BAC Information

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BAC

Clone NameB6Ng01-092G20
ChromosomeX (Build37)
Map Location 32,037,763 - 32,198,573
singlet/doubletdoublet
Overlap geneLOC100039460, LOC100040781
Upstream geneLOC100039328, LOC100040552, LOC100040575, LOC100040585, LOC100039362, LOC100040606, LOC100040612, LOC673784, LOC100040650, LOC100040662, LOC100039419, LOC100039429, LOC100040698, LOC630028, LOC100040722, LOC100040732, LOC100040743, LOC385298
Downstream geneLOC100039515, LOC100039522, LOC100039473, LOC100039550, LOC100039557, LOC100039573, EG665074, LOC100039585, LOC100039497
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-092G20.bB6Ng01-092G20.g
ACCDH904192DH904193
length9531,133
definitionDH904192|Mus musculus domesticus DNA, BAC clone: B6Ng01-092G20, 5' end.DH904193|Mus musculus domesticus DNA, BAC clone: B6Ng01-092G20, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(32,197,630 - 32,198,573)(32,037,763 - 32,038,912)
sequence
gaattctttcttatttcaaccctgacaaagtatcattcagcagaaagttt
ttcagttttcatgagtatgtggactttctgttgttttggttgttattgac
atctagccttatcctgatgttatctgatagaatgcatgtgagtattccca
ttttcttgtatctgttgatgcttttgttttatgaccaattatattatcag
ttttggggaatgttctatgaggaactcagcagaatatatattctcttgtt
ttggcatgaaatgttctattgatatctattaaatccatttgggtcaagac
ttctgttagttttactgtgtctctgttattttctttttctttcttttttt
tttttttttttttttttttttttagggatgacctgtttctgcaccttagt
ggtctcggctagaaaacttgaagacaggccagcccacagatataggcatt
tctaattttatgtacttgcaacttgatcatacagcatgcaagaatgtgtt
agagccaatgagatttcaaaaaaataattgaaaacataaacaaaggcaat
taagtacacaactgtgttcagaatttattattgacgggtacttgagatca
ggagttacaaattcatttgatgaacttttaccttggggttttttttatac
tactcaaatcaggcctatcaatttgtattcaagtgatgttgttttgcatg
tgtgttgacactcagcatccccctctacagagacacagtggctgccttac
tccagaaggatctgtgtctaatttagttcatctttctttctttctttttt
tccattttttattaggtatttagctcatttacatttccaatgctatacca
aaagtcccccatacccacccacccccacttccctaccacccactcccctt
tagggcctggggtccactgtatcggggcatataaagtttgcaggcaaatg
ggc
gaattcattgctaaccctactgtccaaagcacatgacaacagtaaagatc
ctatcttgcccctcccaccgtatgattaatgtcattaataaattttctgc
tgtctcaagcaaattcattggagggtaaataccttaacattcagctggat
gttggtggctgatgcctttaatcccagaactcaggaggcagatccaggca
tatctctgagtttgaggtcagcctggtctacatagtatgtctcaggacag
ccagggatacagggagagatcctgtcttggaaaacaaataaaataataca
aatataaatataaacaaaacaatgcaacattcttaattggaaagtatttg
gctatagatgctgaatgaaagccttttctaaagctaaactatatgctgtc
agcaattggtaatttatctccacaatacaataataagaaatactgaaact
atgtatatttccgtctgataagacataagtcattaatataccatacagaa
tcaaaaataattgtcagggtattccttctaaataaaataataataataat
aaaaataattccttctaaaggctcggaataatttgtcctgtgtgtccttt
gattccactttttttttcttcaacacaaccaaagtacttttcacgaagaa
aatagttataaattggagcattggaccctttgtttaatgccttaaatacc
ccttgagtaggatgggctgttttgtgaaatacttgtgatcattctattaa
gcatagatgcctaaaatctatagctaccaagctcaatggaggcaaaggct
actggagacatgtgggtcttgtgtctcatttggagtgaggatcaacatga
tgttagttatacacacattaaattatatttccacatcaggagtgcatcct
acatgtactaagaattgttgcctgcattttctggcccatgaggaaagtgt
ttgtagaacactaattctttgatttcttccccttccatccctttttggtg
tttctacaaagagaaaacagatctcagaaaggaaaaatcaaatattttct
cttatgcttaatgaagtactgtagagaataaagcttttattctagtgctt
aaaatctataaacgaaagctgaaaccttgaagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_32197630_32198573
seq2: B6Ng01-092G20.b_43_995 (reverse)

seq1  GCCCATTGGACTTGCAAACTTTATATGCCCAAGTACAGGGGAACGCCAGG  50
      ||||||| | | ||||||||||||||||||   ||||| || || |||||
seq2  GCCCATTTG-CCTGCAAACTTTATATGCCCCGATACAGTGG-ACCCCAGG  48

seq1  GCCAAAAAGGGGGAGTGGGTGGATAGGGGAGTGGGGGTGGGTGGGTATGG  100
       || |||  ||||||||||||| ||||| |||||||||||||||||||||
seq2  CCCTAAA--GGGGAGTGGGTGG-TAGGGAAGTGGGGGTGGGTGGGTATGG  95

seq1  GGGACTTTTGGTATAGCATTGGAAATGTAAATGAGCTAAATACCTAATAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGACTTTTGGTATAGCATTGGAAATGTAAATGAGCTAAATACCTAATAA  145

seq1  AATATGGAAAAAAAAGAAAGAAAGAAAGATGAACTAAATAAGACACAGAT  200
      || |||| ||||||||||||||||||||||||||||||| ||||||||||
seq2  AAAATGG-AAAAAAAGAAAGAAAGAAAGATGAACTAAATTAGACACAGAT  194

seq1  CCTTCTGGAGTAAGGCAGCCACTGTGTCTCTGTAGAGGGGGATGCTGAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCTGGAGTAAGGCAGCCACTGTGTCTCTGTAGAGGGGGATGCTGAGT  244

seq1  GTCAACACACATGCAAAACAACATCACTTGAATACAAATTGATAGGCCTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAACACACATGCAAAACAACATCACTTGAATACAAATTGATAGGCCTG  294

seq1  ATTTGAGTAGTATAAAAAAAA-CCCAAGGTAAAAGTTCATCAAATGAATT  349
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  ATTTGAGTAGTATAAAAAAAACCCCAAGGTAAAAGTTCATCAAATGAATT  344

seq1  TGTAACTCCTGATCTCAAGTACCCGTCAATAATAATTTTTGAACACAGTT  399
      ||||||||||||||||||||||||||||||||||| || |||||||||||
seq2  TGTAACTCCTGATCTCAAGTACCCGTCAATAATAAATTCTGAACACAGTT  394

seq1  GTGTACTTAATTGCCTTTGTTTATGTTTTCAATTATATTTTTGAAATCTC  449
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  GTGTACTTAATTGCCTTTGTTTATGTTTTCAATTATTTTTTTGAAATCTC  444

seq1  ATTGGCTCTAACACATTCTTGCATGCTGTATGATCAAGTTGCAATTACAT  499
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  ATTGGCTCTAACACATTCTTGCATGCTGTATGATCAAGTTGCAAGTACAT  494

seq1  AAAATTAGAAATTCCTATATCTGTGGGCTGGACTGTCTTCAAGTCTTCTA  549
      |||||||||||| |||||||||||||||||| |||||||||||| |||||
seq2  AAAATTAGAAATGCCTATATCTGTGGGCTGGCCTGTCTTCAAGTTTTCTA  544

seq1  GCTGAGACCACTAAGGTGCAGAAACAGGTCATCCCTAAAAAAAAAAAAAA  599
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCGAGACCACTAAGGTGCAGAAACAGGTCATCCCTAAAAAAAAAAAAAA  594

seq1  AAAAAAA--------------AAAAAGAAAATAACAGAGACACAGTAAAA  635
      |||||||              |||||||||||||||||||||||||||||
seq2  AAAAAAAAAAAAAAAAGAAAGAAAAAGAAAATAACAGAGACACAGTAAAA  644

seq1  CTTACAGAAGTCTTGACCCAAATGGATTTAATAGATATTAATAGAACATT  685
      || ||||||||||||||||||||||||||||||||||| |||||||||||
seq2  CTAACAGAAGTCTTGACCCAAATGGATTTAATAGATATCAATAGAACATT  694

seq1  TCATGCCAAAACAAGAGAATATATATTCTTCTGAGTTCCTCATGGAACAT  735
      ||||||||||||||||||||||||||||| ||||||||||||| ||||||
seq2  TCATGCCAAAACAAGAGAATATATATTCTGCTGAGTTCCTCATAGAACAT  744

seq1  TTCCCAAAACTGATAATATAATTGGTCATAAAACAGAAGCATCAACAGAT  785
      | ||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  TCCCCAAAACTGATAATATAATTGGTCATAAAACAAAAGCATCAACAGAT  794

seq1  ACAAGAGAATGGGAATACTCACATGCATTCTATCAGATAATATTAGGATA  835
      |||||| ||||||||||||||||||||||||||||||||| || ||||||
seq2  ACAAGAAAATGGGAATACTCACATGCATTCTATCAGATAACATCAGGATA  844

seq1  AGGCTAGATGTCAATAACAACCAAAACAACAAAAAGTCCACATACTATTG  885
      ||||||||||||||||||||||||||||||| ||||||||||||||  ||
seq2  AGGCTAGATGTCAATAACAACCAAAACAACAGAAAGTCCACATACTCATG  894

seq1  AAAACTGAAAAACTTTCTGCTGAATGATACTTGGTCAGGGTTGAAATAAG  935
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  AAAACTGAAAAACTTTCTGCTGAATGATACTTTGTCAGGGTTGAAATAAG  944

seq1  AAAGAATTC  944
      |||||||||
seq2  AAAGAATTC  953

seq1: chrX_32037763_32038912
seq2: B6Ng01-092G20.g_68_1200

seq1  GAATTCATTGCTAACCCTACTGTCCAAAGCACATGACAACAGTAAAGATC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTGCTAACCCTACTGTCCAAAGCACATGACAACAGTAAAGATC  50

seq1  CTATCTTGCCCCTCCCACCGTATGATTAATGTCATTAATAAATTTTCTGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCTTGCCCCTCCCACCGTATGATTAATGTCATTAATAAATTTTCTGC  100

seq1  TGTCTCAAGCAAATTCATTGGAGGGTAAATACCTTAACATTCAGCTGGAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTCAAGCAAATTCATTGGAGGGTAAATACCTTAACATTCAGCTGGAT  150

seq1  GTTGGTGGCTGATGCCTTTAATCCCAGAACTCAGGAGGCAGATCCAGGCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGGTGGCTGATGCCTTTAATCCCAGAACTCAGGAGGCAGATCCAGGCA  200

seq1  TATCTCTGAGTTTGAGGTCAGCCTGGTCTACATAGTATGTCTCAGGACAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTCTGAGTTTGAGGTCAGCCTGGTCTACATAGTATGTCTCAGGACAG  250

seq1  CCAGGGATACAGGGAGAGATCCTGTCTTGGAAAACAAATAAAATAATACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGGATACAGGGAGAGATCCTGTCTTGGAAAACAAATAAAATAATACA  300

seq1  AATATAAATATAAACAAAACAATGCAACATTCTTAACTGGAAAGTATTTG  350
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  AATATAAATATAAACAAAACAATGCAACATTCTTAATTGGAAAGTATTTG  350

seq1  GCTATAGATGCTGAATGAAAGCCTTTTCTAAAGCTAAACTATATGCTGTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTATAGATGCTGAATGAAAGCCTTTTCTAAAGCTAAACTATATGCTGTC  400

seq1  AGCAATTGGTAATTTATCTCCACAATACAATAATAAGAAATACTGAAACT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAATTGGTAATTTATCTCCACAATACAATAATAAGAAATACTGAAACT  450

seq1  ATGTATATTTCCGTCTGATAACACATAAGTCATTAATATACCATACAGAA  500
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  ATGTATATTTCCGTCTGATAAGACATAAGTCATTAATATACCATACAGAA  500

seq1  TCAAAAATAATTGTCAGGGTATTCCTTCTAAATAAAATAATAATAATAAT  550
      |||||||||||||||||||||||||||||||||||   ||||||||||||
seq2  TCAAAAATAATTGTCAGGGTATTCCTTCTAAATAA---AATAATAATAAT  547

seq1  AATAAAAATAATTCCTTCTAAAGGCTCGGAATAATTTGTCCTGTGTGTCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAAAATAATTCCTTCTAAAGGCTCGGAATAATTTGTCCTGTGTGTCC  597

seq1  TTTGATTCCACTTTTTTTTTTCTTCAACACAACCAAAGTACTTTTCACGA  650
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  TTTGATTCCAC-TTTTTTTTTCTTCAACACAACCAAAGTACTTTTCACGA  646

seq1  AGAAAATAGTTATAAATTGGAGCATTGGACCCTTTGTTTAATGTCTTAAA  700
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  AGAAAATAGTTATAAATTGGAGCATTGGACCCTTTGTTTAATGCCTTAAA  696

seq1  TACCCCTTGAGTAGGATGGGCTGTTTTGTGAAATACTTGTGATCATTCTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCCCTTGAGTAGGATGGGCTGTTTTGTGAAATACTTGTGATCATTCTA  746

seq1  TTAAGCATAGATGCCTAAAATCTCTAGCTACCAAGCTCAATGGAGGCAAA  800
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  TTAAGCATAGATGCCTAAAATCTATAGCTACCAAGCTCAATGGAGGCAAA  796

seq1  GGCTACTGGAGACATGTGGGTCTTGTGTCTCATTTGGAGTGAGGATCAAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTACTGGAGACATGTGGGTCTTGTGTCTCATTTGGAGTGAGGATCAAC  846

seq1  ATGATGTTAGTTATACACACATTAAATTATATTTCCACATCA-GAGTGCA  899
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  ATGATGTTAGTTATACACACATTAAATTATATTTCCACATCAGGAGTGCA  896

seq1  TCCTACATGTACTAAGAATTGTTGCCTGCATTTCTTGGCCCATGAGGAAA  949
      |||||||||||||||||||||||||||||||||  |||||||||||||||
seq2  TCCTACATGTACTAAGAATTGTTGCCTGCATTTTCTGGCCCATGAGGAAA  946

seq1  GTGTTTGTAGAACACTAATTCTTTGATTTCTTCCCCTTCCCATCCCTTTT  999
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  GTGTTTGTAGAACACTAATTCTTTGATTTCTTCCCCTT-CCATCCCTTTT  995

seq1  TGGTTGTTTCTACAAAGAGAAAACAGAATCTCAGGAAAAGGAAAAATCAA  1049
      ||| |||||||||||||||||||||| |||||||  ||||||||||||||
seq2  TGG-TGTTTCTACAAAGAGAAAACAG-ATCTCAG--AAAGGAAAAATCAA  1041

seq1  ATACTTTCTCTAATGCTTAATGAAGGTACTGGTAGGAAGAATAAAGGCTT  1099
      ||| ||||||| |||||||||||| ||||| ||||  |||||||| ||||
seq2  ATATTTTCTCTTATGCTTAATGAA-GTACT-GTAG--AGAATAAA-GCTT  1086

seq1  TTATTTTCCTAAGTGCTATAAAATCTAT-AACAGAAGCTGAAACCTTGAA  1148
      ||||| |    |||||| |||||||||| |||  ||||||||||||||||
seq2  TTATTCT----AGTGCT-TAAAATCTATAAACGAAAGCTGAAACCTTGAA  1131

seq1  GG  1150
      ||
seq2  GG  1133