BAC Information

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BAC

Clone NameB6Ng01-091B17
ChromosomeX (Build37)
Map Location 112,960,109 - 113,103,516
singlet/doubletdoublet
Overlap genenone
Upstream geneEG237009, 4930524E20Rik, LOC237008, EG664969, EG546362, LOC100039255, LOC623913, LOC546363
Downstream geneLOC100039277, Cpxcr1, EG624153, LOC100039300, EG665045
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-091B17.bB6Ng01-091B17.g
ACCDH903227DH903228
length1,113449
definitionDH903227|Mus musculus domesticus DNA, BAC clone: B6Ng01-091B17, 5' end.DH903228|Mus musculus domesticus DNA, BAC clone: B6Ng01-091B17, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(113,102,402 - 113,103,516)(112,960,109 - 112,960,871)
sequence
gaattcacaactgaggaatcttgaatggttgagaagcacctaaagaaatg
ttcaaagtccttagtgttcagagaaatacaaatcaaaacaacactgagat
tccaacttacaccagtcagaatggctaagatcaaaacttcaggtgacaac
acatgttggagaggatgtgaagaaataggaacattcctccattgctggtg
ggattgcaaactagtacaaccactctggaagtcaatctggaggttcctca
gaaaattagaaataaatctacttgaaaacccagctatatcacttttggga
atatgctgaaaagagaccccaccatgccagaggggcacatcttccactat
gtttatagctgacatatttgtgatagccagaaactggaaacaccctagat
gtcccaagacagaaaaatgaatacagaaaatgtggttgatttacacttta
atcatatttaaattaagtcacaacttgaacagtttcatataaccatgcca
tattgatattttaaattatcttatacttcagggattcatattaatctgtg
tttgaatttgtctttaagttttaatcagttctatttttcagtctatattc
ctattttgtatctgagacttttcctgtcttgattattttcatgtatttct
ttttattggatcagttgaaatcgcattgaagttcaaagaattggcacatt
attttacctctaaatctatttgtttttattatagtaaaatattttttaaa
aaactttgcatgattctaaattattaattgaggccacaagtagtcctttt
gtagtatgtatagacaggacatctgtataaaccatgcagagcatacattc
ttactcaatattttaccctagtagtgaatttcttgacagaaaaagataaa
gcttcaggaaaaaacatcttaaatgtgagtttcaattttgatttgtgttt
aaatattcccactagttaaaattctttctatatatgtttagatacttaga
tatattttgtattctcataaaaataaattatgtgagtgtgtgtgagagag
aaaaggaagaaagagaaaaggtatgaatttgcttcattgtgaattgaatt
caaaaatgaataa
caagaagtgctttcagacaggagcctcttatcagtgtctcctgagagact
gacaaatgcagaggcatatgctcccagccaaacattggactgagcacagg
gtcccaaattgagttgttcaagaaaggattgaaggagatgaagggctttg
taactccatagaaagaacaacaatatcaaccaaccagaccccagacgatg
gcattttctggcatcaattcgaggagcagcccttggccctgtgatggcta
gataggggaatgtcagggcagtgagataggagttggttggtaggttgggg
agcacactcacagaagctgggtgaggagtaatggtatatgaggttggtgg
aagggaaacacagaaaggtgataacatttgaattgtaaatacataaaata
tcaaaaaaatgagaatggggacagtaaactattgcagtaaatcttcaac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_113102402_113103516
seq2: B6Ng01-091B17.b_45_1157 (reverse)

seq1  TTATTCATTTTTTGAATCATGTCACAATTAAAGCAAAATCATTACCTTTT  50
      ||||||||||||  | |||  |||||| | ||||||| ||| ||||||||
seq2  TTATTCATTTTTGAATTCAATTCACAA-TGAAGCAAATTCA-TACCTTTT  48

seq1  CTCTGTCTTCCTTTTCTCTCTCACACACACTCACATAATTTATTTTTATG  100
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTTCTTCCTTTTCTCTCTCACACACACTCACATAATTTATTTTTATG  98

seq1  AGAATACAAAATATATCTAAGTATCTAAACATATATAGAAAGAATTTTAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATACAAAATATATCTAAGTATCTAAACATATATAGAAAGAATTTTAA  148

seq1  CTAGTGGGAATATTTAAACACAAATCAAAATTGAAACTCACATTTAAGAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGTGGGAATATTTAAACACAAATCAAAATTGAAACTCACATTTAAGAT  198

seq1  GTTTTTTCCTGAAGCTTTATCTTTTTCTGTCAAGAAATTCACTACTAGGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTTTCCTGAAGCTTTATCTTTTTCTGTCAAGAAATTCACTACTAGGG  248

seq1  TAAAATATTGAGTAAGAATGTATGCTCTGCATGGTTTATACAGATGTCCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATATTGAGTAAGAATGTATGCTCTGCATGGTTTATACAGATGTCCT  298

seq1  GTCTATACATACTACAAAAGGACTACTTGTGGCCTCAATTAATAATTTAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTATACATACTACAAAAGGACTACTTGTGGCCTCAATTAATAATTTAG  348

seq1  AATCATGCAAAGTTTTTTAAAAAATATTTTACTATAATAAAAACAAATAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCATGCAAAGTTTTTTAAAAAATATTTTACTATAATAAAAACAAATAG  398

seq1  ATTTAGAGGTAAAATAATGTGCCAATTCTTTGAACTTCAATGCGATTTCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAGAGGTAAAATAATGTGCCAATTCTTTGAACTTCAATGCGATTTCA  448

seq1  ACTGATCCAATAAAAAGAAATACATGAAAATAATCAAGACAGGAAAAGTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGATCCAATAAAAAGAAATACATGAAAATAATCAAGACAGGAAAAGTC  498

seq1  TCAGATACAAAATAGGAATATAGACTGAAAAATAGAACTGATTAAAACTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGATACAAAATAGGAATATAGACTGAAAAATAGAACTGATTAAAACTT  548

seq1  AAAGACAAATTCAAACACAGATTAATATGAATCCCTGAAGTATAAGATAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGACAAATTCAAACACAGATTAATATGAATCCCTGAAGTATAAGATAA  598

seq1  TTTAAAATATCAATATGGCATGGTTATATGAAACTGTTCAAGTTGTGACT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAAATATCAATATGGCATGGTTATATGAAACTGTTCAAGTTGTGACT  648

seq1  TAATTTAAATATGATTAAAGTGTAAATCAACCACATTTTCTGTATTCATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTTAAATATGATTAAAGTGTAAATCAACCACATTTTCTGTATTCATT  698

seq1  TTTCTGTCTTGGGACATCTAGGGTGTTTCCAGTTTCTGGCTATCACAAAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTGTCTTGGGACATCTAGGGTGTTTCCAGTTTCTGGCTATCACAAAT  748

seq1  ATGTCAGCTATAAACATAGTGGAAGATGTGCCCCTCTGGCATGGTGGGGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCAGCTATAAACATAGTGGAAGATGTGCCCCTCTGGCATGGTGGGGT  798

seq1  CTCTTTTCAGCATATTCCCAAAAGTGATATAGCTGGGTTTTCAAGTAGAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTTTCAGCATATTCCCAAAAGTGATATAGCTGGGTTTTCAAGTAGAT  848

seq1  TTATTTCTAATTTTCTGAGGAACCTCCAGATTGACTTCCAGAGTGGTTGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTCTAATTTTCTGAGGAACCTCCAGATTGACTTCCAGAGTGGTTGT  898

seq1  ACTAGTTTGCAATCCCACCAGCAATGGAGGAATGTTCCTATTTCTTCACA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAGTTTGCAATCCCACCAGCAATGGAGGAATGTTCCTATTTCTTCACA  948

seq1  TCCTCTCCAACATGTGTTGTCACCTGAAGTTTTGATCTTAGCCATTCTGA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCTCCAACATGTGTTGTCACCTGAAGTTTTGATCTTAGCCATTCTGA  998

seq1  CTGGTGTAAGTTGGAATCTCAGTGTTGTTTTGATTTGTATTTCTCTGAAC  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTGTAAGTTGGAATCTCAGTGTTGTTTTGATTTGTATTTCTCTGAAC  1048

seq1  ACTAAGGACTTTGAACATTTCTTTAGGTGCTTCTCAACCATTCAAGATTC  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAAGGACTTTGAACATTTCTTTAGGTGCTTCTCAACCATTCAAGATTC  1098

seq1  CTCAGTTGTGAATTC  1115
      |||||||||||||||
seq2  CTCAGTTGTGAATTC  1113

seq1: chrX_112960109_112960871
seq2: B6Ng01-091B17.g_67_521

seq1  GAATTCCAAGAAGTGCTTTCAGACAGGAGCCTCTTATCAGTGTCTCCTGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAAGAAGTGCTTTCAGACAGGAGCCTCTTATCAGTGTCTCCTGA  50

seq1  GAGACTGACAAATGCAGAGGCATATGCTCCCAGCCAAACATTGGACTGAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACTGACAAATGCAGAGGCATATGCTCCCAGCCAAACATTGGACTGAG  100

seq1  CACAGGGTCCCAAATTGAGTTGTTCAAGAAAGGATTGAAGGAGATGAAGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGGGTCCCAAATTGAGTTGTTCAAGAAAGGATTGAAGGAGATGAAGG  150

seq1  GCTTTGTAACTCCATAGAAAGAACAACAATATCAACCAACCAGACCCCAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTGTAACTCCATAGAAAGAACAACAATATCAACCAACCAGACCCCAG  200

seq1  ACGATGGCATTTTCTGGCATCAATTCGAGGAGCAGCCCTTGGCCCTGTGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGATGGCATTTTCTGGCATCAATTCGAGGAGCAGCCCTTGGCCCTGTGA  250

seq1  TGGCTAGATAGGGGAATGTCAGGGCAGTGAGATAGGAGTTGGTTGGTAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTAGATAGGGGAATGTCAGGGCAGTGAGATAGGAGTTGGTTGGTAGG  300

seq1  TTGGGGAGCACACTCACAGAAGCTGGGTGAGGAGTAATGGTATATGAGGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGGAGCACACTCACAGAAGCTGGGTGAGGAGTAATGGTATATGAGGT  350

seq1  TGGTGGAAGGGAAACACAGAAAGGTGATAACATTTGAAATGTAAATACAT  400
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  TGGTGGAAGGGAAACACAGAAAGGTGATAACATTTGAATTGTAAATACAT  400

seq1  AAAATATCAAAAAAATGAGAATGGGGACAGTAAACTATTGCAGTAAATCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATATCAAAAAAATGAGAATGGGGACAGTAAACTATTGCAGTAAATCT  450

seq1  CCAACTTAAATATGGCCCGGCAATGAAAACACAATCCAATTAATATGAAT  500
       ||||                                             
seq2  TCAAC---------------------------------------------  455

seq1  GCATGCTGTGTGCCTAGATTGGGCAGATCTACCTTAAACTACCATCTTCC  550
                                                        
seq2  --------------------------------------------------  455

seq1  ACATTTATGATACTCCTTAGAATGTGTGGTTTCTCTAGGCCATGTGCTTC  600
                                                        
seq2  --------------------------------------------------  455

seq1  TGCTCAGCTTTTCTTCTTCCTCCTCCTCTGTGTCATCAGCCTCTTCCATT  650
                                                        
seq2  --------------------------------------------------  455

seq1  TTCTCCATCTTTTCTCTCTCTACCTTCCACTCATCCTTTCTTTTATCTGC  700
                                                        
seq2  --------------------------------------------------  455

seq1  TCAATCATCAGCTTTCCTTAATTTTACAAATTAAGGTGGGAAGCAGCTTT  750
                                                        
seq2  --------------------------------------------------  455

seq1  ATAGGAAATCAAC  763
                   
seq2  -------------  455