MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-090I15
Chromosome	X (Build37)
Map Location	84,202,178 - 84,203,292
singlet/doublet	singlet
Overlap gene	Il1rapl1
Upstream gene	1700072E05Rik, Nr0b1, CN716893, LOC667841, LOC236427, EG667852, EG436212, Gm41, EG629374, EG637027
Downstream gene	LOC667876
Link	Open Mouse BAC browser

Click to get alignment info.

name	1700072E05Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:73495 MGI:1920745
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Nr0b1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:11614 MGI:1352460
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	CN716893 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:434903 MGI:3584456
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC667841 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:667841
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	LOC236427 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:236427
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 38 Proteins pseudo : _no_value

name	EG667852 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:667852 MGI:3644372
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 15 Proteins pseudo : _no_value

name	EG436212 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:436212 MGI:3647656
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 29 Proteins

name	Gm41 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:245502 MGI:2684887
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 33 Proteins

name	EG629374 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:629374 MGI:3648342
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 37 Proteins pseudo : _no_value

name	EG637027 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:637027 MGI:3643333
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 25 Proteins

name	Il1rapl1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:331461 MGI:2687319
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 Proteins

name	LOC667876 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:667876
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 Proteins pseudo : _no_value

name	1700072E05Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142367117 GeneID:73495 MGI:1920745
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 1700072E05 gene transcript_id : NM_028554.2

name	Nr0b1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802393 GeneID:11614 MGI:1352460
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : nuclear receptor subfamily 0, group B, member 1 transcript_id : NM_007430.3

name	CN716893 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:111378380 GeneID:434903 MGI:3584456
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : expressed sequence CN716893 transcript_id : NM_001033492.2

name	EG436212 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:51772204 GeneID:436212 MGI:3647656
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 29 Proteins product : predicted gene, EG436212 transcript_id : XM_488356.1

name	Gm41 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149271745 GeneID:245502 MGI:2684887
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 33 Proteins product : gene model 41, (NCBI) transcript_id : XM_111935.6

name	EG637027 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94407619 GeneID:637027 MGI:3643333
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 25 Proteins product : predicted gene, EG637027 transcript_id : XM_992998.1

name	Il1rapl1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94407621 GeneID:331461 MGI:2687319
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 Proteins product : interleukin 1 receptor accessory protein-like 1, transcript variant 1 transcript_id : XM_486726.4

name	1700072E05Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13386320 CCDS:CCDS30259.1 GeneID:73495 MGI:1920745
definition	codon_start : 1 exception : mismatches in translation product : hypothetical protein LOC73495 protein_id : NP_082830.1

name	Nr0b1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6671531 CCDS:CCDS30260.1 GeneID:11614 MGI:1352460
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA]; GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0004872 - receptor activity [Evidence IEA]; GO:0003707 - steroid hormone receptor activity [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA]; GO:0016564 - transcriptional repressor activity [Evidence IDA] GO_process : GO:0030154 - cell differentiation [Evidence IGI]; GO:0030238 - male sex determination [Evidence IGI] [Evidence IMP]; GO:0016481 - negative regulation of transcription [Evidence IDA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : adrenal hypoplasia congenita-like protein; adrenal hypoplasia, congenital homolog product : nuclear receptor subfamily 0, group B, member 1 protein_id : NP_031456.1

name	CN716893 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:111378381 CCDS:CCDS30261.1 GeneID:434903 MGI:3584456
definition	codon_start : 1 note : novel protein containing a MAGE family domain product : hypothetical protein LOC434903 protein_id : NP_001028664.2

name	EG436212 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:51772205 GeneID:436212 MGI:3647656
definition	codon_start : 1 product : similar to MAGE-B3 protein_id : XP_488356.1

name	Gm41 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149271746 GeneID:245502 MGI:2684887
definition	codon_start : 1 product : hypothetical protein protein_id : XP_111935.5

name	EG637027 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94407620 GeneID:637027 MGI:3643333
definition	codon_start : 1 product : similar to MAGE-B4 protein_id : XP_998092.1

name	Il1rapl1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94407622 GeneID:331461 MGI:2687319
definition	codon_start : 1 product : similar to interleukin 1 receptor accessory protein-like 1 isoform 1 protein_id : XP_486726.4

name	LOC667841 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667841
definition	number : 1 pseudo : _no_value

name	LOC667841 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667841
definition	number : 2 pseudo : _no_value

name	LOC667841 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667841
definition	number : 3 pseudo : _no_value

name	LOC236427 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:236427
definition	number : 2 pseudo : _no_value

name	LOC236427 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:236427
definition	number : 1 pseudo : _no_value

name	EG667852 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667852
definition	number : 1 pseudo : _no_value

name	EG667852 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667852
definition	number : 2 pseudo : _no_value

name	EG667852 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667852
definition	number : 3 pseudo : _no_value

name	EG629374 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:629374
definition	number : 2 pseudo : _no_value

name	EG629374 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:629374
definition	number : 1 pseudo : _no_value

name	LOC667876 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667876
definition	number : 1 pseudo : _no_value

clone name	MSMg01-538I21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-398D09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-518E23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-261A10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-485K13
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-338J16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-051I09
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-271L20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-458H16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-166I12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-119K06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-535F04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-280M06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-126B19
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-338P24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-185K15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-273O21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-319N03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-046O19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-279I22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-456E04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-065M18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-132O03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-155H06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-069A15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-376M09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-087A22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-347A03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-292G02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-260J22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-060I09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-290F19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-332M01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-148K08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-388A02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-444M15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-361H14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-203M13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-203N12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-409E01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-338F17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-513O07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-491F01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-263H06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-047O13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-541G17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-542B01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-132B21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-350A23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-213A03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-117F15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-401L04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-421C24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-149D24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-321P06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-110L17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-412H02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-064D01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-141G19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-170F08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-268D06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-051O12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-456P22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-260G19
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-481B02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-095L17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-385F11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-086A19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-267A13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-171K14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-322A06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-136J07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-227F09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-064J20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-145P21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-162M12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-210C02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-278I03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-299G13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-151I08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-178B11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-243P02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-234E08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-246A05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-174P20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-094J11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-181J06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-304F22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-255N17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-008P09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-098H15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-332H03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-262M07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-090I15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-220D05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-019C02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-277J24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-327H12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-303P05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-070D14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-037P09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-316K19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-316L13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-040K19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-320N12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-148F21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-309M03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-177F06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-140H17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-332H23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-066O21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-149O20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-154B09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-152O05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-150D17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-135J04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-153L04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-314H02
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-090I15.b	B6Ng01-090I15.g
ACC	DH902809	DH902810
length	1,231	1,107
definition	DH902809\|Mus musculus domesticus DNA, BAC clone: B6Ng01-090I15, 5' end.	DH902810\|Mus musculus domesticus DNA, BAC clone: B6Ng01-090I15, 3' end.
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	gaattcaaggcccatacctaaacatgataaaagcaatctacagcaaacca gtagccaacatcaaagtaaatggagagaagctggaagcaatcccactaaa atcagggactagacaaggctgcccactttctccctaccttttcaacatag tacttgaagtattagccagagcaattcgacaacaaaaggagatcaagggg atacaaattggaaaagaggaagtcaaaatatcactttttgcagatgatat gatagtatatataagtgaccctaaaaattctaccagagaactcctaaacc tgataaacagcttcggtgaagtagctggatataaaataaactcaaacaag tcaatggcctttctctatacaaagaataaacaggctgagaaagaaattag ggaaacaacacccttctcaatagtcacaaataatataaaatatcttggcg tgactctaactaaggaggtgaaagatctgtatgataaaaacttcaaatct ctgaagaaagaaattaaagaagatctcagaagatggaaagatctcccatg ctcatggattggcaggatcaacattgtaaaaatggctatcttgccaaaag caatctacagattcaatgcaatccccatcaaaattccaactcaattcttc aacgaattggaaggagcaatttgcaaatttgtctggaataacaaaaaacc taggatagcaaaaagtcttctcaaggataaaagaacttctggcggaatca ccatgccagacctaaagctttactacagagcaattgtgataaaaactgca tggtactggtatagagacagacaagtagaccaatggaatagaattgaaga tccagaaatgaacccacacacctatggtcacttgatcttcgacaagggag ctaaaaccatccagtggaagaaagacagcattttcaacaattggtgctgg cacactggttgtatcgtgtagaagattgcgatcgatcatacttatcttct gtactaagtcaatctagtgatcaggacttcacataaaacagagaaactga acttatagaggagaagtggggaaagcttggagaattgggccggaaaaatt ctgaccgacgcatgcttgtcttagatcggaattcgacaattggaactaat gattccaagtctgcagcaaagacgtctagacaagactcacgaatggaaga cttacaactcaaaccaatgggacataatact	gaattctttagaagccactgctgagatgattcatctccacaaaagaaaaa aatatactattcaagatgcatatgtggaggtatgttattgaaaatcagag atgatttttaaaataagcttcaaaaacccgaaaagaaggggggaggaaat ttggtaattagagttataggttattcaagtttggagattattttcattca ctatattattatgcagtgacaaacaaaagataggaatgattttttcctga tgtttccactgcctaggacattgaagcatggagggagcttagccaccact aggaattttctttgatggtaattatgtgacagaacaccaggggtttcact ttcagataaagatggacaatgaaggtcaatttttgacctgcctttttgga tattcagcactagcacaatttaattgggatcaggtaattgctcagaaggc tacactgagcacattatcatccctcagtgtcactcctgcacacctagtta tcctgatgttgtttgtcaaaaactgtcacaagggagtacatctcactaag aaaaataacctatgtgtcattgctcgaagcttcaagacaaaactctaaag gaatgagaaaaagtacttttgagcaaaatattttcatctctcagctgatt aaacttatatattggtaatattacagtttttacaaaatcaactatttaag gtggatcagtgatccttgtttctctagttcatggaaaatggtgcctaatg tctctcattgtttcttggcattgaaggatgtttgttttaaatatgttctg tatagtattaaggaattttgcaagttgtgatactttcttaaagatcatag tactttcaattttgtttcatagcaaaagaacctttttgtaatttttcatc attgaattagaaaccaaattatgacgtaatgtagaattttcataataaaa attgactatagatcttaatgaaagatcctagtccaccttgtaggggttgg tttgttcctggttggtttatttttcagagaaggtttctccttgtagccat ggccttctcaagacctccctcctaaaccagctgtactggacccaggaatc tacctgc
quality values	Open. Hide. 61 47 24 38 61 38 12 47 61 61 55 61 38 38 61 61 61 61 61 61 61 61 59 49 59 45 38 43 26 26 28 22 36 36 33 45 61 61 61 61 61 59 61 61 61 61 59 55 61 59 61 61 61 61 61 61 59 61 61 61 61 59 61 61 61 61 61 61 61 61 59 61 59 59 55 44 55 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 55 59 61 61 61 61 61 61 61 61 61 59 61 61 61 59 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 44 55 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 59 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 59 59 61 55 55 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 55 59 61 61 61 59 61 59 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 55 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 55 55 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 53 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 41 61 61 61 61 61 61 61 61 61 61 61 61 61 61 47 47 61 61 53 61 52 57 57 57 57 57 57 53 53 53 53 53 26 16 47 53 57 57 57 53 47 57 57 57 47 40 57 57 47 53 53 53 57 53 53 57 45 57 53 53 53 57 57 50 53 57 57 57 53 47 57 53 45 53 53 57 53 57 53 57 39 34 21 53 57 57 53 53 45 57 53 57 53 52 53 39 53 52 38 53 52 30 53 53 57 50 47 53 53 53 41 28 43 43 53 50 41 57 57 53 45 53 50 47 30 52 53 53 50 37 50 53 57 50 47 53 41 30 43 53 41 57 37 42 46 41 34 52 53 36 57 50 33 53 23 52 38 57 57 52 50 32 57 37 39 41 57 57 50 52 53 57 52 29 37 34 28 52 26 10 53 53 53 53 37 34 38 39 53 15 57 38 24 37 37 52 30 53 57 57 43 23 37 42 48 41 40 40 33 21 40 30 57 37 34 37 57 57 46 21 40 53 33 37 40 35 40 40 53 28 35 43 29 33 37 32 23 22 37 30 30 32 37 44 20 24 48 18 30 30 16 46 30 30 30 32 46 37 20 39 34 31 48 21 29 48 30 30 32 33 32 41 34 28 33 35 19 23 51 46 51 29 30 29 32 30 29 37 32 30 24 28 28 28 36 29 31 28 29 21 23 41 24 23 28 23 28 31 29 21 31 24 29 28 30 35 30 30 17 29 18 29 33 27 39 28 24 18 29 30 13 30 29 26 32 23 31 26 24 33 17 17 51 51 16 20 22 26 29 16 36 27 10 29 21 29 7 5 25 15 12 28 34 51 27 33 15 24 17 33 31 28 27 25 23 41 30 23 25 20 20 14 33 51 15 29 13 29 29 22 30 26 12 9 13 17 23 8 23 15 23 21 27 33 19 26 15 40 51 24 17 29 19 20 26 33 21 31 51 51 27 31 14 16 14 16 14 22 19 24 28 14 19 27 25 23 24 15 14 16 32 9 20 19 25 11 5 7 21 15 29 33 14 7 16 5 11 16 31 29 15 39 9 15 19 9 6 28 18 19 19 23 17 34 11 26 23 22 28 12 14 9 6 5 6 28 19 7 11 19 27 17 16 11 25 9 21 28 18 10 11 6 22 8 14 31 12 26 13 26 15 12 31 11 14 23 7 7 8 5 10 12 30 26 13 13 5 9 23 13 18 6 5 11 26 15 15 17 17 20 13 18 16 8 6 13 7 16 6 4 14 20 6 8 17 26 36 18 14 31 21 10 22 6 26 9 6 22 4 9 19 9 9 6 26 9 5 3 3 4 4 35 36 26 11 14 8 21 6 6 10 6 4 4 8 4 1 4 7 9 20 8 18 8 15 6 5 3 3 3 6 20 15 6 7 7 14 7 7 13 10 5 5 5 10 18 8 9 21 13 4 5 22 5 7 6 3 3 5 2 3 7 5 5 16 3 6 3 11 12 18 4 4 4 13 29 9 4 3 3 3 5 11 5 2 1 3 3 3 6 3 5 5 3 4 8 10 6 16 7 13 10 4 3 3 13 7 4 10 18 4 13 3 1 3 4 3 4 3 3 2 3 2 3 3 19 30 17 5 5 4 6 11 8 3 1 2 1	Open. Hide. 59 59 59 59 36 27 20 18 19 18 12 26 22 14 37 59 59 59 59 61 61 61 61 61 61 59 59 61 61 59 61 61 61 61 61 61 61 59 59 61 61 59 59 61 61 61 61 61 59 59 59 59 44 37 55 59 55 59 52 52 43 32 35 45 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 59 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 59 61 61 61 59 59 59 59 61 61 55 44 55 55 55 37 59 61 61 61 61 61 61 61 61 61 59 59 59 59 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 59 59 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 59 59 61 61 59 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 49 55 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 55 55 61 61 61 61 61 61 61 61 55 61 61 61 61 55 55 55 55 49 55 61 61 47 61 61 61 61 61 61 61 61 61 61 55 55 50 43 55 50 50 61 61 61 61 61 61 50 61 61 61 61 53 61 61 50 61 50 61 61 61 61 61 61 61 61 61 61 61 53 61 61 61 61 52 61 61 50 61 61 61 61 61 53 61 61 61 61 61 61 61 53 61 53 61 47 53 61 61 61 61 50 53 47 46 50 61 53 61 61 61 61 47 39 61 61 61 61 61 61 61 42 43 33 34 61 61 61 61 61 53 61 53 61 53 50 61 61 53 57 50 45 53 57 45 53 57 53 45 47 57 50 57 42 53 53 47 47 53 53 53 53 50 57 47 33 47 57 27 17 53 57 32 47 57 57 57 46 33 42 42 53 53 57 53 57 47 47 38 47 33 47 53 36 47 38 30 57 50 50 52 19 47 45 53 50 53 40 38 31 53 52 53 41 29 50 57 57 57 50 53 53 50 52 37 36 45 45 47 53 50 30 50 47 42 45 50 37 38 53 43 35 57 46 25 41 46 42 31 13 53 57 42 40 45 24 50 53 50 52 53 52 47 45 42 8 41 20 52 50 30 42 36 38 35 38 50 33 33 15 31 36 28 50 47 57 33 42 42 35 40 33 29 21 17 28 21 34 33 31 50 53 57 38 23 33 27 20 39 16 33 23 27 34 37 43 21 40 37 42 37 35 35 36 38 52 20 57 19 30 14 53 36 21 17 11 12 20 13 29 32 33 36 36 24 48 33 57 13 37 14 57 57 12 27 57 22 18 19 29 37 33 36 44 24 40 16 23 24 15 31 33 30 20 25 35 13 6 44 24 30 29 48 10 8 9 7 7 6 15 26 24 30 18 30 29 15 19 12 10 39 16 29 17 15 10 24 11 37 20 24 28 22 10 17 23 17 25 28 29 27 29 21 7 8 7 39 39 23 8 5 39 13 28 13 10 7 15 6 5 20 26 26 9 16 10 18 8 5 24 22 46 30 15 23 29 11 23 51 46 46 17 23 17 25 21 6 32 27 26 26 28 29 21 20 24 28 46 24 8 13 31 10 30 21 29 17 19 14 27 12 7 10 8 24 19 29 12 28 11 21 30 16 29 29 20 17 11 22 34 22 26 30 46 36 39 10 21 16 26 19 34 20 11 25 38 11 7 5 19 12 43 21 31 16 25 25 51 13 15 16 12 10 10 29 11 24 25 20 8 9 17 16 12 6 7 7 7 25 51 51 38 8 22 10 10 5 5 5 5 14 16 13 13 32 14 19 24 32 13 13 28 38 22 23 12 38 28 17 12 5 17 9 13 6 8 5 5 14 4 33 17 9 6 5 9 8 4 8 7 26 10 17 8 10 33 20 20 9 6 24 16 11 5 5 7 4 5 22 7 4 6 7 8 7 5 4 7 6 11 30 12 10 9 23 9 4 14 5 5 4 5 5 5 6 10 6 6 4 4 4 4 5 31 10 6 7 21 22 23 6 7 9

Alignment Information

BAC End 1

BAC End 2

seq1: chrX_84202178_84203292
seq2: B6Ng01-090I15.g_67_1173 (reverse)

seq1  GCAGGTAGATTCCTGAGTTCAAGTACAGCTTGGTTTAAGGAGTGAGTTTC  50
      ||||||||||||||| | || |||||||| |||||| ||||| ||| |  
seq2  GCAGGTAGATTCCTG-GGTCCAGTACAGC-TGGTTT-AGGAGGGAGGTCT  47

seq1  TAGGAAAGCCAATGCTACACAGAGAAACCCTATCTTGAAAAATAAAACAA  100
      |  ||| ||||  ||||||  |||||||| | || |||||||| |||| |
seq2  TGAGAAGGCCATGGCTACAAGGAGAAACCTTCTC-TGAAAAAT-AAACCA  95

seq1  ACAAGAAACAGACCAACCCCCTACTAGTGTGACTAAGATCTTTCATTAAG  150
      || || |||| ||||| ||||||| ||   ||||| ||||||||||||||
seq2  ACCAGGAACAAACCAA-CCCCTACAAGGTGGACTAGGATCTTTCATTAAG  144

seq1  ATCTTATAGTCAATTTTTATTATGAAAATTCTACATTACGTCATAATTTT  200
      ||| ||||||||||||||||||||||||||||||||||||||||||||| 
seq2  ATC-TATAGTCAATTTTTATTATGAAAATTCTACATTACGTCATAATTTG  193

seq1  GTTTCTAATTCAATGATGAAAAATTACAAAAATGGTTCTTTTGCTATGAA  250
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  GTTTCTAATTCAATGATGAAAAATTACAAAAA-GGTTCTTTTGCTATGAA  242

seq1  ACAAAATTGAAAGTACTATGATCCTTAAGAAAGTATCACAACTTGCAAAA  300
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  ACAAAATTGAAAGTACTATGATCTTTAAGAAAGTATCACAACTTGCAAAA  292

seq1  TTCCTTAATACTATACAGAACATATTTAAAACAAACATCCTTCAATGCCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTAATACTATACAGAACATATTTAAAACAAACATCCTTCAATGCCA  342

seq1  AGAAACAATGAGAGACATTAGGCACCATTTTCCATGAACTAGAGAAACAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAACAATGAGAGACATTAGGCACCATTTTCCATGAACTAGAGAAACAA  392

seq1  GGATCACTGATCCACCTTAAATAGTTGATTTTGTAAAAACTGTAATATTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATCACTGATCCACCTTAAATAGTTGATTTTGTAAAAACTGTAATATTA  442

seq1  CCAATATATAAGTTTAATCAGCTGAGAGATGAAAATATTTTGCTCAAAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATATATAAGTTTAATCAGCTGAGAGATGAAAATATTTTGCTCAAAAG  492

seq1  TACTTTTTCTCATTCCTTTAGAGTTTTGTCTTGAAGCTTCGAGCAATGAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTTTTCTCATTCCTTTAGAGTTTTGTCTTGAAGCTTCGAGCAATGAC  542

seq1  ACATAGGTTATTTTTCTTAGTGAGATGTACTCCCTTGTGACAGTTTTTGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAGGTTATTTTTCTTAGTGAGATGTACTCCCTTGTGACAGTTTTTGA  592

seq1  CAAACAACATCAGGATAACTAGGTGTGCAGGAGTGACACTGAGGGATGAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACAACATCAGGATAACTAGGTGTGCAGGAGTGACACTGAGGGATGAT  642

seq1  AATGTGCTCAGTGTAGCCTTCTGAGCAATTACCTGATCCCAATTAAATTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTGCTCAGTGTAGCCTTCTGAGCAATTACCTGATCCCAATTAAATTG  692

seq1  TGCTAGTGCTGAATATCCAAAAAGGCAGGTCAAAAATTGACCTTCATTGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTAGTGCTGAATATCCAAAAAGGCAGGTCAAAAATTGACCTTCATTGT  742

seq1  CCATCTTTATCTGAAAGTGAAACCCCTGGTGTTCTGTCACATAATTACCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCTTTATCTGAAAGTGAAACCCCTGGTGTTCTGTCACATAATTACCA  792

seq1  TCAAAGAAAATTCCTAGTGGTGGCTAAGCTCCCTCCATGCTTCAATGTCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAGAAAATTCCTAGTGGTGGCTAAGCTCCCTCCATGCTTCAATGTCC  842

seq1  TAGGCAGTGGAAACATCAGGAAAAAATCATTCCTATCTTTTGTTTGTCAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGCAGTGGAAACATCAGGAAAAAATCATTCCTATCTTTTGTTTGTCAC  892

seq1  TGCATAATAATATAGTGAATGAAAATAATCTCCAAACTTGAATAACCTAT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATAATAATATAGTGAATGAAAATAATCTCCAAACTTGAATAACCTAT  942

seq1  AACTCTAATTACCAAATTTCCTCCCCCCTTCTTTTCGGGTTTTTGAAGCT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCTAATTACCAAATTTCCTCCCCCCTTCTTTTCGGGTTTTTGAAGCT  992

seq1  TATTTTAAAAATCATCTCTGATTTTCAATAACATACCTCCACATATGCAT  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTAAAAATCATCTCTGATTTTCAATAACATACCTCCACATATGCAT  1042

seq1  CTTGAATAGTATATTTTTTTCTTTTGTGGAGATGAATCATCTCAGCAGTG  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGAATAGTATATTTTTTTCTTTTGTGGAGATGAATCATCTCAGCAGTG  1092

seq1  GCTTCTAAAGAATTC  1115
      |||||||||||||||
seq2  GCTTCTAAAGAATTC  1107

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information