BAC Information

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BAC

Clone NameB6Ng01-095M01
ChromosomeX (Build37)
Map Location 77,252,116 - 77,253,260
singlet/doubletsinglet
Overlap genenone
Upstream geneEG629116, LOC636082, EG667736, LOC100041373, EG636104, 2410003J06Rik, LOC667749, LOC211702, LOC667755
Downstream geneLOC211705, LOC654474, LOC629153, LOC546338, LOC100042229, LOC667776, EG629182
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-095M01.bB6Ng01-095M01.g
ACCDH906606DH906607
length1,1021,192
definitionDH906606|Mus musculus domesticus DNA, BAC clone: B6Ng01-095M01, 5' end.DH906607|Mus musculus domesticus DNA, BAC clone: B6Ng01-095M01, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcacaaatggagagctgttaggagcagatttttctcaacaacaagt
gaataaataacattaaataagatattctgtggatttctgatgtttttgaa
aaccaaatatctatgtatcaaaatagtgtactgctacacactcataaaat
ataaatgctatttttacgtactttaaaaataatgtttgtggaaatagcat
gaaagtatttcagatgccaatagcaggaatacaaactaaaactatatttt
aatagcattttactattcacataacagaatctatgatgtttatttactgt
aacagtatttcttctaattcattggagatcatttattatatttaaactgt
tcaataaacattactttaataatttgagtaatttttatacagtatatttt
ttacaatgttgataacctgtttttcacttcttattattgtaatagattat
tgacactagattattggcaatgagaattttgtggaatactacttacttta
attttatttcctcaagtctatgccagtagcaaatattcaggaggtctcaa
caaatgactactgaaaataaactgattaaatgtatatcataggttttatt
atgtccagaaaattcattctcatactaatgataatggaaaaaagaacacc
atgctattttctttcccaaccccatcacctccgtatcagtgtaagcacaa
atgaaggaccacatattggttatattattgtaaatgttataaatctaatt
cagttttttagagtctatccacatagactgttcattcaagtcattgtctg
taggtaagttattttcttctttagtttcagtagagagtaaataagtgcta
gaaaatattattttcttatggcctggaaaggaatacatgttgcttctttc
tttctttcctttcttttccttctttctttcttcttcttcttcttcttctt
cttcttcaaagcatacagataagatagcttttgacatagaatatatatca
ttcttgaaatgtactgtgttctttccctttaagaatctgtagagactgaa
acatttcttaacaggtcctcatattgttgtgagagctaataatatttgaa
aa
gaattctttctttatgtcctctaccatcatcatgagatatgcttttaaat
ccaggtctaccttttcaggtgtgttagggtgtcctggattgggcgaagtg
ggcgttctgggttctgatgatggtgagtggtcctggcttctgttagtagg
attcttacgtttacctttcgccatctggcaatctctggagttagttgtta
tagttgtctttgttaagagattgttcctctgttgattttgttaccctcta
tcagcaggcgtgggagacaagctctcttctctgagtttcagtggtcagag
cagtctctgtaggcaagctctcctctttcagggaaggtgtacagttatct
ggtgtttggacctcctcctggctgaaggtgaaggcccaaaacaggatctt
tcccagaagctgtgttgctttggccaggaaggtggccagttgtctggagt
cgaagatgtcgccgcctcagaagctctgtggctcttgtccggaaggaggc
cgaccgtctggagctgaagatggtgccgccccagaatctctgtgactctc
tcgcccgtcccagaaatggctggcactctgtattccacagggtcacccgt
gcagcctgccctccgcggagtctcggagccaagaaggttcccgccggcgc
ctgtgccacaaacctctcaggccgggcagacccccgtgctctcaccagga
aggtggccggctatctggagctgaagatggcgccgccccagaagctctgc
gactctcgcccgtcccagaaatggctggcactctgtattccacccggtca
cccgtgcagcctgccctccgcggagtcccgggagccaagaaaggctcctg
ccggcgcctgtgccacaaacctctcagccgggcagacccccgtgctctca
ccaggaaagtgccgctgtctggagctgaagatggcgccgccccagagctc
tgcgactcttgcccgtcccagaaatggctggcactctgtatccacacgtc
caccgtgcagcctgccctcgcgaagtcttcgaacaagaagttctgcgcgc
ttgtgtccacaaaccttctcaagcggcagaaccctgcttcacaagaggtg
ccgcctatctggaactgaaatgcgcctcaagcttgactgcgtccaaatgc
tgaccgaattcaccggtcaccggtgagactgttccttcgtcg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_77252116_77253260
seq2: B6Ng01-095M01.b_44_1145 (reverse)

seq1  TTTTCCAAATATATATTTAAGCTCTCACAACAAATTATGAGGAACTGTTA  50
       ||| ||||||| ||||  ||||||||||||||  |||||||| ||||||
seq2  -TTTTCAAATAT-TATT--AGCTCTCACAACAA--TATGAGGACCTGTTA  44

seq1  AAGAAAATGTTTCAGTCTCTACAAGATTTCTGTAAAAGGGAAAGAACACA  100
      |   |||||||||||||||||| ||||   | | ||||||||||||||||
seq2  A--GAAATGTTTCAGTCTCTAC-AGAT---TCTTAAAGGGAAAGAACACA  88

seq1  GTACATTTCAAAGAAATGATATATATTTCTATGTCAAAAAGCTATCTGTA  150
      |||||||||||   ||||||||||| ||||||||| ||||||||||| ||
seq2  GTACATTTCAA--GAATGATATATA-TTCTATGTC-AAAAGCTATCT-TA  133

seq1  TCTGGTAATGCTTTTGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAA  200
      ||||   |||||||  | ||||                   | ||||| |
seq2  TCTG--TATGCTTTGAAGAAGA-------------------AGAAGAAGA  162

seq1  GAAAAGAAAAGAAAAGAAAAGAAAGGAAAAGAAAGGAAAAGAAAAGAAAA  250
       | ||||| |  |||||||   |||||||||||||| |||||||   |||
seq2  -AGAAGAAGAAGAAAGAAA--GAAGGAAAAGAAAGG-AAAGAAA--GAAA  206

seq1  GAAGCAACATGTATTCC-TTCCAGGCCATAAGAAAATAATATTTTCTAGC  299
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  GAAGCAACATGTATTCCTTTCCAGGCCATAAGAAAATAATATTTTCTAGC  256

seq1  ACTTATTTACTCTCTACTGAAACTAAAGAAGAAAATAACTTACCTACAGA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTATTTACTCTCTACTGAAACTAAAGAAGAAAATAACTTACCTACAGA  306

seq1  CAATGACTTGAATGAACAGTCTATGTGGATAGACTCTAAAAAACTGAATT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGACTTGAATGAACAGTCTATGTGGATAGACTCTAAAAAACTGAATT  356

seq1  AGATTTATAACATTTACAATAATATAACCAATATGTGGTCCTTCATTTGT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTTATAACATTTACAATAATATAACCAATATGTGGTCCTTCATTTGT  406

seq1  GCTTACACTGATACGGAGGTGATGGGGTTGGGAAAGAAAATAGCATGGTG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTACACTGATACGGAGGTGATGGGGTTGGGAAAGAAAATAGCATGGTG  456

seq1  TTCTTTTTTCCATTATCATTAGTATGAGAATGAATTTTCTGGACATAATA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTTTTCCATTATCATTAGTATGAGAATGAATTTTCTGGACATAATA  506

seq1  AAACCTATGATATACATTTAATCAGTTTATTTTCAGTAGTCATTTGTTGA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCTATGATATACATTTAATCAGTTTATTTTCAGTAGTCATTTGTTGA  556

seq1  GACCTCCTGAATATTTGCTACTGGCATAGACTTGAGGAAATAAAATTAAA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCTCCTGAATATTTGCTACTGGCATAGACTTGAGGAAATAAAATTAAA  606

seq1  GTAAGTAGTATTCCACAAAATTCTCATTGCCAATAATCTAGTGTCAATAA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGTAGTATTCCACAAAATTCTCATTGCCAATAATCTAGTGTCAATAA  656

seq1  TCTATTACAATAATAAGAAGTGAAAAACAGGTTATCAACATTGTAAAAAA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATTACAATAATAAGAAGTGAAAAACAGGTTATCAACATTGTAAAAAA  706

seq1  TATACTGTATAAAAATTACTCAAATTATTAAAGTAATGTTTATTGAACAG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACTGTATAAAAATTACTCAAATTATTAAAGTAATGTTTATTGAACAG  756

seq1  TTTAAATATAATAAATGATCTCCAATGAATTAGAAGAAATACTGTTACAG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAATATAATAAATGATCTCCAATGAATTAGAAGAAATACTGTTACAG  806

seq1  TAAATAAACATCATAGATTCTGTTATGTGAATAGTAAAATGCTATTAAAA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATAAACATCATAGATTCTGTTATGTGAATAGTAAAATGCTATTAAAA  856

seq1  TATAGTTTTAGTTTGTATTCCTGCTATTGGCATCTGAAATACTTTCATGC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGTTTTAGTTTGTATTCCTGCTATTGGCATCTGAAATACTTTCATGC  906

seq1  TATTTCCACAAACATTATTTTTAAAGTACGTAAAAATAGCATTTATATTT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTCCACAAACATTATTTTTAAAGTACGTAAAAATAGCATTTATATTT  956

seq1  TATGAGTGTGTAGCAGTACACTATTTTGATACATAGATATTTGGTTTTCA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGAGTGTGTAGCAGTACACTATTTTGATACATAGATATTTGGTTTTCA  1006

seq1  AAAACATCAGAAATCCACAGAATATCTTATTTAATGTTATTTATTCACTT  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACATCAGAAATCCACAGAATATCTTATTTAATGTTATTTATTCACTT  1056

seq1  GTTGTTGAGAAAAATCTGCTCCTAACAGCTCTCCATTTGTGAATTC  1145
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTTGAGAAAAATCTGCTCCTAACAGCTCTCCATTTGTGAATTC  1102