BAC Information

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BAC

Clone NameB6Ng01-100J15
ChromosomeX (Build37)
Map Location 61,532,073 - 61,533,208
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC666729, EG627470, 3830417A13Rik, Slitrk4
Downstream geneLOC100040011, Ctag2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-100J15.bB6Ng01-100J15.g
ACCDH910047DH910048
length1,1191,167
definitionDH910047|Mus musculus domesticus DNA, BAC clone: B6Ng01-100J15, 5' end.DH910048|Mus musculus domesticus DNA, BAC clone: B6Ng01-100J15, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctacaggcaagcatatgctataattgattgaaaattaaggctcc
aattatctgtggaacaaaccaaattaaacaagtaaacaaaaatcaatggg
caatgattgcttcgtattattcttcaataatatcctatcttctatattat
ctatatacttgactatttctggttttagtttttcttttttgtcatttcac
ctaattatattcatgcaaatacttgaacacatcatgtttaagagagatgc
atggacaatatttaaacatgtaaatagatatgacttttttctttatgcaa
ccttcataaagaactcctcctccatctatactctccattgacttgatttt
tttttaatcctcttctcttttgaaaacaacctacaggcagaaattgagtg
ggcagcagtggtaaaattcgttacatccattgtgaaacccagtatgaaat
aatgattagttaaagacacactaaaagatcagtccacagtatttgtactg
gcatatcttcactgaggtgaaacgtgtttcctccctagatatcagcaaca
atatgttgaaaaatttccccactgttgtacatttgattaaaacagatcct
gctaattaagaactcaaatttgcattacattgcatagtgcattttacaac
taactagtaatggctaacaaaacaatttggcatttactttaaatgcaaag
aattcgggaagctaccatgtattttatcacggtaggtgaagtgtttgttc
tttgctataaaggttaaagagattcagcagaatggacactttttgcctga
aaatgtaatgtaagtttcaagttctgggatagctcaaaaggccagagatg
gacagtaaataccagattatttaaatgttcatcttaatcaacttttgaaa
ctgtccttaggcttagtatacttaactgcaataaatatgaaaaattctgt
ttacacaagtatgaagagagcagtctgaagcaaaaacacccagacactgg
aaaatgcaatatatactagactgtattggtgattttatattcagcaactc
acaaaatgaatatttaaataacaatcattctgtttaaatataaatggtat
cgtaaaaagaggtaatagc
gaattctcagctgaggaataccgaatggcagagaagcacatgaaaaaatg
ttcaacatccttaatcatcagggaaatgtaaatgaaaataatcctgagtt
tccatcacacacaagtcagaatggttgagatcaaaaattcaggtgacagc
agatgctggcaaggatgtggagaaagaggaacactccattgttggtggga
ttgcaagcttgtacaaccactctggaagtcagtctggaggttcctctgaa
aattggacattttattactggaggatcccgcaatacctctctgggcatat
atacagaagatgttccaactggtaagaaggacacatgctccactatgttc
atagcagccttatttataatagccagaagctggaaagaacccagatgccc
ctcaacagaggaatgatacagaaaatgtggtacatttacacaatggagta
ctactcagctattaaaaagaatgaatttatggaattcctagcaaatggat
ggacctggagggcatcatcctgagcgagataacccaatcacaaaagactt
cacacaatatgtactcactgacaagtgggtattagcccagaaacttagga
tacccaagatatgtgatacattttgctaaacacatgaatctcaagaagaa
tgaagaccaaagtgtggacactttgccccttcttagaattgggaacaaaa
cacccatggaaggagttacagagacaaagtttggagctaagacgaaagga
tggataatctagagactgccatatctgggaatccatcccataatcagcct
ccaaacgctgacaccattgcatacactagcaagattttgctgaaaggacc
cagatagagttgtctcttgtgagactatgctggggcctagcaaacacaga
tgtggatgctcacagtcagctattggatggatcacagggccccaatcgag
gagctagagaagtatccaggagctaaagggatctgcatcttataggtgga
acaaaattatgaactactagtagcccctggagctcgtgtctctagctgcg
tttgaatcagaaaatggcctagtcagcatcagtggtaaagaagagcccat
tagctggcaacttttatgcctcagatacggggatgaacagggcagaatgg
gatggggtgggggaact
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_61532073_61533208
seq2: B6Ng01-100J15.b_44_1162

seq1  GAATTCCTACAGGCAAGCATATGCTATAATTGATTGAAAATTAAGGCTCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTACAGGCAAGCATATGCTATAATTGATTGAAAATTAAGGCTCC  50

seq1  AATTATCTGTGGAACAAACCAAATTAAACAAGTAAACAAAAATCAATGGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTATCTGTGGAACAAACCAAATTAAACAAGTAAACAAAAATCAATGGG  100

seq1  CAATGATTGCTTCGTATTATTCTTCAATAATATCCTATCTTCTATATTAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGATTGCTTCGTATTATTCTTCAATAATATCCTATCTTCTATATTAT  150

seq1  CTATATACTTGACTATTTCTGGTTTTAGTTTTTCTTTTTTGTCATTTCAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATATACTTGACTATTTCTGGTTTTAGTTTTTCTTTTTTGTCATTTCAC  200

seq1  CTAATTATATTCATGCAAATACTTGAACACATCATGTTTAAGAGAGATGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATTATATTCATGCAAATACTTGAACACATCATGTTTAAGAGAGATGC  250

seq1  ATGGACAATATTTAAACATGTAAATAGATATGACTTTTTTCTTTATGCAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGACAATATTTAAACATGTAAATAGATATGACTTTTTTCTTTATGCAA  300

seq1  CCTTCATAAAGAACTCCTCCTCCATCTATACTCTCCATTGACTTGATTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCATAAAGAACTCCTCCTCCATCTATACTCTCCATTGACTTGATTTT  350

seq1  TTTTTAATCCTCTTCTCTTTTGAAAACAACCTACAGGCAGAAATTGAGTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTAATCCTCTTCTCTTTTGAAAACAACCTACAGGCAGAAATTGAGTG  400

seq1  GGCAGCAGTGGTAAAATTCGTTACATCCATTGTGAAACCCAGTATGAAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGCAGTGGTAAAATTCGTTACATCCATTGTGAAACCCAGTATGAAAT  450

seq1  AATGATTAGTTAAAGACACACTAAAAGATCAGTCCACAGTATTTGTACTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGATTAGTTAAAGACACACTAAAAGATCAGTCCACAGTATTTGTACTG  500

seq1  GCATATCTTCACTGAGGTGAAACGTGTTTCCTCCCTAGATATCAGCAACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATATCTTCACTGAGGTGAAACGTGTTTCCTCCCTAGATATCAGCAACA  550

seq1  ATATGTTGAAAAATTTCCCCACTGTTGTACATTTGATTAAAACAGATCCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGTTGAAAAATTTCCCCACTGTTGTACATTTGATTAAAACAGATCCT  600

seq1  GCTAATTAAGAACTCAAATTTGCATTACATTGCATAGTGCATTTTACAAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAATTAAGAACTCAAATTTGCATTACATTGCATAGTGCATTTTACAAC  650

seq1  TAACTAGTAATGGCTAACAAAACAATTTGGCATTTACTTTAAATGCAAAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTAGTAATGGCTAACAAAACAATTTGGCATTTACTTTAAATGCAAAG  700

seq1  AATTCGGGAAGCTACCATGTATTTTATCACGGTAGGTGAAGTGTTTGTTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCGGGAAGCTACCATGTATTTTATCACGGTAGGTGAAGTGTTTGTTC  750

seq1  TTTGCTATAAAGGTTAAAGAGATTCAGCAGAATGGACACTTTTTGCCTGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCTATAAAGGTTAAAGAGATTCAGCAGAATGGACACTTTTTGCCTGA  800

seq1  AAATGTAATGTAAGTTTCAAGTTCTGGGATAGCTCAAAAGGCCAGAGATG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGTAATGTAAGTTTCAAGTTCTGGGATAGCTCAAAAGGCCAGAGATG  850

seq1  GACAGTAAATACCAGATTATTTAAATGTTCATCTTTATTCAACTTTTGAA  900
      ||||||||||||||||||||||||||||||||| ||| ||||||||||||
seq2  GACAGTAAATACCAGATTATTTAAATGTTCATC-TTAATCAACTTTTGAA  899

seq1  ACTGTCCTTAGGCTTAGTTATACTTAACTGCAATAAATATGAAAAATTCT  950
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  ACTGTCCTTAGGCTTAG-TATACTTAACTGCAATAAATATGAAAAATTCT  948

seq1  GTTTTACACAAGTATGAAGAGAGCAGTCTGAAAGCAAAAACACCCAGAAC  1000
      | |||||||||||||||||||||||||||| |||||||||||||||| ||
seq2  G-TTTACACAAGTATGAAGAGAGCAGTCTG-AAGCAAAAACACCCAG-AC  995

seq1  ACTGGAAAATTGCAATTAATATTACTAAGACTGTATTGGTGA-TTTATAT  1049
      ||||||||| ||||||  ||| |||| ||||||||||||||| |||||||
seq2  ACTGGAAAA-TGCAAT--ATA-TACT-AGACTGTATTGGTGATTTTATAT  1040

seq1  TCAGCAACTCACAAAAATGAATATTTTAAAATAACATATCATTCTGTTTA  1099
      |||||||||||| |||||||||||||  |||||||| |||||||||||||
seq2  TCAGCAACTCAC-AAAATGAATATTT--AAATAACA-ATCATTCTGTTTA  1086

seq1  AAAATATTAAATGGTATCGTAAAATAGAGGTAATAGC  1136
      || |   ||||||||||||||||| ||||||||||||
seq2  AATA---TAAATGGTATCGTAAAA-AGAGGTAATAGC  1119