BAC Information

Click to search

BAC

Clone NameB6Ng01-103O19
ChromosomeX (Build37)
Map Location 24,965,995 - 24,967,125
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC629204, EG546272, LOC100043216, EG546282, LOC100040417, LOC100040428, LOC100040433, Xmr, LOC100038968
Downstream geneLOC100038977, LOC100038997, LOC664810, EG382275, LOC100039030, LOC100039065, LOC100039078, LOC100039003, Slx
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-103O19.bB6Ng01-103O19.g
ACCDH912370DH912371
length1,1271,203
definitionDH912370|Mus musculus domesticus DNA, BAC clone: B6Ng01-103O19, 5' end.DH912371|Mus musculus domesticus DNA, BAC clone: B6Ng01-103O19, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcatcaggttctcaagaaacaacacagatcatagccatcaccaggg
tctcaattagcaacaggaataaaagaccccatcatgattgctggtcatag
ctgcatcactgacttcaaaatagcttcaggtttccagcatgatcacaagt
atcaatatttatcacatgttagatattgtgaactacacatatacatgaga
aataccaactgatgatcctgttgcaggtaggtttccagattttaatctga
tctccagaaccagataagaatacttccctcaaaataaacttgggcattat
tgtggaccttgaggttcattatattttcaagcagtagcacagatcatagc
caccactagggtttccattagcaataggaataaaatcaaacttggactcc
atcaaaattgctgatcacagcatacatcactggcatcaacatagttttct
tttttttttacaggtagaatcataataatgaaaataccatacatgtttca
caacaggagctacatgaatgcatcagggacatcaacagaacttcctgtgg
tgggtaggatctcagacatcaattttctatccagtgtcagataacaacac
ttacctcaatatggcattgtgtatcagcatttaccttggaattcagcagt
ttctccagaaacaacactgctcataaccattaccagggtctccattaata
ataggaaattcatgtaatagataccattatgcatgcttatcacagcaaac
agcaatgatatcagcatagcttcagcattcagatgtgatcactgacatca
aagggaacttcaataacagtacacaactcttttgtcattataaacttagg
cagcagtactgacaatgatgttcacaatagatatttatgattggggcatc
tcaggtgtcatggaccccttcaaaggtaacacttgttgaaacaccatgcc
tgctacaactctgactataaatctcacatggttacagtgacatcatggat
gaatgactatatggcctttggatctctgatgtcattattagttcaaagta
agagcagcttcactttgcttggggtcttcttggtgttcattattagtcta
aagtggggagtaagattcacccttaac
gaattcatggaaaaaggaggcaacttcaacagatactactggtctaactg
gatgtctgcatgtagaataatgcaaatagatccacatatatcatgcacaa
aactgaagtacaaatggaccaaagacctcaacattaatcagatacactaa
atctcatagaagagatagtaggaaataggttcaacacattggtacaggaa
acaagttcctgaacagaacaccaatacttcaggctctaagatcaagaact
gataaatgggacctcatgaaactggaaagattctgtaaaccaaaggacat
agcccatagtacaaatcagcaacctacacattatgaaaatttttcactta
acggacatcccatagaggactaatgtccaaaatttaccaaaaactcaaga
agttaacctccaaaaaaccaaataacctaggtgaaaaattaggtactgat
aattcacagcagaagaatcttaaatggccaagaagcacttaaagaaatgt
tcaatgtgctttgtcattagggaaatgcaaatcaaaccatctctgagatt
ctatcatactatagtcatattgactatcatcacaaattcaattggtaata
catgttagtgaggatgtggatcaaggggaacatacctcaattgctggtgg
aactgcaaacttctgcataaacattggaaataaatttggtgtttcttaga
aaactgtatatattcttttcaagttctattcaagagccagctataccact
cctgtgcatatacccaaaagatactccactgtccccaaaaggacacttgc
tcaaccatgctcatagctttattcataatagccagaaactgggaaacagc
ctagatgtccctcaactgacaaatggataaagaaaatgtgacacatctac
acaggggaatactatagagctattaaaaacaaacacatcatggatttgta
ggaaaatagatggaatggagatatcatactgagcttgtttaacccagacc
ccaaaggacatgtatggcatgtagtcacttatagtttgaaatagtcttaa
aagaacagaaataaaattgcctgtactcccaacggactcaggaagcttat
caagaggaatagaaaggtgagggagtgctgaatctcactaaaaaatccat
gggcagcgaatgtgccaaaataggtgaagtgagaaaaaaaaatggggtta
ctc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_24965995_24967125
seq2: B6Ng01-103O19.b_46_1172

seq1  GAATTCATCAGGTTCTCAAGAAACAACACAGATCATAGCCATCACCAGGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATCAGGTTCTCAAGAAACAACACAGATCATAGCCATCACCAGGG  50

seq1  TCTCAATTAGCAACAGGAATAAAAGACCCCATCATGATTGCTGGTCATAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAATTAGCAACAGGAATAAAAGACCCCATCATGATTGCTGGTCATAG  100

seq1  CTGCATCACTGACTTCAAAATAGCTTCAGGTTTCCAGCATGATCACAAGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCATCACTGACTTCAAAATAGCTTCAGGTTTCCAGCATGATCACAAGT  150

seq1  ATCAATATTTATCACATGTTAGATATTGTGAACTACACATATACATGAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAATATTTATCACATGTTAGATATTGTGAACTACACATATACATGAGA  200

seq1  AATACCAACTGATGATCCTGTTGCAGGTAGGTTTCCAGATTTTAATCTGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACCAACTGATGATCCTGTTGCAGGTAGGTTTCCAGATTTTAATCTGA  250

seq1  TCTCCAGAACCAGATAAGAATACTTCCCTCAAAATAAACTTGGGCATTAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCAGAACCAGATAAGAATACTTCCCTCAAAATAAACTTGGGCATTAT  300

seq1  TGTGGACCTTGAGGTTCATTATATTTTCAAGCAGTAGCACAGATCATAGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGACCTTGAGGTTCATTATATTTTCAAGCAGTAGCACAGATCATAGC  350

seq1  CACCACTAGGGTTTCCATTAGCAATAGGAATAAAATCAAACTTGGACTCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCACTAGGGTTTCCATTAGCAATAGGAATAAAATCAAACTTGGACTCC  400

seq1  ATCAAAATTGCTGATCACAGCATACATCACTGGCATCAACATAGTTTTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAAATTGCTGATCACAGCATACATCACTGGCATCAACATAGTTTTCT  450

seq1  TTTTTTTTTACAGGTAGAATCATAATAATGAAAATACCATACATGTTTCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTACAGGTAGAATCATAATAATGAAAATACCATACATGTTTCA  500

seq1  CAACAGGAGCTACATGAATGCATCAGGGACATCAACAGAACTTCCTGTGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAGGAGCTACATGAATGCATCAGGGACATCAACAGAACTTCCTGTGG  550

seq1  TGGGTAGGATCTCAGACATCAATTTTCTATCCAGTGTCAGATAACAACAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTAGGATCTCAGACATCAATTTTCTATCCAGTGTCAGATAACAACAC  600

seq1  TTACCTCAATATGGCATTGTGTATCAGCATTTACCTTGGAATTCAGCAGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACCTCAATATGGCATTGTGTATCAGCATTTACCTTGGAATTCAGCAGT  650

seq1  TTCTCCAGAAACAACACTGCTCATAACCATTACCAGGGTCTCCATTAATA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCCAGAAACAACACTGCTCATAACCATTACCAGGGTCTCCATTAATA  700

seq1  ATAGGAAATTCATGTAATAGATACCATTATGCATGCTTATCACAGCAAAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGAAATTCATGTAATAGATACCATTATGCATGCTTATCACAGCAAAC  750

seq1  AGCAATGATATCAGCATAGCTTCAGCATTCAGATGTGATCACTGACATCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAATGATATCAGCATAGCTTCAGCATTCAGATGTGATCACTGACATCA  800

seq1  AAGGGAACTTCAATAACAGTACACAACTCTTTTGTCATTATAAACTTAGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGAACTTCAATAACAGTACACAACTCTTTTGTCATTATAAACTTAGG  850

seq1  CAGCAGTACTGACAATGATGTTCACAATAGATATTTATGATTGGGGCATC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAGTACTGACAATGATGTTCACAATAGATATTTATGATTGGGGCATC  900

seq1  TCAGGTGTCATGGACCCCTTCAAAGGTAACACTTGTTGAAACACCATGCC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGTGTCATGGACCCCTTCAAAGGTAACACTTGTTGAAACACCATGCC  950

seq1  TGCTACAAACTCTGACTATAAATCTCAACATGGTTACCAGTGACATCATG  1000
      |||||| ||||||||||||||||||| ||||||||| |||||||||||||
seq2  TGCTAC-AACTCTGACTATAAATCTC-ACATGGTTA-CAGTGACATCATG  997

seq1  GATGAATGACTATATGGCCTTTGGGATCTCTGATGTCATTAATTAGTCCA  1050
      |||||||||||||||||||||| ||||||||||||||||| |||||| ||
seq2  GATGAATGACTATATGGCCTTT-GGATCTCTGATGTCATT-ATTAGTTCA  1045

seq1  AAGTAAGAGCAAGCTTCACTTTGCTTTGGGGTCT--CTGGTG-TCATTAA  1097
      |||||||||| ||||||||||||| |||||||||   ||||| ||||| |
seq2  AAGTAAGAGC-AGCTTCACTTTGC-TTGGGGTCTTCTTGGTGTTCATT-A  1092

seq1  TTAGTCTAAAGT-GGGAGTAAGATTCACCCCTAAC  1131
      |||||||||||| ||||||||||||||||| ||||
seq2  TTAGTCTAAAGTGGGGAGTAAGATTCACCCTTAAC  1127