTCATTAGTCCTATTATGAGTCAAATGTGATGTTA  295

seq1  AGATAGTTAGGAGTTAGAACACTTGGTTGCCGTACACAAATACAAGATGG  341
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATAGTTAGGAGTTAGAACACTTGGTTGCCGTACACAAATACAAGATGG  345

seq1  ATCTTTGTGAGTTTAGTGTTTGAAAGGAAACTGATGAACACCCTATACTA  391
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTTGTGAGTTTAGTGTTTGAAAGGAAACTGATGAACACCCTATACTA  395

seq1  CAGAGTGAATGTCTCTACTCTTTTCTTCCTAATCCATAAGACTGAAATTC  441
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGTGAATGTCTCTACTCTTTTCTTCCTAATCCATAAGACTGAAATTC  445

seq1  CCTCTCCAATATGTTTTTCTGAAGATGTTTATGTTTAAGGAAATGATTGA  491
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTCCAATATGTTTTTCTGAAGATGTTTATGTTTAAGGAAATGATTGA  495

seq1  GTCACAAGGCTTACTACTTTTTTATGAACTGGATCACTACTTCCACAGAA  541
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCACAAGGCTTACTACTTTTTTATGAACTGGATCACTACTTCCACAGAA  545

seq1  GAAACTTTTGGGATATTTTTCAACTCTTTGACCATGTAAGATGAGAAACA  591
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACTTTTGGGATATTTTTCAACTCTTTGACCATGTAAGATGAGAAACA  595

seq1  GGGTGTTATTAATAAATTTGAGAGAAATTCACATGAGCATACTTCTAGTA  641
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTGTTATTAATAAATTTGAGAGAAATTCACATGAGCATACTTCTAGTA  645

seq1  TTATGTACTTATACTTCCCAGTTTCAAGACTTATGATTAATAAAACTCCT  691
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGTACTTATACTTCCCAGTTTCAAGACTTATGATTAATAAAACTCCT  695

seq1  TCTTTTGTTTTAATATTAGGTGATGTAAAGATTTTGTTAATGCAACTCAA  741
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTGTTTTAATATTAGGTGATGTAAAGATTTTGTTAATGCAACTCAA  745

seq1  ACAGTCTAAGTCTATGGTTGGGATAATGTGCTGTTTTCTGCTTGTTACAT  791
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTCTAAGTCTATGGTTGGGATAATGTGCTGTTTTCTGCTTGTTACAT  795

seq1  TAAGATGTGTCAGTTTAAGGCAATAACTACATCTTTACCTAAAGGGAGGA  841
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGATGTGTCAGTTTAAGGCAATAACTACATCTTTACCTAAAGGGAGGA  845

seq1  CCTGAAGATGCAAGCCAAAATTGTTATGTACATATTTGGAAAAAATTGCA  891
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGAAGATGCAAGCCAAAATTGTTATGTACATATTTGGAAAAAATTGCA  895

seq1  CAGTTGATCTGAGTAACAGAGACTACAACTATAGTTATATTCCAGAATAC  941
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTGATCTGAGTAACAGAGACTACAACTATAGTTATATTCCAGAATAC  945

seq1  GGAGAGGATACTTATAAACAGAGTTCTTGCTATTTTAAGAGCATTGCTAT  991
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAGGATACTTATAAACAGAGTTCTTGCTATTTTAAGAGCATTGCTAT  995

seq1  TGGATTATTGAATTTCTGTTGCGGAGGCTTGAGCTATTCATATCTATCAG  1041
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATTATTGAATTTCTGTTGCGGAGGCTTGAGCTATTCATATCTATCAG  1045

seq1  GTGGTAGAACACTGATGCTTATATCCTTGCTTATTTGTTTCTGTCTATTT  1091
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTAGAACACTGATGCTTATATCCTTGCTTATTTGTTTCTGTCTATTT  1095

seq1  CTAGTTCTCATTATCTCCAGGCAATCATTCCAATGGTTTAAGGCTTAAGG  1141
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGTTCTCATTATCTCCAGGCAATCATTCCAATGGTTTAAGGCTTAAGG  1145

seq1  CTTCCTGTAAAATGTGCTTTGTTGTAGAATTGTGCTTTTTTTGCTTACAC  1191
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCTGTAAAATGTGCTTTGTTGTAGAATTGTGCTTTTTTTGCTTACAC  1195

seq1  AAATGGTATTTTCATAGAATTC  1213
      ||||||||||||||||||||||
seq2  AAATGGTATTTTCATAGAATTC  1217

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information