BAC Information

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BAC

Clone NameB6Ng01-101K12
ChromosomeX (Build37)
Map Location 127,572,943 - 127,697,546
singlet/doubletdoublet
Overlap genenone
Upstream geneDiap2, LOC100040092, LOC665773
Downstream geneLOC665799, LOC670449, LOC245600
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-101K12.bB6Ng01-101K12.g
ACCDH910773DH910774
length1,0501,090
definitionDH910773|Mus musculus domesticus DNA, BAC clone: B6Ng01-101K12, 5' end.DH910774|Mus musculus domesticus DNA, BAC clone: B6Ng01-101K12, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(127,696,534 - 127,697,546)(127,572,943 - 127,574,054)
sequence
gaattctttgtttagcgttgtatcccacgtttaatagggttatttggttc
tctggagtctaactttttgagttctttgtatatattggatattagccctc
tatcagatgtggagttgggaaagatcttttcccaatatgttggctgcctt
tttgtcctattgatagtgtcctttgccttatagaagtattgcaattttat
gaggtcctattttgtctattgttgatcttaaagcataaggcattggtgtt
ctgttcaggaaatttccccctgtgctcatgtatttgaggctcttcgccac
tttctgttctattagtttcagtgtgtctggttttgtgtggaggtccttaa
tccacttggacttgagttttgtacaaggagataaaaatgtacacctatgg
tcacttggtctttgacaaaggagctaaaaccatccagtggaaaaaagaca
gcattttcaacaaatgatgctcatttaagtggtggtcagcatgtagaaga
atgcaaagccatacatgcttatctctttggaaaagtacctctattctcta
tttcttcatgtgaaccataagagctttttgaagtaaaatcaattcatttg
ctttgagaaactgtcattaaaattttgtcaacttgactagagtttggggt
gaccagattaaataatatttgtaagtatgtctttcagattgtttccagat
gagattagcatttgaatctatagactgggtgaaaaagaatgcttttccca
aagcaggtgtatacatctgatgagatctagagaagacaagaggaatagga
aatttcctcttattttcctgtcagcatgagagaagatgtttacctttcgt
ttatgttctcctgccctccactaaaacattaatcatttgtcctttattgt
cacaaatatgtcactgattttccatgatagatcatggcctattgaagtct
ttgtaaatgaggaccaatcctttacttatactttgaatgtgcatgtaaca
tttcatttatttattaattatatttatttatttatggaatagtaaggaaa

gaattcttaaacttttgcatattgcaattacaaatataacttcctccctt
tagtactaatatgaattatgggtgtgtgctgaagcaaaagtgaaagtcca
tgacaatgagactattgagttaatttagcaacttagagtcttatcttttt
ttttttttttttactaacttcccactcatttccttatgtatttttcttaa
tgtagtaaatgcaaaaggaaacatttatacattcactggtctgtccatag
agaaatttgaattttataacgaagccttaatgttatatatatatgaaaga
agtaccttaaaattgcctgaccattcattttctattagagttattcaaaa
tagttagttttgatttattggcttcaaattttcctttgattaatgcaaat
aacaaatgtctatttattatattttttcattatcttcattgataccgttc
agtatcttttcatattccactaaaatctatttccttgttcatattcagtt
gtattaaatacaagtaattgaaattgccgtctcaaatatcctgctttccc
tataattaatattcacaatgttcagaacatatattgctttattagtaacc
agattcactttggcatttttaattcaaggggttacaaagcaagggacata
gtaagtaccacataggttatgacatctttaagtccatagcttgatgattc
tacatatgaattaagttagcattaaaaaaatctgtcctaaaaacttataa
aatatacatggccctgtgtgtgctaataaaacaaagtacatttggatatt
gtagggaaaattttttcatctacttgaagaaaactagaaataattcattg
gtgttaagcaatattagaatatagaaaagaagggttggagaagacaaact
aacatttattaacttatatgcacttcttctgccgaacatctaagtagttt
tgtttcactgatctcattatgctgttttttcataagtctggcacataaag
agagaaaatgtattaaaaagtagattggcttaagaaaaataagaggaccg
tgataaattataattatattggagacattaagaatctgag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_127696534_127697546
seq2: B6Ng01-101K12.b_77_1081 (reverse)

seq1  TCCATAAATAAATAAATAAATAAATAAATAAATAAATGAAATGTTTACAT  50
      ||||||||||||||||||    ||| ||||||||||||||||| ||||||
seq2  TCCATAAATAAATAAATA---TAATTAATAAATAAATGAAATG-TTACAT  46

seq1  GCACATTCAAAGTATAAGTAAAGGATTGGTCCCTTCATTTACAAAGACTT  100
      ||||||||||||||||||||||||||||||||  ||||||||||||||||
seq2  GCACATTCAAAGTATAAGTAAAGGATTGGTCC--TCATTTACAAAGACTT  94

seq1  CAATAGGCCATGATCTATCATGGAAAATCAGTGACATATTTGTGACAATT  150
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  CAATAGGCCATGATCTATCATGGAAAATCAGTGACATATTTGTGACAA-T  143

seq1  AAAGGACAAATGATTAATGTTTTAGTGGAGGGCAGGAGAACATAAACGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGACAAATGATTAATGTTTTAGTGGAGGGCAGGAGAACATAAACGAA  193

seq1  AGGTAAACATCTTCTCTCATGCTGACAGGAAAAATAAGAGGAAATTTCCT  250
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  AGGTAAACATCTTCTCTCATGCTGACAGG-AAAATAAGAGGAAATTTCCT  242

seq1  ATTCCTCTTGTCTTCTCTAGATCTCATCAGATGTATACACCTGCTTTGGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCTCTTGTCTTCTCTAGATCTCATCAGATGTATACACCTGCTTTGGG  292

seq1  AAAAGCATTCTTTTTCACCCAGTCTATAGATTCAAATGCTAATCTCATCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGCATTCTTTTTCACCCAGTCTATAGATTCAAATGCTAATCTCATCT  342

seq1  GGAAACAATCTGAAAGACATACTTACAAATATTATTTAATCTGGTCACCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAACAATCTGAAAGACATACTTACAAATATTATTTAATCTGGTCACCC  392

seq1  CAAACTCTAGTCAAGTTGACAAAATTTTAATGACAGTTTCTCAAAGCAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACTCTAGTCAAGTTGACAAAATTTTAATGACAGTTTCTCAAAGCAAA  442

seq1  TGAATTGATTTTACTTCAAAAAGCTCTTATGGTTCACATGAAGAAATAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATTGATTTTACTTCAAAAAGCTCTTATGGTTCACATGAAGAAATAGA  492

seq1  GAATAGAGGTACTTTTCCAAAGAGATAAGCATGTATGGCTTTGCATTCTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATAGAGGTACTTTTCCAAAGAGATAAGCATGTATGGCTTTGCATTCTT  542

seq1  CTACATGCTGACCACCACTTAAATGAGCATCATTTGTTGAAAATGCTGTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACATGCTGACCACCACTTAAATGAGCATCATTTGTTGAAAATGCTGTC  592

seq1  TTTTTTCCACTGGATGGTTTTAGCTCCTTTGTCAAAGACCAAGTGACCAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTCCACTGGATGGTTTTAGCTCCTTTGTCAAAGACCAAGTGACCAT  642

seq1  AGGTGTACATTTTTATCTCCTTGTACAAAACTCAAGTCCAAGTGGATTAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGTACATTTTTATCTCCTTGTACAAAACTCAAGTCCAAGTGGATTAA  692

seq1  GGACCTCCACACAAAACCAGACACACTGAAACTAATAGAACAGAAAGTGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACCTCCACACAAAACCAGACACACTGAAACTAATAGAACAGAAAGTGG  742

seq1  CGAAGAGCCTCAAATACATGAGCACAGGGGGAAATTTCCTGAACAGAACA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAAGAGCCTCAAATACATGAGCACAGGGGGAAATTTCCTGAACAGAACA  792

seq1  CCAATGCCTTATGCTTTAAGATCAACAATAGACAAAATAGGACCTCATAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATGCCTTATGCTTTAAGATCAACAATAGACAAAATAGGACCTCATAA  842

seq1  AATTGCAATACTTCTATAAGGCAAAGGACACTATCAATAGGACAAAAAGG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGCAATACTTCTATAAGGCAAAGGACACTATCAATAGGACAAAAAGG  892

seq1  CAGCCAACATATTGGGAAAAGATCTTTCCCAACTCCACATCTGATAGAGG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCAACATATTGGGAAAAGATCTTTCCCAACTCCACATCTGATAGAGG  942

seq1  GCTAATATCCAATATATACAAAGAACTCAAAAAGTTAGACTCCAGAGAAC  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAATATCCAATATATACAAAGAACTCAAAAAGTTAGACTCCAGAGAAC  992

seq1  CAAATAACCCTAT  1013
      |||||||||||||
seq2  CAAATAACCCTAT  1005

seq1: chrX_127572943_127574054
seq2: B6Ng01-101K12.g_68_1157

seq1  GAATTCTTAAACTTTTGCATATTGCAATTACAAATATAACTTCCTCCCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTAAACTTTTGCATATTGCAATTACAAATATAACTTCCTCCCTT  50

seq1  TAGTACTAATATGAATTATGGGTGTGTGCTGAAGCAAAAGTGAAAGTCCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTACTAATATGAATTATGGGTGTGTGCTGAAGCAAAAGTGAAAGTCCA  100

seq1  TGACAATGAGACTATTGAGTTAATTTAGCAACTTAGAGTCTTATCTTTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACAATGAGACTATTGAGTTAATTTAGCAACTTAGAGTCTTATCTTTTT  150

seq1  TTTTTTTTTTTTACTAACTTCCCACTCATTTCCTTATGTATTTTTCTTAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTTTTACTAACTTCCCACTCATTTCCTTATGTATTTTTCTTAA  200

seq1  TGTAGTAAATGCAAAAGGAAACATTTATACATTCACTGGTCTGTCCATAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGTAAATGCAAAAGGAAACATTTATACATTCACTGGTCTGTCCATAG  250

seq1  AGAAATTTGAATTTTATAACGAAGCCTTAATGTTATATATATATGAAAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATTTGAATTTTATAACGAAGCCTTAATGTTATATATATATGAAAGA  300

seq1  AGTACCTTAAAATTGCCTGACCATTCATTTTCTATTAGAGTTATTCAAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTACCTTAAAATTGCCTGACCATTCATTTTCTATTAGAGTTATTCAAAA  350

seq1  TAGTTAGTTTTGATTTATTGGCTTCAAATTTTCCTTTGATTAATGCAAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTAGTTTTGATTTATTGGCTTCAAATTTTCCTTTGATTAATGCAAAT  400

seq1  AACAAATGTCTATTTATTATATTTTTTCATTATCTTCATTGATACCGTTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAATGTCTATTTATTATATTTTTTCATTATCTTCATTGATACCGTTC  450

seq1  AGTATCTTTTCATATTCCACTAAAATCTATTTCCTTGTTCATATTCAGTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATCTTTTCATATTCCACTAAAATCTATTTCCTTGTTCATATTCAGTT  500

seq1  GTATTAAATACAAGTAATTGAAATTGCCGTCTCAAATATCCTGCTTTCCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTAAATACAAGTAATTGAAATTGCCGTCTCAAATATCCTGCTTTCCC  550

seq1  TATAATTAATATTCACAATGTTCAGAACATATATTGCTTTATTAGTAACC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAATTAATATTCACAATGTTCAGAACATATATTGCTTTATTAGTAACC  600

seq1  AGATTCACTTTGGCATTTTTAATTCAAGGGGTTACAAAGCAAGGGACATA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTCACTTTGGCATTTTTAATTCAAGGGGTTACAAAGCAAGGGACATA  650

seq1  GTAAGTACCACATAGGTTATGACATCTTTAAGTCCATAGCTTGATGATTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGTACCACATAGGTTATGACATCTTTAAGTCCATAGCTTGATGATTC  700

seq1  TACATATGAATTAAGTTAGCATTAAAAAAATCTGTCCTAAAAACTTATAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATATGAATTAAGTTAGCATTAAAAAAATCTGTCCTAAAAACTTATAA  750

seq1  AATATACATGGCCCTGTGTGTGCTAATAAAACAAAGTACATTTGGATATT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATACATGGCCCTGTGTGTGCTAATAAAACAAAGTACATTTGGATATT  800

seq1  GTAGGGAAAATTTTTTCATCTACTTGAAGAAAACTTAGAAATAATTCATT  850
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  GTAGGGAAAATTTTTTCATCTACTTGAAGAAAAC-TAGAAATAATTCATT  849

seq1  GATGTTAAGCAAATATTAGAATATAGAAAAGAAGGGATGGAGAAGACAAA  900
      | |||||||| ||||||||||||||||||||||||| |||||||||| ||
seq2  GGTGTTAAGC-AATATTAGAATATAGAAAAGAAGGGTTGGAGAAGAC-AA  897

seq1  ACTAACATTTATTAACTTATATGCAACTTCTTCTGCCGAACATCTAAGTA  950
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  ACTAACATTTATTAACTTATATGC-ACTTCTTCTGCCGAACATCTAAGTA  946

seq1  GTTTTGTTTCCACTGATCTCATTATGCTGTTTTATTCATAAAGTCTGGCA  1000
      ||||||||| ||||||||||||||||||||||| ||||| ||||||||||
seq2  GTTTTGTTT-CACTGATCTCATTATGCTGTTTT-TTCAT-AAGTCTGGCA  993

seq1  CATAAAGAAGAGAAAAAGGTATTAAAAAAAGTAAGATTGGCTTAAAGAAA  1050
      ||||||| |||| |||| |||||  ||||||| |||||||||| ||||||
seq2  CATAAAG-AGAG-AAAATGTATT--AAAAAGT-AGATTGGCTT-AAGAAA  1037

seq1  AAAATAAAGAGGAACAGTTGATAATATTTATAATTATAATGGGAAGACAT  1100
      ||    ||||||| |   |||||  | ||||||||||| |||  ||||||
seq2  AA---TAAGAGGACC--GTGATA--AATTATAATTATATTGG--AGACAT  1078

seq1  AAAGAATCTGAG  1112
       |||||||||||
seq2  TAAGAATCTGAG  1090